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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR036881
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We have found 37 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 6.617s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
LotjaGi1g1v0123200.2
n.a. Beta-glucosidase; TAIR: AT3G47000.1 Glycosyl hydrolase family protein; Swiss-Prot: sp|A7LXU3|BGH3B_BACO1 Beta-glucosidase BoGH3B; TrEMBL-Plants: tr|A0A151RS31|A0A151RS31_CAJCA Lysosomal beta glucosidase; Found in the gene: LotjaGi1g1v0123200 LjG1.1_chr1 19510945 19519452 +
3 domain predictions
2 GO terms
LotjaGi1g1v0147600.1
n.a. Beta-xylosidase, putative; TAIR: AT1G78060.1 Glycosyl hydrolase family protein; Swiss-Prot: sp|Q9SGZ5|BXL7_ARATH Probable beta-D-xylosidase 7; TrEMBL-Plants: tr|A0A1J7HJ40|A0A1J7HJ40_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0147600 LjG1.1_chr1 25222892 25228713 +
3 domain predictions
2 GO terms
LotjaGi1g1v0245600.1
n.a. Beta-xylosidase, putative; TAIR: AT1G78060.1 Glycosyl hydrolase family protein; Swiss-Prot: sp|Q9SGZ5|BXL7_ARATH Probable beta-D-xylosidase 7; TrEMBL-Plants: tr|G8A378|G8A378_MEDTR Glycoside hydrolase family 3 amino-terminal domain protein; Found in the gene: LotjaGi1g1v0245600 LjG1.1_chr1 58936621 58943674 +
3 domain predictions
2 GO terms
LotjaGi1g1v0270900_LC.1
n.a. Beta xylosidase; TAIR: AT5G64570.1 beta-D-xylosidase 4; Swiss-Prot: sp|A5JTQ2|XYL1_MEDSV Beta-xylosidase/alpha-L-arabinofuranosidase 1; TrEMBL-Plants: tr|A0A151T7T5|A0A151T7T5_CAJCA Beta-D-xylosidase 4; Found in the gene: LotjaGi1g1v0270900_LC LjG1.1_chr1 66086850 66087874 +
3 domain predictions
2 GO terms
LotjaGi1g1v0644500.1
n.a. Beta-glucosidase; TAIR: AT5G20950.3 Glycosyl hydrolase family protein; Swiss-Prot: sp|A7LXU3|BGH3B_BACO1 Beta-glucosidase BoGH3B; TrEMBL-Plants: tr|V7CXE8|V7CXE8_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0644500 LjG1.1_chr1 120173322 120179235 -
3 domain predictions
2 GO terms
LotjaGi1g1v0644500.2
n.a. Beta-glucosidase; TAIR: AT5G04885.2 Glycosyl hydrolase family protein; Swiss-Prot: sp|A7LXU3|BGH3B_BACO1 Beta-glucosidase BoGH3B; TrEMBL-Plants: tr|I1ML01|I1ML01_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0644500 LjG1.1_chr1 120173322 120179235 -
3 domain predictions
2 GO terms
LotjaGi1g1v0644500.3
n.a. Beta-glucosidase; TAIR: AT5G04885.2 Glycosyl hydrolase family protein; Swiss-Prot: sp|A7LXU3|BGH3B_BACO1 Beta-glucosidase BoGH3B; TrEMBL-Plants: tr|I1ML01|I1ML01_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0644500 LjG1.1_chr1 120174449 120178248 -
3 domain predictions
2 GO terms
LotjaGi1g1v0760700.1
n.a. Beta xylosidase; TAIR: AT1G02640.1 beta-xylosidase 2; Swiss-Prot: sp|Q94KD8|BXL2_ARATH Probable beta-D-xylosidase 2; TrEMBL-Plants: tr|G7KSS4|G7KSS4_MEDTR Alpha-L-arabinofuranosidase/beta-D-xylosidase; Found in the gene: LotjaGi1g1v0760700 LjG1.1_chr1 133377778 133384869 +
3 domain predictions
2 GO terms
LotjaGi1g1v0760700.2
n.a. Beta xylosidase; TAIR: AT1G02640.1 beta-xylosidase 2; Swiss-Prot: sp|Q94KD8|BXL2_ARATH Probable beta-D-xylosidase 2; TrEMBL-Plants: tr|G7KSS4|G7KSS4_MEDTR Alpha-L-arabinofuranosidase/beta-D-xylosidase; Found in the gene: LotjaGi1g1v0760700 LjG1.1_chr1 133377899 133384681 +
3 domain predictions
2 GO terms
LotjaGi1g1v0760700.3
n.a. Beta xylosidase; TAIR: AT1G02640.1 beta-xylosidase 2; Swiss-Prot: sp|Q94KD8|BXL2_ARATH Probable beta-D-xylosidase 2; TrEMBL-Plants: tr|G7KSS4|G7KSS4_MEDTR Alpha-L-arabinofuranosidase/beta-D-xylosidase; Found in the gene: LotjaGi1g1v0760700 LjG1.1_chr1 133378039 133384244 +
3 domain predictions
2 GO terms
LotjaGi1g1v0760700.4
n.a. Beta xylosidase; TAIR: AT1G02640.1 beta-xylosidase 2; Swiss-Prot: sp|Q94KD8|BXL2_ARATH Probable beta-D-xylosidase 2; TrEMBL-Plants: tr|G7KSS4|G7KSS4_MEDTR Alpha-L-arabinofuranosidase/beta-D-xylosidase; Found in the gene: LotjaGi1g1v0760700 LjG1.1_chr1 133380516 133384244 +
3 domain predictions
2 GO terms
LotjaGi2g1v0098600.1
n.a. Beta-glucosidase; TAIR: AT5G04885.2 Glycosyl hydrolase family protein; Swiss-Prot: sp|A7LXU3|BGH3B_BACO1 Beta-glucosidase BoGH3B; TrEMBL-Plants: tr|A0A151UE06|A0A151UE06_CAJCA Lysosomal beta glucosidase; Found in the gene: LotjaGi2g1v0098600 LjG1.1_chr2 32264201 32269398 -
3 domain predictions
2 GO terms
LotjaGi2g1v0098600.2
n.a. Beta-glucosidase; TAIR: AT5G04885.2 Glycosyl hydrolase family protein; Swiss-Prot: sp|A7LXU3|BGH3B_BACO1 Beta-glucosidase BoGH3B; TrEMBL-Plants: tr|A0A151UE06|A0A151UE06_CAJCA Lysosomal beta glucosidase; Found in the gene: LotjaGi2g1v0098600 LjG1.1_chr2 32264435 32268923 -
3 domain predictions
2 GO terms
LotjaGi2g1v0098600.3
n.a. Beta-glucosidase; TAIR: AT5G04885.1 Glycosyl hydrolase family protein; Swiss-Prot: sp|A7LXU3|BGH3B_BACO1 Beta-glucosidase BoGH3B; TrEMBL-Plants: tr|A0A0B0N5P6|A0A0B0N5P6_GOSAR GluA; Found in the gene: LotjaGi2g1v0098600 LjG1.1_chr2 32264448 32268923 -
3 domain predictions
2 GO terms
LotjaGi2g1v0098600.4
n.a. Beta-glucosidase; TAIR: AT5G04885.2 Glycosyl hydrolase family protein; Swiss-Prot: sp|A7LXU3|BGH3B_BACO1 Beta-glucosidase BoGH3B; TrEMBL-Plants: tr|A0A1J7H173|A0A1J7H173_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0098600 LjG1.1_chr2 32264448 32268923 -
3 domain predictions
2 GO terms
LotjaGi2g1v0098600.5
n.a. Beta-glucosidase-like protein; TAIR: AT5G20940.1 Glycosyl hydrolase family protein; Swiss-Prot: sp|A7LXU3|BGH3B_BACO1 Beta-glucosidase BoGH3B; TrEMBL-Plants: tr|A0A072UIE5|A0A072UIE5_MEDTR Beta-D-glucoside glucohydrolase; Found in the gene: LotjaGi2g1v0098600 LjG1.1_chr2 32264448 32268923 -
3 domain predictions
2 GO terms
LotjaGi2g1v0098600.6
n.a. Beta-glucosidase; TAIR: AT5G04885.1 Glycosyl hydrolase family protein; Swiss-Prot: sp|A7LXU3|BGH3B_BACO1 Beta-glucosidase BoGH3B; TrEMBL-Plants: tr|A0A151UE06|A0A151UE06_CAJCA Lysosomal beta glucosidase; Found in the gene: LotjaGi2g1v0098600 LjG1.1_chr2 32264448 32268923 -
3 domain predictions
2 GO terms
LotjaGi2g1v0098600.7
n.a. Beta-glucosidase; TAIR: AT5G04885.1 Glycosyl hydrolase family protein; Swiss-Prot: sp|A7LXU3|BGH3B_BACO1 Beta-glucosidase BoGH3B; TrEMBL-Plants: tr|A0A151UE06|A0A151UE06_CAJCA Lysosomal beta glucosidase; Found in the gene: LotjaGi2g1v0098600 LjG1.1_chr2 32264448 32268923 -
3 domain predictions
2 GO terms
LotjaGi2g1v0331000.1
n.a. Beta xylosidase; TAIR: AT5G10560.1 Glycosyl hydrolase family protein; Swiss-Prot: sp|Q9LXA8|BXL6_ARATH Probable beta-D-xylosidase 6; TrEMBL-Plants: tr|G7KF67|G7KF67_MEDTR Glycoside hydrolase family 3 protein; Found in the gene: LotjaGi2g1v0331000 LjG1.1_chr2 80664299 80667710 -
3 domain predictions
2 GO terms
LotjaGi4g1v0033200.1
n.a. Beta xylosidase; TAIR: AT5G64570.1 beta-D-xylosidase 4; Swiss-Prot: sp|A5JTQ3|XYL2_MEDSV Beta-xylosidase/alpha-L-arabinofuranosidase 2; TrEMBL-Plants: tr|A0A072UQA9|A0A072UQA9_MEDTR Beta-xylosidase/alpha-L-arabinofuranosidase-like protein; Found in the gene: LotjaGi4g1v0033200 LjG1.1_chr4 4043168 4050216 -
3 domain predictions
2 GO terms
LotjaGi4g1v0033200.2
n.a. Beta xylosidase; TAIR: AT5G64570.1 beta-D-xylosidase 4; Swiss-Prot: sp|A5JTQ3|XYL2_MEDSV Beta-xylosidase/alpha-L-arabinofuranosidase 2; TrEMBL-Plants: tr|A0A0R0IPH2|A0A0R0IPH2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0033200 LjG1.1_chr4 4043848 4049029 -
3 domain predictions
2 GO terms
LotjaGi5g1v0246000.1
n.a. Beta xylosidase; TAIR: AT1G02640.1 beta-xylosidase 2; Swiss-Prot: sp|Q94KD8|BXL2_ARATH Probable beta-D-xylosidase 2; TrEMBL-Plants: tr|I1JBG9|I1JBG9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0246000 LjG1.1_chr5 55417280 55421361 +
3 domain predictions
2 GO terms
LotjaGi5g1v0246000.2
n.a. Beta xylosidase; TAIR: AT1G02640.1 beta-xylosidase 2; Swiss-Prot: sp|P83344|XYNB_PRUPE Putative beta-D-xylosidase; TrEMBL-Plants: tr|A0A0R0HT51|A0A0R0HT51_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0246000 LjG1.1_chr5 55417478 55421386 +
3 domain predictions
2 GO terms
LotjaGi5g1v0322400.1
n.a. Beta xylosidase; TAIR: AT3G19620.1 Glycosyl hydrolase family protein; Swiss-Prot: sp|Q9LJN4|BXL5_ARATH Probable beta-D-xylosidase 5; TrEMBL-Plants: tr|K7N397|K7N397_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0322400 LjG1.1_chr5 64092631 64096564 -
3 domain predictions
2 GO terms
LotjaGi6g1v0132600.1
n.a. Beta-glucosidase; TAIR: AT3G47000.1 Glycosyl hydrolase family protein; Swiss-Prot: sp|A7LXU3|BGH3B_BACO1 Beta-glucosidase BoGH3B; TrEMBL-Plants: tr|A0A072UWG8|A0A072UWG8_MEDTR Glycoside hydrolase family 3 protein; Found in the gene: LotjaGi6g1v0132600 LjG1.1_chr6 38183664 38188791 -
3 domain predictions
2 GO terms
LotjaGi6g1v0193100.1
n.a. Beta-glucosidase; TAIR: AT5G20950.3 Glycosyl hydrolase family protein; Swiss-Prot: sp|A7LXU3|BGH3B_BACO1 Beta-glucosidase BoGH3B; TrEMBL-Plants: tr|G7J6L9|G7J6L9_MEDTR Glycoside hydrolase family 3 protein; Found in the gene: LotjaGi6g1v0193100 LjG1.1_chr6 48921596 48927302 -
3 domain predictions
2 GO terms
LotjaGi6g1v0193100.2
n.a. Beta-glucosidase; TAIR: AT5G20950.3 Glycosyl hydrolase family protein; Swiss-Prot: sp|A7LXU3|BGH3B_BACO1 Beta-glucosidase BoGH3B; TrEMBL-Plants: tr|G7J6L9|G7J6L9_MEDTR Glycoside hydrolase family 3 protein; Found in the gene: LotjaGi6g1v0193100 LjG1.1_chr6 48922406 48927325 -
3 domain predictions
2 GO terms
LotjaGi6g1v0193100.3
n.a. Beta-glucosidase; TAIR: AT5G20950.3 Glycosyl hydrolase family protein; Swiss-Prot: sp|A7LXU3|BGH3B_BACO1 Beta-glucosidase BoGH3B; TrEMBL-Plants: tr|G7J6L9|G7J6L9_MEDTR Glycoside hydrolase family 3 protein; Found in the gene: LotjaGi6g1v0193100 LjG1.1_chr6 48922756 48926836 -
3 domain predictions
2 GO terms
LotjaGi6g1v0193100.4
n.a. Beta-glucosidase; TAIR: AT5G20950.3 Glycosyl hydrolase family protein; Swiss-Prot: sp|A7LXU3|BGH3B_BACO1 Beta-glucosidase BoGH3B; TrEMBL-Plants: tr|G7J6L9|G7J6L9_MEDTR Glycoside hydrolase family 3 protein; Found in the gene: LotjaGi6g1v0193100 LjG1.1_chr6 48922756 48926891 -
3 domain predictions
2 GO terms
LotjaGi6g1v0256100.1
n.a. Beta xylosidase; TAIR: AT5G49360.1 beta-xylosidase 1; Swiss-Prot: sp|Q9FGY1|BXL1_ARATH Beta-D-xylosidase 1; TrEMBL-Plants: tr|A0A1J7FUN8|A0A1J7FUN8_LUPAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0256100 LjG1.1_chr6 56891281 56898246 -
3 domain predictions
2 GO terms
LotjaGi6g1v0256100.2
n.a. Beta xylosidase; TAIR: AT5G49360.1 beta-xylosidase 1; Swiss-Prot: sp|Q9FGY1|BXL1_ARATH Beta-D-xylosidase 1; TrEMBL-Plants: tr|A0A1J7FUN8|A0A1J7FUN8_LUPAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0256100 LjG1.1_chr6 56891640 56898048 -
3 domain predictions
2 GO terms
LotjaGi6g1v0256100.3
n.a. Beta xylosidase; TAIR: AT5G49360.1 beta-xylosidase 1; Swiss-Prot: sp|Q9FGY1|BXL1_ARATH Beta-D-xylosidase 1; TrEMBL-Plants: tr|A0A1J7FUN8|A0A1J7FUN8_LUPAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0256100 LjG1.1_chr6 56892082 56898020 -
3 domain predictions
2 GO terms
LotjaGi6g1v0271900.1
n.a. Beta-glucosidase; TAIR: AT5G04885.2 Glycosyl hydrolase family protein; Swiss-Prot: sp|A7LXU3|BGH3B_BACO1 Beta-glucosidase BoGH3B; TrEMBL-Plants: tr|A0A0S3S4G2|A0A0S3S4G2_PHAAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0271900 LjG1.1_chr6 58660981 58668638 +
3 domain predictions
2 GO terms
LotjaGi6g1v0271900.2
n.a. Beta-glucosidase; TAIR: AT5G04885.1 Glycosyl hydrolase family protein; Swiss-Prot: sp|A7LXU3|BGH3B_BACO1 Beta-glucosidase BoGH3B; TrEMBL-Plants: tr|A0A0S3S4G2|A0A0S3S4G2_PHAAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0271900 LjG1.1_chr6 58661016 58667175 +
3 domain predictions
2 GO terms
LotjaGi6g1v0354900.1
n.a. Beta xylosidase; TAIR: AT5G64570.1 beta-D-xylosidase 4; Swiss-Prot: sp|A5JTQ2|XYL1_MEDSV Beta-xylosidase/alpha-L-arabinofuranosidase 1; TrEMBL-Plants: tr|A0A151T7T5|A0A151T7T5_CAJCA Beta-D-xylosidase 4; Found in the gene: LotjaGi6g1v0354900 LjG1.1_chr6 66674548 66682182 +
3 domain predictions
2 GO terms
LotjaGi6g1v0354900.2
n.a. Beta xylosidase; TAIR: AT5G09730.1 beta-xylosidase 3; Swiss-Prot: sp|Q9LXD6|BXL3_ARATH Beta-D-xylosidase 3; TrEMBL-Plants: tr|I1KR53|I1KR53_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0354900 LjG1.1_chr6 66675314 66679613 +
3 domain predictions
2 GO terms
LotjaGi6g1v0354900.3
n.a. Beta xylosidase; TAIR: AT5G64570.1 beta-D-xylosidase 4; Swiss-Prot: sp|A5JTQ2|XYL1_MEDSV Beta-xylosidase/alpha-L-arabinofuranosidase 1; TrEMBL-Plants: tr|A0A151T7T5|A0A151T7T5_CAJCA Beta-D-xylosidase 4; Found in the gene: LotjaGi6g1v0354900 LjG1.1_chr6 66675339 66679613 +
3 domain predictions
2 GO terms