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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0655100 |
| Transcript ID | LotjaGi1g1v0655100.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | S-acyltransferase; TAIR: AT5G05070.1 DHHC-type zinc finger family protein; Swiss-Prot: sp|Q5PNZ1|ZDH21_ARATH Probable protein S-acyltransferase 3; TrEMBL-Plants: tr|K7MY14|K7MY14_SOYBN S-acyltransferase; Found in the gene: LotjaGi1g1v0655100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:121461789..121464763) extracted from Lotus japonicus Gifu genome v1.2.
ATAAAGGGTCCTTTTCATGTCAGAAATTTCTATTTGGTGGAAGAGTAGTCTTCGGCCACGATGCATCATCTCTTTTCTTA ACATCGTTCCTGATTGGAGGTCCAGCAATAACATTCTGCATAAGAATGCTGTTAACAATAAAAGAGGAAGACCCTCACTA TAGCCACCACCTTGTACTTATTGGAGGAGTGATTCTCACAATTTTGGTTGGTAAAGTTTTTAGTTTCCTTATCTACAATG AGTACTTGGCCTATTCATAATACTTACATGAGAGTTCACTTCTTGGTGCAGGATTTTACTTTTCTCTTTATGACATCTGG TAGAGATCCAGGAATTATCCCCAGGAATTCACATCCACCTGAATCAGATGAATCAGTTGACACAAATACACCATCTATGG AGTGGGTAAACAATAAAACTCCTAATCTGAAACTACCTAGAGTGAAGGATATGATAGTCAATGGCCATACAGTGAAGGTG AAATTCTGTGATACTTGCTTGCTATATCGTCCACCTCGTGCTTCCCATTGCTCTATCTGCAATAACTGTGTGCAGAAGTT TGATCATCATTGCCCTTGGGTTGGTCAGTGTATTGGATCAGTAAGTTTCCCTAACCACATTCAATTTATCAAGAAAACTT TTTGTACATAGTAGGTCGCGAGTTCAAGTTCTGGAAACAGTCTATTGAGTAAAAAGTAAGACTGCGTACAATAGACCAAG TGGAAGAATCCTTCCGACCCTGTGCATTGCTGGAACTTTCATGCACCGGCTGCCCTTTTTAAACCTCTAAAAACTCATTG GTTCATGATAATGCAAAAATTCTTATCTGTTCAAATTACACTGATTTTTGGAATAAGAAGTAGCTTTTGGTATGGACAGA TTTCTGACTATGTTTTTTCATTTATTTCTGTTTCTTTCCTCTTTGTTTTCTGAGTCTACCTATCTTGTTATCTTCCCCCC ACTTTTCTTCAGGAAAATCTAACATTGTTCCTCTTCTGTATGTTTTTCAGCGTAATTATCCATTCTTCATAATGTTCATA TCAACATCAACGTTGTTGTGTATATATGTGTTCGCATTTTCTTGGGTTAACCTTCTTCGAAATAGCGGTAGCTTGTGGTC AACCATGTCACACGATGTCCTCTCGGTTACTCTCATTGTATATTGCTTCATAGCCGTTTGGTTTGTTGGTGGGCTAACAG TATTCCATCTTTATTTGATCTCCACCAACCAGGTTCTCTCTCTCTCTCTCTACTATGTTGTTTGTTATTTGCTTCAGTAA GCTATGATTGGCAATTCATAATTGAAATTTTTGTGGTTTTAATGTGAGATTTTTAGTAATCTTTGTTTGGTAAGTCTAGA ATTGGTCATTAGTTATAAACAGTAATTTGGTAGCCTAAGTAGACGTGAAACCCTTATAATTGATTCTGAAGGCAGAATCA ATTCTTAGGAGAAGATTCATTGAGCAGCTTCTGGGTTTCAAAATTGACTCGGAGGAAAGAGAAGCTCATCCGATGTTATA CATTTTGGGCACTGTTCTGTTTTTTTCCTAACACTGTTGCTTTTATATCCTATATGGCGGGAGAGAGCTTTCTTTGTTAA CTAAAAATGGAGACTAGTCCTTGAATAGGTTTTTGCTATTTCCTTGGGAAGAGCTCTGAGGATATAAAAGATGAAGCTAG ATATAAACCTTTTATATGAAAATTTCTCAATGTATTTACTTGCTAAGTTTAGTGTCCATTTTTAGTCTAAATGTACATGT CCCTTTGAATTGACCCCTGTGTGAGTGTCCTTATGTTCAATGTACCATATGATGCATCAGTGTTAGACTCACCCTTTTTG GCATTTCCTTTTCTTATAGACAACTTATGAGAATTTCCGCTACCGCTATGATAAGAAGGAAAACCCATATACAAGGGGAA TTGTGACAAACTTTAAAGAACTTTCCTGTTCCAAGATTCCAAGATCATTGGTCAATTTCAGAGCATGGGTTAGAGAAGAG GATGATGTTCAAGATGAATCCTTTACTTCAGATCTCGAAAAGGGTTTCATAAGCTCAAAACAGAAATTCGACATGGAAAT GGGAACTGTGTATGGCAAGGATGGCATGCGAGTTCCTAATATTTTACAGGATTTGGATTATAACGGCATTGATGATCATT CGAAGAAGAAAGCAGGAGCAAAAGAAACTGCATTTGATATTTTTGTTCCTGCTGATCAAGATGTAAAATATGCCCAATGG AAATCCAAACCTGGAGTCAATGCTCATGACGAGAAGCAATAGCTCCTTCAGATTGCATTGCTGGTTCTTTAGAGTAAAAG GTACCATTTTGGTGTTTGCTTGTCTCTATGTACATACAGAAATTCTTATGCAAAATGTACTAAATAATCAATGATCAAGA ACTTGTAAAATCATTTACAAATATCTATGTGTTGCTTTGATTTGTGAAATACATGAAATAGAATCAAATGAGGGGTTTGT AGGAAGCTTGAGGACTTTTAAGGTTCAGAAAGTAATGCTGCAACGTGTCCACTGTTTTTGGTGCAGATCCATTTGGGCAT ATCCTGAAAGGGAATATTTATAGGCAGTGGATTTTAGAGGTTGGAATGCTGTTTCACCAATGAACGGGGTGGCGTGAATG GGGTTGAGTTGTGACTTCTTTTTTTTTGAATGGAAGTTGTAAAAGGAAACAAATGAAATTTGTCAATGGTAACTCATGTT CTTCTCAGTTCTCAGTACTCAATGGAGAAAAGATTGACAAAGTTGCAAAAAAATTGTCACACGTTCACATATCAGTACTG CAAGACATACAAATGAATGAAGGAGCTAAATTAATGTATGTTGGACAATGCCTTTTCTTTCTTTTTTTCCTTAGCTTTAG TGTAAAATGCGTTATATTTGCATGCTTGCTACTTCTCCATTGTGACAAACGTTTTATTCAAAGAAATCAAGGTTTCAGGT ACCCCACATGGGGAC
CDS sequence (LotjaGi1g1v0655100.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCTGTTAACAATAAAAGAGGAAGACCCTCACTATAGCCACCACCTTGTACTTATTGGAGGAGTGATTCTCACAATTTT GGATTTTACTTTTCTCTTTATGACATCTGGTAGAGATCCAGGAATTATCCCCAGGAATTCACATCCACCTGAATCAGATG AATCAGTTGACACAAATACACCATCTATGGAGTGGGTAAACAATAAAACTCCTAATCTGAAACTACCTAGAGTGAAGGAT ATGATAGTCAATGGCCATACAGTGAAGGTGAAATTCTGTGATACTTGCTTGCTATATCGTCCACCTCGTGCTTCCCATTG CTCTATCTGCAATAACTGTGTGCAGAAGTTTGATCATCATTGCCCTTGGGTTGGTCAGTGTATTGGATCACGTAATTATC CATTCTTCATAATGTTCATATCAACATCAACGTTGTTGTGTATATATGTGTTCGCATTTTCTTGGGTTAACCTTCTTCGA AATAGCGGTAGCTTGTGGTCAACCATGTCACACGATGTCCTCTCGGTTACTCTCATTGTATATTGCTTCATAGCCGTTTG GTTTGTTGGTGGGCTAACAGTATTCCATCTTTATTTGATCTCCACCAACCAGACAACTTATGAGAATTTCCGCTACCGCT ATGATAAGAAGGAAAACCCATATACAAGGGGAATTGTGACAAACTTTAAAGAACTTTCCTGTTCCAAGATTCCAAGATCA TTGGTCAATTTCAGAGCATGGGTTAGAGAAGAGGATGATGTTCAAGATGAATCCTTTACTTCAGATCTCGAAAAGGGTTT CATAAGCTCAAAACAGAAATTCGACATGGAAATGGGAACTGTGTATGGCAAGGATGGCATGCGAGTTCCTAATATTTTAC AGGATTTGGATTATAACGGCATTGATGATCATTCGAAGAAGAAAGCAGGAGCAAAAGAAACTGCATTTGATATTTTTGTT CCTGCTGATCAAGATGTAAAATATGCCCAATGGAAATCCAAACCTGGAGTCAATGCTCATGACGAGAAGCAATAG
Protein sequence (LotjaGi1g1v0655100.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLLTIKEEDPHYSHHLVLIGGVILTILDFTFLFMTSGRDPGIIPRNSHPPESDESVDTNTPSMEWVNNKTPNLKLPRVKD MIVNGHTVKVKFCDTCLLYRPPRASHCSICNNCVQKFDHHCPWVGQCIGSRNYPFFIMFISTSTLLCIYVFAFSWVNLLR NSGSLWSTMSHDVLSVTLIVYCFIAVWFVGGLTVFHLYLISTNQTTYENFRYRYDKKENPYTRGIVTNFKELSCSKIPRS LVNFRAWVREEDDVQDESFTSDLEKGFISSKQKFDMEMGTVYGKDGMRVPNILQDLDYNGIDDHSKKKAGAKETAFDIFV PADQDVKYAQWKSKPGVNAHDEKQ
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 288 | 288 | 9.5E-143 | – | |
| PANTHER | 1 | 288 | 288 | 9.5E-143 | – | |
| Phobius | 1 | 11 | 11 | - | – | |
| Phobius | 12 | 35 | 24 | - | – | |
| TMHMM | 15 | 37 | 23 | - | – | |
| Phobius | 36 | 134 | 99 | - | – | |
| MobiDBLite | 43 | 63 | 21 | - | – | |
| Pfam | 90 | 211 | 122 | 2.4E-36 | ||
| ProSiteProfiles | 91 | 141 | 51 | 27.168 | – | |
| Phobius | 135 | 158 | 24 | - | – | |
| TMHMM | 135 | 157 | 23 | - | – | |
| Phobius | 159 | 177 | 19 | - | – | |
| TMHMM | 177 | 199 | 23 | - | – | |
| Phobius | 178 | 200 | 23 | - | – | |
| Phobius | 201 | 344 | 144 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Palmitoyltransferase activity | Catalysis of the transfer of a palmitoyl (CH3-[CH2]14-CO-) group to an acceptor molecule. |
Expression pattern of LotjaGi1g1v0655100.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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