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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0656200 |
| Transcript ID | LotjaGi1g1v0656200.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | WD-repeat protein, putative; TAIR: AT3G56900.1 Transducin/WD40 repeat-like superfamily protein; Swiss-Prot: sp|Q8GWR1|AAAS_ARATH Aladin; TrEMBL-Plants: tr|A0A0R0EL31|A0A0R0EL31_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0656200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:121589727..121595805) extracted from Lotus japonicus Gifu genome v1.2.
GGAAGAAGAAGAGAAAGCGGGAAAAGAAGGAGAAAAACAAAACAAAGCAAAGCAAGCATTTGACTGCTAAAACCCTATTC TCATGGCTTCCTTCCCTCCTCTCGGTTCACTCACTCTCTGCGAACTCAATCGCGACCTAAGTACCTCTCTCTCTCTTTCT CTCTAACTCTCTCTCCCTCTCTCTCTTCATTCTTTAACTGAATCTCTCTCCCCAATTTTCTGCAGTCACCGTCGACGCTC TCTCCGACGATCGAGCCAACAGCGCTTACGGAAAACTTCTCGTAACCACTCGCACTCTCCCCAATCGATCCAATTCAATT CAATTCTTTCTCATTCACTCACTAGTAATTTCTCTTATTATTAGGGATTGGTCTTCAGCCCCGTGCCATTTCACCCTCTC GACACCACCGACGATGCTCCCGAACAGGAAGATGGAACTACTGCAACCGCAACCGCAACCGCCGCGGAAATCGTTCCGAG GAAAGGCCCCGCGGCGATCTTGCAAGGATTCGTCAATGACTGCCTCAGGCGCCTCTTTTACCCTAACGATGTATGATCTC TCAGTCCTTGTAGCGGTGGCGGCGTCACGTGTTGTTGTAATTTGGATTGTGAGCGTTATTCTTCTGTCTGTGTGCAGGTG CATTTGTTGCCGGAGGTTAATCTTCAAGGAGTAAGCTGGCACCTGAATAAGCATATAATTGCTTTTATATCTGGGCCAAA TCAAGTTCTCGTCCGTGATTATGAGGATTCGGGTACTTGACTCCTTTTATGAGCACAATGCATGTGATTCTAACAGTTTT TAGTTATTGTTGTTAGTTAGTTTTGAATTGATAGTTGGTTAGTTACTTGACATTCACCTTTGTTGTTAGTTAGTTAGTTC ACTTGCAGCATTCTTGGTATATATAAGCAATTTTGTTTTGTTTTGATTAATCAGTTCAATGATGCAAAACTGCTTATATA CAAAAGTGCTGCAAGTGAGTTAACTAACTAACTAACAGGATAATTGTCAGTAACTAACCAACTTACACGGCTGATTAACT AACCATAACTTAGAGTACCATGAATATTGTTGCTCGTGTTGTGTTGTGATGGATACAAAGGTGTATATTTTTTATAGAGG TTTGCATTTAATAACAGCTGATATGACTTTGGTACTGTGAATAGAGGGGAAGGATCCAGTTGTTTTGACCAGCGAGTCTC AGCGAGATGTTAGGGTGCTAGAGTGGAGGCCCAATGGCGGGAGGATGCTTGCCGTGGGTTGCAAGTGAGGTTCTGCCTTT GTGTGTGTTTGTTGTGGGTTTGTAAAGTATCAATTGCTAGGGTGTTTCTCTTTCGTGTTTACTAGATTTGGATTTACTGC TGCAGGAGTGGAATTTGCATATGGGCTGCTTCTTATCCTGGGAATGCGGCATCTGTTAGATCTGGTGCTACTTCCTTCCT GGGAGGTTTATCTAGAGGGTCAGGAATTCGGTACATCCTGGTTGATTTTCTTCGGAGTCAAAATGATGAGCATGTTAGCG CACTTACATGGAGTCCAGATGGAAGATATCCTCATATATGTCAAAAAGTCTTTTTCAATTTTAGCACATGTTTCCCAAAT ATGAATATCACTGTTCTCAATCTTTCTTCTTGCAAGATATGCTACTGTGGTTGTAATTTTTTTTTGAATGCATACATAAA AGACTAGCCATAGTTGTCAAACTTGTGAGTTTAATTCATTAACTAATGTGAACTTAGTAGGAACCTTAGTTGTTTATTTA TGGACACTTTCAAAGTAGATATCTTGTTTTTGAATTTAAGTTACTTAATCATTTTTTTCTTAACCTGTTTTCACATACTT AGCCACTGCTTCATATGAGAGCTCCTCGTTCACTGTGTGGGATGTTGCTCAAGGTACGATGAAAGATCTTTGACTCTTTA AGTTGTTGGCATTTTAGCTTGAACCATCCTTTCTGCTTGGTGAGGATACTAATATACCGAATAAGCTCAAAACTCATTCT GGGTTTTTGTTTTTTGTTTTCTACCTGAATTGTAAATTGATAGTTTTAAGGGGATATTAAATGTATCCTAAACTGTGTAT GTTTACAACGTGGACTCATGACCTAAACAATACATTAGTATGCTAAAGGAGCCTGTTGGACCATAAACAAACCCTGCTTC AACAATCAGGTTGCAGAAATGTATCCCTTAACACCTAAATTCGATTTACTCGCGTGACAAGTGAACTAGTATCTACCAGA GCTACTTTCCTTTATAGTTTATACCTTATACCCAAGCTTATTTTACTCAAGTTTGGAATCCAGCAGAGCAAAAGTTTAAA TGTTTCATGTGTACGTTTGTCTCTGAATTCTGAACATCTGGTTATTTTTTCATATTATCTGTAGGTGTGGGGACTCCCAT CCGACGGGGATTGGGAGGCATATCAATGCTAAAGTGGTCACCTACTGGAGATTACTTCTTTGCTTCAAAATTGTAATGCA TCTTGCTAAAGTTGACTTTTGTAAATATTGAAAAAGAGCTGCTTATGATTCATCCTCGTTATTATGTTATCTTACAGCGA TGGAACATTTTATCTTTGGGAGACGAACACATGGACATCAGAACAATGGTCATCATCTAGTGGTTTTGTTAAGGTATATA AGTTTTACATTCATGTTTTGGTGCTCTAAGATATGACCTATTCACATTTTATCGTAAGATAATGTGCTATTAACCTTTGC ATGTGTTTAGGATTTATTTGAGGTAAAAACATGAAAACAAAACTTATTTCAAGATGAGACTGGGAAATAATTAATATGCA TGTATCTTGAGAGCGCAATGCAATCACAGATGATCTTAATTTTTCAGTAGAAAATTAGTGTCTTAATCTGAAGCAGTTGA TCAAGTGTTCTAAGTTATCTCTTCTGATAGCTGTCCCATAATGGTCTTAGTACATAACTGATTTCTACTTTCAATGATAT GTAATCAGTGTGCAACATGGGATCCAGATGGGGGAATGATACTGCTTGCATTTTCTGAATCATCAACTTTGGGATCTGTT CATTTTGCATCGAAGCCTCCCTCATTAGGTATTGGACCATTTTATTTCAAAGATCTTTTCTTGATTTTTGTTTATTGTTT GTGTATCTGCTATATTAATTCTGGAATATGGTATCAAAATGTAAGAACAAAATGGAAAAAGAAAAGAGAGGGGTCAATAT AGGGTATATTTTATTAAAAAAAGTCTGGATAACAGTGACATAAAACACTAACCTAACACAATCAATTTATAATAAAGAAT GACTGAAAAGGCTGGCATTGAGGACGATCAATGATGGTACTGCTCTTTTAGTTTTACAAATAATGAAACTCTTATGATTT GGATAGAAAGGGACATGTGGAATAGAGATGTAGAGATGGAACAGTGTAAATTATATTTCTCTAATAAAGTAAGTGGTTAT AATACAAAACACTGATCCTATCTCCATGCTAAAAGCTGTGACTGGAAAAACATCTATGCACTCTACTTTGGGTGTATTAC GAGTAATGCATACTTACCTAAAAAATTTAGCTAAACCCATGCATATTTCTCAACAGATACTGTTTTTTAATTTAATTGTA GTTGATAGTTGGTATTTGAGATGAATAGTTATGATTAAAATGTTTAATTTTTTTTTCTAAAAATAATAGTAACTCATTGT TGACTTTTCCAGATGCACATCTGTTACCTGTTGAATTGCCTGAGATACTATCGTTGACAGGCAGGTAAAAATGAATTTAT GACTGTGTTCAATATATCTTGAATTGTTTTGGTCCTAAAATCATGTCATCATGTCAAATTCCTCCTGAACCAATTCTTAG GACTGGAAGAAAAGACTGTAGTAACTAATTGTTGCATTTTTCATCACCAGCTGTTTTAATTCTTTCTCCTCCTGGTCTAT CATATGTATAAAAATTTCTGATTTATATATTTTGAATTAAGTGGGGGTTTCTGCATTCTTGGCTTTGGATTTTGTACAAT GTACATCATAGATTATAGAAATTGGAACTTTTTTTTGGGTTTCTCGGGCACAGTTAATTTAATAGGGTGTTTCATTAGTG TTTTCCTGTTTTCATTTTTACTAAAAGAATGAAAAAGGGTGGAAATTGTGTTTGGCTGTGTTTAATTATTTTTCTTTATC TTTTAAAATGTGGCCAAGTTTAAAAGTAACAAATAATTGTTTTATCAATTCTCAAAATTTCAGAAACAGGGTACAGGAAG TTTAAAATTTGATGGCAACTTTCTGATTGTATTAAAAGTATATATCAACAATACTTAATAAAAACTGAATTTCCTCTTAC TATTTGTGCTTATAATGAATTTTAGATTTCTTGTCTAATTAGTTGGCAAGTATTGCTCCAGTGAAATATATCAGCTTATA GCCCCCTGATATTGTGTTTCCAGCCCTCAATCCTAAAGAGGAATTCTTGGATGTTCTTCTGTGATGGGCTATATTTTTTA ACCATGCTCTGTAGCAATGGAATGTGGTTAAGAGAAGTTTTTTTCCGCTTCCAAAAACATGTTTGGTTTTATATTTAAAT CTTCCATAATCACTTCTCCTTCCACAAAAACTATTAAGAGTAGCTTCTCCTAGAATCACTCCTCTCCTAGAATCACTCCA AATACACACTTAATCTGGCTGGCCTCTGGAATTCATTTCTTTTTCACTTCATGGTTTTTTTCTTTCACTTCATGGTTTTT TCTTTTCCTCTCCCCCTCTCAACCTTGTTGAACACGCTGCTTAGGTGTCTTTTGCATGTGATTTTTGTCTAGGTTCTTCA TCTTCCTTTCCTAGTCTCATGGAATTATGTTATTTGCTAACTGCATTGTAGCTTGTAGCAAAAAACCCACCAGATATCGG TGTTATCTTATCAAATAATGGAATTTGTATCTGTATCTTATGGTTATCATGTTTGTTTTTGTTAGAAACTATGTACTTAT TGGTTATATTATTTATTCAGCCAGGGAATTGAAAAGATAGCATGGGATAATTCAGGGGAGCGATTAGCTGTATCTTTTAA AGGTGGAGATGAAATGTACAGGGGTCTGATCGCCGTATATGATACAAGAAGGACTCCTCTGATATCTACATCCTTAATGT GAGTTCATGGTTGAAAATGGTCCAGTTACTATAGGGCATTTTTGCTGTTGTGTTGTGTTTTTTTTATTATATAAATGTTG AATTTATTTGTTGTATATTTTCTATACTTTGCCAAATACTTTTGAAACTATTAATCATTTGCAGTGATTTATTTTTACAT GATATCTTTTAGTGGATTTATAAGAGGGCCTGGAGACAATCCAAAGCCAATCTCATTTTCGTTTCACGGGAAGCTTAAAC AGGGACCACTGCTTTCTGTGGTAAGTCAGTTGAATTTCAGTGCTTTCTTTATTTTCAAACAAGTTATAATGATAGAAAGA CTTGAGGTGCATCGGTGAATATTCTTGTGATATCATAGTTGTAATGTTGTTGGAGATCCCTGAATTATAAAAAGAAGAAA TGAACCTCTAATTAAACTATTAAGAATTAGATAATCCTGGATTTTGGTCATACGTGTATTAGATGCTTCATTTTGGTATC TGTTCTTACCTCAAACATTTGAAGCTTTTTTCGCATATATTTTTATTCTGCAGTGTTGGAGCAGTGGATTTTGTTGCACT TACCCCCTCTTATTTCGCTCTCATATGCTTTCATAGCGAGGAGTCGAGGACGTCTTTGAAATTTTGTTGTTTGTATACAA TTTGGAGATCTTATATCCAATACTTCGGGCTTACATTATTTTTTTCAGCGAAAGTGTTATTATCTTATGTTATGTGTATT TGAATATTGGCATGGCTGGTGATGTATTTGTTCAGCATGTCAGTTGACAATTCAGATGTATCAAGTAAACAGGGCACACA GTCTGTCAAAAAGGAAAAGAGCATGCATCTACAATGTAAAACTTCACATTTGTTGGGTCTGAAATGTAATTTACCATTTT TTTTGTAGTTTTAAAGTCCTCAAGTAATTTTGAATACCTTTCGTATTATTGATTTAAAACTTACCATATGATGAGAAAA
CDS sequence (LotjaGi1g1v0656200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTTCCTTCCCTCCTCTCGGTTCACTCACTCTCTGCGAACTCAATCGCGACCTAATCACCGTCGACGCTCTCTCCGA CGATCGAGCCAACAGCGCTTACGGAAAACTTCTCGGATTGGTCTTCAGCCCCGTGCCATTTCACCCTCTCGACACCACCG ACGATGCTCCCGAACAGGAAGATGGAACTACTGCAACCGCAACCGCAACCGCCGCGGAAATCGTTCCGAGGAAAGGCCCC GCGGCGATCTTGCAAGGATTCGTCAATGACTGCCTCAGGCGCCTCTTTTACCCTAACGATGTGCATTTGTTGCCGGAGGT TAATCTTCAAGGAGTAAGCTGGCACCTGAATAAGCATATAATTGCTTTTATATCTGGGCCAAATCAAGTTCTCGTCCGTG ATTATGAGGATTCGGAGGGGAAGGATCCAGTTGTTTTGACCAGCGAGTCTCAGCGAGATGTTAGGGTGCTAGAGTGGAGG CCCAATGGCGGGAGGATGCTTGCCGTGGGTTGCAAGAGTGGAATTTGCATATGGGCTGCTTCTTATCCTGGGAATGCGGC ATCTGTTAGATCTGGTGCTACTTCCTTCCTGGGAGGTTTATCTAGAGGGTCAGGAATTCGGTACATCCTGGTTGATTTTC TTCGGAGTCAAAATGATGAGCATGTTAGCGCACTTACATGGAGTCCAGATGGAAGATACTTAGCCACTGCTTCATATGAG AGCTCCTCGTTCACTGTGTGGGATGTTGCTCAAGGTGTGGGGACTCCCATCCGACGGGGATTGGGAGGCATATCAATGCT AAAGTGGTCACCTACTGGAGATTACTTCTTTGCTTCAAAATTCGATGGAACATTTTATCTTTGGGAGACGAACACATGGA CATCAGAACAATGGTCATCATCTAGTGGTTTTGTTAAGTGTGCAACATGGGATCCAGATGGGGGAATGATACTGCTTGCA TTTTCTGAATCATCAACTTTGGGATCTGTTCATTTTGCATCGAAGCCTCCCTCATTAGATGCACATCTGTTACCTGTTGA ATTGCCTGAGATACTATCGTTGACAGGCAGCCAGGGAATTGAAAAGATAGCATGGGATAATTCAGGGGAGCGATTAGCTG TATCTTTTAAAGGTGGAGATGAAATGTACAGGGGTCTGATCGCCGTATATGATACAAGAAGGACTCCTCTGATATCTACA TCCTTAATTGGATTTATAAGAGGGCCTGGAGACAATCCAAAGCCAATCTCATTTTCGTTTCACGGGAAGCTTAAACAGGG ACCACTGCTTTCTGTGTGTTGGAGCAGTGGATTTTGTTGCACTTACCCCCTCTTATTTCGCTCTCATATGCTTTCATAG
Protein sequence (LotjaGi1g1v0656200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MASFPPLGSLTLCELNRDLITVDALSDDRANSAYGKLLGLVFSPVPFHPLDTTDDAPEQEDGTTATATATAAEIVPRKGP AAILQGFVNDCLRRLFYPNDVHLLPEVNLQGVSWHLNKHIIAFISGPNQVLVRDYEDSEGKDPVVLTSESQRDVRVLEWR PNGGRMLAVGCKSGICIWAASYPGNAASVRSGATSFLGGLSRGSGIRYILVDFLRSQNDEHVSALTWSPDGRYLATASYE SSSFTVWDVAQGVGTPIRRGLGGISMLKWSPTGDYFFASKFDGTFYLWETNTWTSEQWSSSSGFVKCATWDPDGGMILLA FSESSTLGSVHFASKPPSLDAHLLPVELPEILSLTGSQGIEKIAWDNSGERLAVSFKGGDEMYRGLIAVYDTRRTPLIST SLIGFIRGPGDNPKPISFSFHGKLKQGPLLSVCWSSGFCCTYPLLFRSHMLS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 451 | 451 | 1.1E-146 | – | |
| Gene3D | 102 | 259 | 158 | 2.1E-13 | ||
| SUPERFAMILY | 108 | 440 | 333 | 7.14E-29 | ||
| SMART | 141 | 179 | 39 | 1.7 | ||
| SMART | 207 | 248 | 42 | 0.25 | ||
| Pfam | 220 | 248 | 29 | 0.043 | ||
| SMART | 250 | 289 | 40 | 7.1 | ||
| Gene3D | 262 | 442 | 181 | 1.1E-10 | ||
| SMART | 347 | 391 | 45 | 260.0 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi1g1v0656200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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