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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0671800 |
| Transcript ID | LotjaGi1g1v0671800.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | ABC transporter G family member; TAIR: AT3G21090.1 ABC-2 type transporter family protein; Swiss-Prot: sp|Q8RWI9|AB15G_ARATH ABC transporter G family member 15; TrEMBL-Plants: tr|A0A151TTX1|A0A151TTX1_CAJCA ABC transporter G family member 15; Found in the gene: LotjaGi1g1v0671800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:123581567..123587798) extracted from Lotus japonicus Gifu genome v1.2.
GGAGTGGGGGAGAGAGGTGCAGCAATGGATGCTATGGTGATGGCGTGGGAAGATTTAACAGTAGAGCTCCCAAACAAGAA GTTTCTGCTTCATGGGATTACTGGTTTTGCTCAACCTGGTAGGATCATGGCCGTCATGGGTCCTTCAGGTTGTGGCAAAA CCACCCTACTCGACTCATTGGCAGGTCTCTCTCTCTCTCTGACACTTAGTATTTTTTTACTTATTTATTTTAAACTACAT AAGCTCTCTTCATAGCATATCTTAGAGTGTTTTCTGTTGTATATAAAAAAATCACATCTTAGAGTATTACTAAGTAGGTT GGGATATCAGTTCAACACTTCGTCTCTTAAATCAATAATTGAACGTTTGAACCTCAACCGTTGTGAATCAAGAAAACTCA TAGTCCAACCCCTTTTACTGACTGCATGGCAAGAAATTAATCTCAAATATACCCATTGTACGTACCTTGATTAAGACAAA AAATCATACTTAGAGCATACGAGTTGAATCTATTCCTTTTACGTTTTCATTATGCTCCTCCTTAAATCTTTTGTGAACTT CTTTCTAAGAGTTAATAGTGAGTTTAAACGTGGTTGGATTAAATGATATTTTTTTTATAGAACCAGTATTTTTAAAGAAA CATAAAATAACATGTTCTTTTTAGCAAGTTTTTAAATGATACATGTTTTATATATTCTTTTTTTTTATAGGCAAATGTTA GTTGTTAGAAATGTTAGTAAATTAATCTCTCATCCGGGTTCGAACCCGAGACCCTTCACCCTCACCCCACCCAACCCTTA TATTCTTTTTAACTATGTTTTCAGACTCAGGCTAACGAATAGAGAAAATATATTATTAAGAGAGCTAATCGATCTTGCCA TAATATAAATATTTGTGGTTCTAATCATTCATGATGAGAAATGTTTTTGTGGACTGAAAATGTCATAAGATTTAACTCAT AAGTAATTATATTATTCTAGTTTTTATTCCAATGACATGCAGTTTCTTAACTTTTATTGTTGAATTCATGATATATAGCC CTACATTTTTATGGTTTTTTTTTTAATTTAATTTGGGTTGCATATTCATTCTGAGTTAAGAGAGAAAATGAATTACTTTA ATCATAAGATCTAATTGCTTGTAAAATCTCAAAAACTTATTTTTAAGCTCGTTGGAGTGCTAGCTAAACTTACTTCAATT AAAAAAAAAACTACTTGCTTAGTGAAAAGAAACTCAGCTACTAAGGTTTAGATATACTCTTAACATAATTGTCTCCCTTA ATGGAATATACACGTGATGCTTACAAAATTAAAAGGAAATTGAATTGAACGGTATCTAGTAAATAGTTTTGGAATATTGA TTCATTTACATTTTTATTTTCTCTTCCATCTCATTTTCTCTTTTTATATTTCTCTTCTATGCATATATGATCATTTATTA TACCTCTCATTGGACATGATCTCGTAGAACCATATTGATATTTAATGATACATTTCGTATCTTGCTAAAAAAATCTATTC TTGTTTACCAACCACACATTATCTAACCAAATTTAATTCTCTCTTGATATGTTCCTCAAAAAATCCGATTCGTGCGGCAG CTTCTTCCCCAACTAACAAAGCACTCATTGAATAAAATTATATATATATTTTAAGTATTTGAATGGTGTAAGATTAGTTA TGTTAAAAGGTTTCATCGACTTATAGCTATATGTGGTCCATTTGACAATAGACATACTTGATACATCTCTTGAACAGGGC CAGCCCTGGGCCTGTGCAAGCAGGCCCACAGCCCAGGGCATCCAAAAAGAAGGGGCAAAAAAAAATTATGATTAAACTTT CCCCTAAAATAAAATTTAGTTATAATAATTAATGTTCAAGGTGTTATTAATGATTTGAGCTGGTCTAGTGGTTAGTAACT GTGTATGTTGCTTGGATTCGAACACACGACCCCTGTGTGGGTTGCAAGAGGTCAGTTGTCAAACGAACCAACATAATGGT TCTGATGAAATTTCGAACGTTAAAATTATTAGGGGTCCATTTTTATAATTTGCCCAGGGCCTCCAAAATGTCGGGACCGG CCCTGCTCTTGAATGACGGCTGTTAGCTCCTCTTTCGTGTACAACTGGTGAAAATTATCTCTTTTAATTTGTATCTCTCA TTATGTCCGAGATTCATATTTAAACCAACCTTATACAAGTTCATGTAATTAATGAATGAGTAATCCATACTCTTTATAAG AGGTTATCTAATTTAATGGTCCCATGTGGTTATAACTCCATCCAGTAGTTTGTGTTGGTTTCAAATCTTGATTGAGACAA TAAGTATTCACATTTTGTACAGGAAAACATTCTGCAAATGTTATAGTGACCGGCAACATTCACATCAACGGAAAGAATAG AAGCCTGTATTACAGACAAGTGGTAAGATATATAATCTCATGCTGCAAAAGCCATAAAGCTATCCTTAAATGTGATCATA ACCGGTACATATAACCAATTATTCCAAAAGGTTGTCTAACACTCCTTACACAAGAGCTCATTTGGGTTTGAATTATGAAC ACAGATCGCTGACTGCTGAAATTTAATTTTTTTATTAAAAGAATTGATGGCGTTAAAGATCGAACTTTAAACCACTTAGT CACACAGATATTCCAATACCATGTCACTAACCAATTATACCAATTTTTTTTTTAAAAAAAATTATTCTAAAAGTTTAAGT TTTTGAGTAAAGTACACATGAATGGTTTTATTTCTAATACTAAGGAACAAATATAATTCTTGAATTTTCAGTGTTACGTT GCTCAAGAGGAAATTTTCTTGGGAACATTGACTGTAAGAGAGAGCCTCACATACTCTGCATACATGAGGCTTCCTTCTGA TATGACCAAAGAAGAGACAAACAAAGTAGTGGAAGAAACGATAATGGAAATGGGCCTAGAAGAATGTGCAGATACTAGGA TTGGGAATTGGCACTCAAGAGGTATAAGTAATGGTGAAAAGAAGAGACTCAGCATTGCCCTTGATTTTGACACAACCCCA TGTCTTGCTTCTGGATGAACCTACTAGTGGACTTGATAGTTCCTCAGCTTTCTATGTCATCCAAGCTCTAAGCAACATAG CTTGGAATGGAAAGATAGTTATTTGCTCCATTCACCAACCAAGTAGTGAAACTTTTGAACTTTTTGATGATTTGCTCTTG CTCTCAAGCGGGGAGACTGTTTATTTTGGAGAAGCAAAAATGGCTCTAAAGGTAAGCAGATTGACCCCACAAATTGGATC GGCTTATTTTTCCACAGAATCAATTCTGACATTCAAAAGCTACTCATTGATGGTGAAGTCAGAATCAATTCTGGAGAGAA GCTTCCCTTCCGCGAGTAGCTTTTGGATTCCGAATGGATTATGATGAAAGAGATGCTGATTCAAAGATCAAGCTTCTTCC TAAATTTGATTTTTACTTTAGCATCAATGCTAGAAGGATTTCCTATCATGCAATTAGTTACAAAATTTGAGCCACTAATG AATTTTGGGGTTAGTTTTTTGCTGATGCAGGATTCCCTTGTCCTACCAGAAGGAATCCTTCTGACCACTTCATTCTGTGC ATTAATTTGGATTTTGACTTGGTTGCTGAAACTCTAGCAAGATCTCATCATTTAAGTCTTGTAAGTTTGAGACATGTAGC CTTGTTCTATGTTACATTTGTTGACCAAGCTTCTAAATGTGAATTTCCTTATTGACAGTCAACATCATCCAACTCGGTAG TCGGCATGAAAACAACAGAGATTAGAGCAGCACTCATTGAGAGTTACAAAAGTTCAGACCTAATGGTCAATGCAAGAAGA AGAGCTCAACAACTGAAACAGCCCAATGTATGAATTCTTTAGTCAGTATTACTAGTCATGCAAAGCAAAATTTCTTAATG CAAATTCTACCTTCGTTTTATTATGAACCAACTGCCCCAAGTTACTTAGACAATTATACTATTAATAGCATGCTTGAGTA AACTTTTCTTCCATCAGAATCAATTCTAAAACCAAGAAGCTAAGTTTTTCCCCAGAATTGATCATAACTTTAGAATCAAT TGTAGAAGGGTTTCTAAACATGTACTCTTGCCGCTGTTTGATCTTTCTGGGGGTCATTGTTTTCACTTTTCAGGAAGATG AAGAACAAGTAATTGAGTCCAATCTAAGGAACACTACTAGCTGGTTCAGACAAGTATGCACATTGACACAGAGATCTTTC CTAAACATGACTAGGGACATTGGCTACTACTGGTTGAGGATCATATTCTACATAGCAGTGTCAATCTGCATAGGTACACT CTTTTTCCATATTGGAACAAACAGCAACTCAATCTTGGCTAGAGCAAAGTGTGTGTCTTTCATCTATGGGTTCATGATTT GTTTGTCATGTGGAGGATTGCCATTTTTCATTGAAGAATTGAAGGTAAATAATTGATCCTTTTCCTTAAGCAAAGGTAAT GAGATACTAAGATTTGAATCAAGATCTTCTGTCAAATTGTCTCATCTTCTGTCCCACCAAATAAATCCTGACATGTCAAA TAGAAACCATTCATGTAAGTTTATAACCACCAGACACAATTGACATGGCAGAATTTCATTAGTGACAGGATTGCCAAACC ACTCATTTGGGAACAGAAGATCTTGATCCCTAAAATTTATGTTGTGTTATGTTATCTACCTCTTAACAAATCCCAGAAAA AATCAGGTGTTCTATAGTGAAAGGTCCAAAGGGCATTATGGAGAGGCTGCATTTGTACTATCAAACATTATATCATCATT TCCTTTCCTTCTTCTAATATCACTCTCCTGTGGGATAATTATCTACTTCATGGTGCAATTTCATCCTGGTTTAAATAGCT GTGCATTTTTCTGCATCAACTTATTCTGCTGCCTATCTGTTGTTGAGAGCTGCATCATGGCTGTAGCCGCAGTGGTCCCC AATATGATGATGGGCATAGGAGTAGGAACTGGTGTTATAGTAAGTGAATCATTAATTTGTTTTCTACTCATATATGAATG AATATTTGTAAGAACTAGATGATTAATTTAATAGATGGTTTGGTGTAGATTTTCATGATGATGGCCTCCCAAATATTCAG ACCACTACCTGACATTCCAAAGTTCTTTTGGCGCTATCCCATGTCCTACCTCAGTTTTGCTACTTGGGCAGTGCAGGTAT GAAGTTCAGTGTTTTGGGAAAATTTTATTAAATCTAAAAATGGCCTAATAAAACAAAATCTCGGAAATGTAATATAAATT CATTTGTGTCATCATCCCATGACAAAGCTTGCACTATGACCACCACCAATAGCTTAAGTTTTAATTTTGTTTCCCAAGGT ATTCTCAGAGTCGGTAACTATGAGACTAATCCCTTTGAAACTTGGAGATCACATTAAGTGGGTAGGTCTCTCTTAACAAA TCATTTTCCATACACATCGCTCAGGGTCGAACCCTGGACTAAATGCTTAAGGAGCATAGCTATCTACCAACCATAACTTT GGTATACCTTATTGGTATTGCTCAAATTTTTAGGACATATATTGTACCTTGTCCTCTTCCCTGATAACGCTGATGTAAAA TAAATGTGATCTAATTACTAGTACTGACAACATAGATGAAGAATCTACCACTTCTGCTGGAAAATAAGCCCTTGCTTCTT TTTTCTATTCAACTGCAGGGACAATACAAGAATGACATGCTAGGGCTTGAATTTGATCCTCTGGTATCTGGGAACCCTAA AGTTTCAGGAGAGCAAGTCCTAACAACGGTGTTCGGGGTTCCACTGAATCATGGCAAATGGTGGGACTTAGCAGCACTGG TTACTCTACTATTATTTCACAGAATGCTTCTTTTCATAGTTCTTCATTTTCGTTGCTGCAAAAGAATGAAATAATCTATT CTTTGGAGCAATGATGTTCACTCGGTAACAAGCCACCCTTCTCTTCCAAGAAACAATATTCTCCAAAGTTCAAACTTTAC AATATAAATAGAAAGTAAATTTACAATATAAACTTGACCATGTTGAACACCATTAATATTGATTGGCTTTGTAATGAAGT TGCTTGAATTAAAATTATTTTGTTGATGCTCTAGCTAAACGAAGGTGAAATATGACTTGTGATTTGTGGTGTTTTTGGGA TAATAGTATAATACTGCTGTCTAATGTTTGGCGCAAGTCCCCTACTTGACAGGGTTGTTCTCAAGTTCCTTT
CDS sequence (LotjaGi1g1v0671800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTGAAAAGAAGAGACTCAGCATTGCCCTTGATTTTGACACAACCCCATGTCTTGCTTCTGGATGAACCTACTAGTGG ACTTGATAGTTCCTCAGCTTTCTATGTCATCCAAGCTCTAAGCAACATAGCTTGGAATGGAAAGATAGTTATTTGCTCCA TTCACCAACCAAGTAGTGAAACTTTTGAACTTTTTGATGATTTGCTCTTGCTCTCAAGCGGGGAGACTGTTTATTTTGGA GAAGCAAAAATGGCTCTAAAGTTTTTTGCTGATGCAGGATTCCCTTGTCCTACCAGAAGGAATCCTTCTGACCACTTCAT TCTGTGCATTAATTTGGATTTTGACTTGGTTGCTGAAACTCTAGCAAGATCTCATCATTTAAGTCTTTCAACATCATCCA ACTCGGTAGTCGGCATGAAAACAACAGAGATTAGAGCAGCACTCATTGAGAGTTACAAAAGTTCAGACCTAATGGTCAAT GCAAGAAGAAGAGCTCAACAACTGAAACAGCCCAATGAAGATGAAGAACAAGTAATTGAGTCCAATCTAAGGAACACTAC TAGCTGGTTCAGACAAGTATGCACATTGACACAGAGATCTTTCCTAAACATGACTAGGGACATTGGCTACTACTGGTTGA GGATCATATTCTACATAGCAGTGTCAATCTGCATAGGTACACTCTTTTTCCATATTGGAACAAACAGCAACTCAATCTTG GCTAGAGCAAAGTGTGTGTCTTTCATCTATGGGTTCATGATTTGTTTGTCATGTGGAGGATTGCCATTTTTCATTGAAGA ATTGAAGGTGTTCTATAGTGAAAGGTCCAAAGGGCATTATGGAGAGGCTGCATTTGTACTATCAAACATTATATCATCAT TTCCTTTCCTTCTTCTAATATCACTCTCCTGTGGGATAATTATCTACTTCATGGTGCAATTTCATCCTGGTTTAAATAGC TGTGCATTTTTCTGCATCAACTTATTCTGCTGCCTATCTGTTGTTGAGAGCTGCATCATGGCTGTAGCCGCAGTGGTCCC CAATATGATGATGGGCATAGGAGTAGGAACTGGTGTTATAATTTTCATGATGATGGCCTCCCAAATATTCAGACCACTAC CTGACATTCCAAAGTTCTTTTGGCGCTATCCCATGTCCTACCTCAGTTTTGCTACTTGGGCAGTGCAGGGACAATACAAG AATGACATGCTAGGGCTTGAATTTGATCCTCTGGTATCTGGGAACCCTAAAGTTTCAGGAGAGCAAGTCCTAACAACGGT GTTCGGGGTTCCACTGAATCATGGCAAATGGTGGGACTTAGCAGCACTGGTTACTCTACTATTATTTCACAGAATGCTTC TTTTCATAGTTCTTCATTTTCGTTGCTGCAAAAGAATGAAATAA
Protein sequence (LotjaGi1g1v0671800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVKRRDSALPLILTQPHVLLLDEPTSGLDSSSAFYVIQALSNIAWNGKIVICSIHQPSSETFELFDDLLLLSSGETVYFG EAKMALKFFADAGFPCPTRRNPSDHFILCINLDFDLVAETLARSHHLSLSTSSNSVVGMKTTEIRAALIESYKSSDLMVN ARRRAQQLKQPNEDEEQVIESNLRNTTSWFRQVCTLTQRSFLNMTRDIGYYWLRIIFYIAVSICIGTLFFHIGTNSNSIL ARAKCVSFIYGFMICLSCGGLPFFIEELKVFYSERSKGHYGEAAFVLSNIISSFPFLLLISLSCGIIIYFMVQFHPGLNS CAFFCINLFCCLSVVESCIMAVAAVVPNMMMGIGVGTGVIIFMMMASQIFRPLPDIPKFFWRYPMSYLSFATWAVQGQYK NDMLGLEFDPLVSGNPKVSGEQVLTTVFGVPLNHGKWWDLAALVTLLLFHRMLLFIVLHFRCCKRMK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 210 | 210 | - | – | |
| PANTHER | 3 | 462 | 460 | 2.9E-231 | – | |
| PANTHER | 3 | 462 | 460 | 2.9E-231 | – | |
| Gene3D | 4 | 91 | 88 | 4.0E-15 | – | |
| SUPERFAMILY | 12 | 102 | 91 | 2.6E-13 | ||
| Pfam | 191 | 397 | 207 | 5.5E-35 | ||
| Phobius | 211 | 233 | 23 | - | – | |
| TMHMM | 211 | 233 | 23 | - | – | |
| Phobius | 234 | 244 | 11 | - | – | |
| Phobius | 245 | 265 | 21 | - | – | |
| TMHMM | 246 | 265 | 20 | - | – | |
| Phobius | 266 | 284 | 19 | - | – | |
| Phobius | 285 | 310 | 26 | - | – | |
| TMHMM | 290 | 312 | 23 | - | – | |
| Phobius | 311 | 321 | 11 | - | – | |
| Phobius | 322 | 343 | 22 | - | – | |
| TMHMM | 324 | 346 | 23 | - | – | |
| Phobius | 344 | 348 | 5 | - | – | |
| Phobius | 349 | 367 | 19 | - | – | |
| TMHMM | 350 | 372 | 23 | - | – | |
| Phobius | 368 | 378 | 11 | - | – | |
| TMHMM | 379 | 396 | 18 | - | – | |
| Phobius | 379 | 396 | 18 | - | – | |
| Phobius | 397 | 439 | 43 | - | – | |
| TMHMM | 438 | 460 | 23 | - | – | |
| Phobius | 440 | 460 | 21 | - | – | |
| Phobius | 461 | 467 | 7 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. |
Expression pattern of LotjaGi1g1v0671800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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