Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

LotjaGi1g1v0675700.1

Overview

Field Value
Gene ID LotjaGi1g1v0675700
Transcript ID LotjaGi1g1v0675700.1
Lotus japonicus genome version Gifu v1.2
Description SOUL heme-binding family protein; TAIR: AT3G10130.1 SOUL heme-binding family protein; Swiss-Prot: sp|Q9SR77|HBPL1_ARATH Heme-binding-like protein At3g10130, chloroplastic; TrEMBL-Plants: tr|A0A151TVP2|A0A151TVP2_CAJCA Uncharacterized protein; Found in the gene: LotjaGi1g1v0675700
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr1:124277922..124283206) extracted from Lotus japonicus Gifu genome v1.2.

GAGAAGTTTGAGGGAGAAGAAGGAGAGGTTTGAGGGAGATGAGGTATATGTTTTGAGCGCGGTGGTTCGTTGGAAAAAAT GGTGGGAGAAGGAGGAATAGGAAGAAGAGGGAAAACAGGGGAATAACTCAATTTGATGAACAAAATTTGAAAGATTAAAA CTGATAAAAATATTTTTAAAATGGTTTATGATGTCATAAAGACAAGTTATTTTTTTTGGTGCAAAGGATACGATCATAAA GACAAGTTATAATCAAATTCACAACCACCAGTGTAGCAGAAAATCGCATCTCAACAGAAATTCAAAAAGCGCGAAGAAGT AATTGAGGTTCATCAATTTCAATTCCCAGAGAAAAAAACATGCTTCCTCTCTGCAACGCTTCTCTGAGTTCACAATCGAG CATCAGAACTTCCATTCCTGGAAGACCTAACATCGCTATCACCAACTCCGCGTCTTCCAGCGAGAGAATCAGCAACCGGA GAAGAACCATGTCTGCCGTTGAAGCTCGAAGCTCACTCATTCTCGCCCTTGCTTCCCAAGCCAACTCTCTCACCCAGCGA CGTAAATGTTAATCACAAAATAACAAAAATATTCTACTTAACTTTTCGTGATTTTCTCTGCAATCTTCTTCCTAATCAAT TTTTGTGCTGCAGTTGTAGTGGACGTTGCTACTGAGACCGCAAGATACTTGTTCCCGAAGAGACTTGAAAGCCGCACCCT CGAGGAGGCGTTGATGGCAGGTAGTAAATTTTCCTTATTGAATTTTCAAATTGCACTTAATTTGCTACATATTGATTATT TCAGTGTTTGAGCTTCATTGTAGTTCCGGACCTTGAGACTGTCAAGTTCAAAGTTCTTAGTAGAAGGGACAATTATGAGA TCAGGGAAGTTGAGGTATATTGTGTATGCTTTTAGCTACCTTTCTTTCTCTGACATAGAATTTGAACTTGTGCATTTTTT TCCTTAAATGAATAGACCTAATGAGATGAAAGCACTGGTGCTCAGTTCAATTCTATTTATTTCCTACAAGGACAGTGTGA TTTCATCATTTTCCTGCAATTGTGCATATGTGCTTAACTTTCTTTATCATGAATCGTGATTATTGCACTCAGAGAACCTA GTGTAGGATATATTATGTTTCCAGCATTCGATTTTTAGCTGCTAAACCCTAGAGTTGGGAGACTGGATGATGGATCAGAT AGTTTACTTTATGTTCATTTCATGGAATGATAAGCTGATTTGCTGTTATTGAACTCTCTTTATCCCAAATACTTGCAAGT TGTTGCCTTAACACTTCCATGGAATGATAAGCGCTGTGTCATCACTAACAAAGTGTCTGCTCTTCGAGATGTTTCACCTT CACCTTGATTTGATGATCATCTTTGCAGCCTTACTTTGTAGCGGAGGCTACAATGCCTGGGAAGAGTGGGTTTGACTTCA GTGGGGCTTCTCAGTCCTTTAATGTCCTAGCTGAGTACCTTTTTGGTAAGGTAGTTATACATTTTAGAACCGAACTGGAT TCGTGCATTCCAAAATTTTACTGGGTTGCTTCTGGTCACTTCACTTCTTTGTTTCGCCTTCTATTTTGAGACAAGATAAA AGTTATAGATGTGTGCTGTTGTTGTGGTGGTAGAATACATTGAAGGAGAAAATGGAGATGACTACACCTGTTTATACAAG TAAGAATCAATCTGATGGGGTTAAAATGGATATGACAACTCCAGTGTATACAGCAAAGGTATTATGATTAGTTTCCACAG AATTTGTGAAATATCTCGTTTATAGATTTATCTTTGCTTGTTTGTTTTCTTACGCTTTGCTTTATGAATTCATTTCTACA AAGATAACTGTAGAGACATGCCTTTTCATATCATGGTAACACTAGCTCGTATTGTAGCTAAACAGCCAAAACTAAGAGCC CTCTAGATTCTTGAATAATTACACCTTACTTATTTTCAGTCTGACTATTAGACCTACCATTATTCTCAATTTCAAAATCC AGTTTCCTAGTATTCGGGTTCAATTTAATCAATTAAGAGTTTGGGACAGAATTTGTATTTTATTGACTTACATAATAATC AGTATACACATTGGTTTTTATAGATACAAGGATTTACCCTAAACTAGGAAAGGAGTAATCTAAATCAATTCCTAATCTTA ACAATATAGAAGTGTTACTAAATCACATCAAATCAGAATCATATTAAAGTATAGTAAATAAAAAACATCAACTAATATGT CAACAATATCAACTCAAACTTCAACAGAATCAAAGCTCAGTTAAGGATTCAACAATAGCTAAACCCTGACACTTTATCAG GTTGACAACATTTCATGATTTATTGGAATACATAGCTAGCACCTGAAAAGTATTTTGAAGTTATAAGTTTTTTAATATAC AGACCAACTATTATGTTAAGTTCAAGCTGTAAATGCCAGGGATTGGCTTGTAGCTTGGACAAATTAATGCTATTCTTCAT CTTAAGAATCAATATCTATCCCAATTAGGCGTCACTATAACTTTCTTTTCTCATTGTTCTTTTCCTTATATTTCCTATTT TATGTATACCCTGTTAACTAGCGTCACTTTGCATTTAACTGTGTGGATTTTGGTGATATTATATTATCTTCTGGAAGATC TGTCTTAATACTAGTGTTTACTTAGGAGCTATTTCTTCAATGTATATTTATTCTATGATGTTCTAATTTATCAATGATAT TATCTTAGATGGAAGATCAAGATAAGTGGACAATGTCTTTCATCTTGCCGTCAAAGTATGGTGCTAACTTGCCACTGCCG AAAGATTCCTCTGTGAGGATTAAAGAGATTCCCAGAAAAATAGTTGCTGTAGTTTCCTTCTCAGGTGTGCTCTCGCCTTA AAGAATTTCATAAATACATGTACACATTTAATTTAATTCCATATTTTCCCCTAGCAATGTTCATTTGAATAGTTGCAGAA AGGCATAATGCCTGACTGGAGGAAGCTCAAATAATGCACAATTTAGTTTATTACAATCGCTTATATATTTATGTGTTGAT GTGTATCTGTTCATCTGGACATGTTCTATTCTATTTTTTTTTTCAGAGTGGATGGATGTGTTGCCTTTATATTTCAATAA AATGTTAGTATGCTTGACTGTGAATCTTGGTTGGCTTACCATGAAGTTCTAATCGAGTATATTTATTTGTATGCAACATA AAAGGATAAAAGATTTGTTTGAATTTCACTTGAAGTCCTTGATCAAATATATATCTTTCCTTTGTATTCAATCAGGTTTT GTGAATGATGAAGAAGTTAAACAGCGAGAACTGAAACTCAGGGAAGCCTTGAAAAGTGATGGACAGTTTAAAATTAAAAA GGGAACTTCAGTAGAAGTTGCACAGGTTAGATCTTCAATGCAATCTTGGGGTTAACGGTCTCTGAGGCTTACCCATAGGC ACTTTCTTCTGTAACAGTAAATTATTATTTTATTTTGTTGCAGTATAATCCACCGTTTACTCTTCCATTTCAACGCCGTA ACGAGATTGCTTTGGAGGTGGAACGGAAAGATTATTAGGAACAATATTAGCCACTGTACAATCTTGAGGTACTCAATATT GATGCTCATCTTTTTTGTAAATACGTCTCGCACTCAATATGGATGCTTGACCTTTTTTTAAAAGATATGTATAATGGTGG ATTAGCCAATTCAATATATAAGTATGGCAATGTAAATGTGTGACATCGTATGGCATGAAGGAAGTTATTTATGAATAGCT GAACCTAGAGGGCTGCTGTATCAATAGGAAGATATCCCCGTCTTGCTTTTTCAGTTATATAGATACGTTTTCTGCTTTTA TTTTTTCTCGCTAAGCTTCTCCAGTAATGTTGGGACTTGGGAAGGGGGGACTTGACTAATGGATTTTCACACATTTGTTT TTGCCTGTTTTGCTCGTTACTTTATCTGTATTCTGTAGTTGAGTGAAGTGATGGATTATTCTTCAGTGGAATTTAGTCCT GTTAGAACTTATCTGATTGTAAGAGAGGCATGTTTTACAGTTTGAGATATAGAATTTCTCCTTCTTGTTTAGTTATTTCC TCAAATTTTCTAATCCTTTCTGAGGCATTAATGCTCCTTGTTATGTGCATGTAAACACCAAATAGATGACCTGTTAATTA TTAACCTTCCCCTCTTCTTTTTCTTTTTGATTTCATCTTCCTACTTTTTTATGTTCTTTTATGCTTTGTCTCTCCCAACT TTTGTAAATCCGTAAATGACTCACAAAAGCGCCCCCCCCCCCCCCCTTTTTTCCCCTCCCACGAGGTCTTCTACCTTTTC AGCATGTGACTAATCCTCCCTTGAGGGTCTCAGCGTTCCTCTAACAAAGGTGTCCACATAGGGTAACTCAAGCTACCAAT TGAGCCATTCTTACTAGTTACTCACAGATGCAATTGAAATTTCTAAGCTGATCCTATCTTTTAGAAAGTTATAGTCATGC GTCCTCCATTCTGTTGCGGCAAAAGAAAGTAAAGGTTCAGTAGATCAATTTGATATGCCAATAGGAGATTTGCTTAATAT ATGAATATGATGTTGCAATAGTTTCACCTAATCCTGCAGATTAAAGTGGCTGGGATTAAATTTGAATTAAGAATATAAAA TTAACATGTATAACAGTATAAGGTAGAAATCAAAGACTCTTTCAACGAATATGGACAGTTTACTAGAAGTTGACCTGTCT CATCAAATTATGTATGGAGTACTGATAGTAATGTGAAAATGATCCTCCAGCAGTAACAGTAAAAAAGTATCTTAAAACCA CTATGATCATATTTTCCCCATGAGCCCAAGTGTGAATGGCAAACATAATAATGTTTTCCACATCATATTCTTTTTAATGG AGAAGTTGTATCAGCATTTGAAAGATTCTTGTGATTGCATACTTTACCTTAAGTGTGGGTGGTTATAGGCTATAGCGAAC GAAATAATTTAGGAAAACGTTTTCATGCCCCTACCTGAGTGTTGTTTTCCATAATTGACCAATAAGTGATTGCTCAGTGA AATAAATGTCATGTCATATCAGATAATATAGAGTTTTGAAAACTGCATTCTAATGATTAACAAAGAGAACAATACAATCC TCTAAATTTGAGCGATCACGAGAGAGCTCCTCACTAATTTAAATGACTTCTGTTGAATTCATATTGTGTCATTCATATCG AGTTCAAGAGTTTTATGGTGCATAGAGGTCCTATCCAACTCTCGTAAGACTCTGGCACACCAAAAATGAACATGTAGTTC ATGAA
Download Genomic Sequence

CDS sequence (LotjaGi1g1v0675700.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGCTTCCTCTCTGCAACGCTTCTCTGAGTTCACAATCGAGCATCAGAACTTCCATTCCTGGAAGACCTAACATCGCTAT CACCAACTCCGCGTCTTCCAGCGAGAGAATCAGCAACCGGAGAAGAACCATGTCTGCCGTTGAAGCTCGAAGCTCACTCA TTCTCGCCCTTGCTTCCCAAGCCAACTCTCTCACCCAGCGACTTGTAGTGGACGTTGCTACTGAGACCGCAAGATACTTG TTCCCGAAGAGACTTGAAAGCCGCACCCTCGAGGAGGCGTTGATGGCAGTTCCGGACCTTGAGACTGTCAAGTTCAAAGT TCTTAGTAGAAGGGACAATTATGAGATCAGGGAAGTTGAGCCTTACTTTGTAGCGGAGGCTACAATGCCTGGGAAGAGTG GGTTTGACTTCAGTGGGGCTTCTCAGTCCTTTAATGTCCTAGCTGAGTACCTTTTTGGTAAGAATACATTGAAGGAGAAA ATGGAGATGACTACACCTGTTTATACAAGTAAGAATCAATCTGATGGGGTTAAAATGGATATGACAACTCCAGTGTATAC AGCAAAGATGGAAGATCAAGATAAGTGGACAATGTCTTTCATCTTGCCGTCAAAGTATGGTGCTAACTTGCCACTGCCGA AAGATTCCTCTGTGAGGATTAAAGAGATTCCCAGAAAAATAGTTGCTGTAGTTTCCTTCTCAGGTTTTGTGAATGATGAA GAAGTTAAACAGCGAGAACTGAAACTCAGGGAAGCCTTGAAAAGTGATGGACAGTTTAAAATTAAAAAGGGAACTTCAGT AGAAGTTGCACAGTATAATCCACCGTTTACTCTTCCATTTCAACGCCGTAACGAGATTGCTTTGGAGGTGGAACGGAAAG ATTATTAG
Download CDS Sequence

Protein sequence (LotjaGi1g1v0675700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MLPLCNASLSSQSSIRTSIPGRPNIAITNSASSSERISNRRRTMSAVEARSSLILALASQANSLTQRLVVDVATETARYL FPKRLESRTLEEALMAVPDLETVKFKVLSRRDNYEIREVEPYFVAEATMPGKSGFDFSGASQSFNVLAEYLFGKNTLKEK MEMTTPVYTSKNQSDGVKMDMTTPVYTAKMEDQDKWTMSFILPSKYGANLPLPKDSSVRIKEIPRKIVAVVSFSGFVNDE EVKQRELKLREALKSDGQFKIKKGTSVEVAQYNPPFTLPFQRRNEIALEVERKDY
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR11220:SF54
29 175 147 1.6E-87 –
PANTHER
PTHR11220
29 175 147 1.6E-87
IPR006917
SUPERFAMILY
SSF55136
95 170 76 2.56E-16
IPR011256
Gene3D
G3DSA:3.20.80.10
97 294 198 1.8E-48
IPR011256
Pfam
PF04832
168 288 121 1.0E-34
IPR006917
SUPERFAMILY
SSF55136
168 290 123 1.41E-33
IPR011256
PANTHER
PTHR11220:SF54
172 290 119 1.6E-87 –
PANTHER
PTHR11220
172 290 119 1.6E-87
IPR006917

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

Unable to find any GO terms for the transcript with the identifier.

Genome browser

Expression data

Expression pattern

Expression pattern of LotjaGi1g1v0675700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…