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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0686700 |
| Transcript ID | LotjaGi1g1v0686700.5 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Heparan-alpha-glucosaminide N-acetyltransferase; TAIR: AT5G27730.1 heparan-alpha-glucosaminide N-acetyltransferase-like protein (DUF1624); Swiss-Prot: sp|Q3UDW8|HGNAT_MOUSE Heparan-alpha-glucosaminide N-acetyltransferase; TrEMBL-Plants: tr|A0A0R0KSG2|A0A0R0KSG2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0686700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:125386722..125389023) extracted from Lotus japonicus Gifu genome v1.2.
GTGGCATTTCTCATTTACATGATCACAACCTTTGCCCTTTATGTTCCTGATTGGAGTTTTGTAGATCATGTTCATGGCAA TGAACCAAAGAGATACACAGTACATTTTCACTCTCTGTAGAGTCTTCATTCTTCAGAATTGTTACTAGACACTACTAAAC ATTTGTTTATAGTTTTTAATTATTTTTGTTAATCCTTCCATTTATTAGGTGATATGTGGCATGAGAGGGCACCTAGGACC TGCATGTAATGCTGTTGGGTATGTGGATAGGCAAGTTTGGGGGGTTAACCATCTTTATTCTCAGCCTGTATGGGCGCGCC TCAAGGTGAGTATTCACCATATGTGACCGTGATTTTGGCCGCAACAACTATGTTTATTCGCAATTTTCTAGAATATAAAG GATCTCAAAACAACCATGATGCGACTGTTATCACGAATGCAATTTAAAACCTTGAATTATTTAGGGCGTGCTTGATTTAT TTTTTATTTGCAGGCATGCACGTTCAGCTCTCCAAGTACAGGTCCTTTTCACAAAGATGCTCCCAGTTGGTGTCTTGCTC CCTTTGAACCTGAGGGCTTGTTGAGGTTTGCTGTTCATTTTTATTTTCTTCTATATATGTCAAAAAAATTAAAGTTAATT CTCAAATTAAACCCTAATATTTCTCAGAAAAATCACTGGACACCAATTTTGCGGCGACCTTGTAATTTGTGTCCTTTAGA AACGGTCACAAATTGCAGGTGCCTCAGGTATTTGCAGCAAAAATGGTGTTTACAAATCAAACTCATCTTAGACTGGTTAG TCCTGATATTAAAGAAATATCTTCCAAAGTCCTCTATTCATTCAGATGTTGATCACATTAGTTCTAAAAGGGGACTAGAG TCACTGAAACCAGAGATATTTCTTTAATTTCAAGTCTAATTTGAAGTAACTGATAAAGGTTAAGGATTAATTTGGAGGTC CCCTCTAAAAACTTGGGTTACTTTATAAACAAGTAACCTCTGTTTATCTATCTGTCTATTATTAGTAATATTAAAAAAGT TTTATTTTTATTTTTATAATTAGTTCCATATCAGCAATCCTCTCTGGCACTATCGGCATCCATTATGGGCACGTCTTGAT TCATTTCAAGGTTACTAAACTTCATTACCCTGTTATTATACATACCCTAAACTTCTATTGTTGTGTAAATGCAATTTAGT GAATGCTAATAGTGAATAAAATTTTGGCAGGGTCATTCAGAGAGGCTCAAACAGTGGGTTTCAATGGGGCTAGTGTTATT CATCATAGCCATCATCCTTCATTTCACAGATGGTAAGCTAGAGAGTAGAGACACAAACATGCCTCAAAATCAAAATCCAT CTAAGAAAAATTCCATCATGAAAATATTTTGTCCCATTTCCCATCCTATTTTCCTATCCCTCTGGTGAAATTTTGAAACA TCATTTAAGAAAACATAGGTAAGTTGGTTACAAACTTACACATGTAATTCTTAATTGATACGACAAAATTTTATTAGCGG AACATAGAAATGAGATAGAAAATGGGACGGAAGATCTTCATCTCCATTCGCAAACCTTAACAAAGTTAGCGGAACATAGA AATGAGATAGAAAATGGGACGGAAGATCTTCATCTCCATTCGCAAACCTTAACAAAGTTTTCATGGAATACTAATTGCAG CTATCCCACTTAACAAGCAACTCTACAGCTCCAGCTATGTTTGTTTCACAGCTGGGGCAGCTGCACTTGTCTTCTCTATG TTATATATACTGGTAGGTAGCATACTCTCTTTATCTCGAACCAACCATTTCAAAATTTTAAGCCGCTCGGAAAAATAATG TGCATGGTTTTATATTATAATGCTAACAATTTTTTTTAATTTGCTTTTATTTATCAAACAGATTGATGTTTGGGGGCTTC GTACACCATTCTTATTTTTGGAGTGGATAGGAATGAATGCTATGCTAGTCTTTGTGATGGCAGCTCAGGGCATCTTCGCA GCATTTGTAAATGGCTGGTTTTATGAAGATCCAAAGAACTCACTAGTAAGAAGCAATTAACCTCACTGATTTCTATGGTA TATATATGGTTTGCTCTTTATTCATAGTAGCTTGGACTGGAGCTAAATCATTTTTGCATATGAAACCTAAATCAGGTACA TTGGATCAAGAAGCATGTGTTTGTGAATGTTTGGCACTCAGAGAAGGTGGGAACTCTCTTATATGTGATCTTTGCAGAAA TCACATTTTGGGGAGTGGTTTCTGGTGTGTTGCACAAATTAGGAATATACTGGAAACTATAA
CDS sequence (LotjaGi1g1v0686700.5) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATCACAACCTTTGCCCTTTATGTTCCTGATTGGAGTTTTGTAGATCATGTTCATGGCAATGAACCAAAGAGATACAC AGTGATATGTGGCATGAGAGGGCACCTAGGACCTGCATGTAATGCTGTTGGGTATGTGGATAGGCAAGTTTGGGGGGTTA ACCATCTTTATTCTCAGCCTGTATGGGCGCGCCTCAAGGCATGCACGTTCAGCTCTCCAAGTACAGGTCCTTTTCACAAA GATGCTCCCAGTTGGTGTCTTGCTCCCTTTGAACCTGAGGGCTTGTTGAGTTCCATATCAGCAATCCTCTCTGGCACTAT CGGCATCCATTATGGGCACGTCTTGATTCATTTCAAGGGTCATTCAGAGAGGCTCAAACAGTGGGTTTCAATGGGGCTAG TGTTATTCATCATAGCCATCATCCTTCATTTCACAGATGCTATCCCACTTAACAAGCAACTCTACAGCTCCAGCTATGTT TGTTTCACAGCTGGGGCAGCTGCACTTGTCTTCTCTATGTTATATATACTGATTGATGTTTGGGGGCTTCGTACACCATT CTTATTTTTGGAGTGGATAGGAATGAATGCTATGCTAGTCTTTGTGATGGCAGCTCAGGGCATCTTCGCAGCATTTGTAA ATGGCTGGTTTTATGAAGATCCAAAGAACTCACTAGTACATTGGATCAAGAAGCATGTGTTTGTGAATGTTTGGCACTCA GAGAAGGTGGGAACTCTCTTATATGTGATCTTTGCAGAAATCACATTTTGGGGAGTGGTTTCTGGTGTGTTGCACAAATT AGGAATATACTGGAAACTATAA
Protein sequence (LotjaGi1g1v0686700.5) extracted from Lotus japonicus Gifu v1.2 Proteins.
MITTFALYVPDWSFVDHVHGNEPKRYTVICGMRGHLGPACNAVGYVDRQVWGVNHLYSQPVWARLKACTFSSPSTGPFHK DAPSWCLAPFEPEGLLSSISAILSGTIGIHYGHVLIHFKGHSERLKQWVSMGLVLFIIAIILHFTDAIPLNKQLYSSSYV CFTAGAAALVFSMLYILIDVWGLRTPFLFLEWIGMNAMLVFVMAAQGIFAAFVNGWFYEDPKNSLVHWIKKHVFVNVWHS EKVGTLLYVIFAEITFWGVVSGVLHKLGIYWKL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 94 | 94 | - | – | |
| PANTHER | 1 | 273 | 273 | 8.7E-161 | – | |
| PANTHER | 1 | 273 | 273 | 8.7E-161 | – | |
| TMHMM | 94 | 116 | 23 | - | – | |
| Phobius | 95 | 116 | 22 | - | – | |
| Phobius | 117 | 127 | 11 | - | – | |
| TMHMM | 128 | 150 | 23 | - | – | |
| Phobius | 128 | 145 | 18 | - | – | |
| Phobius | 146 | 156 | 11 | - | – | |
| Phobius | 157 | 178 | 22 | - | – | |
| TMHMM | 160 | 182 | 23 | - | – | |
| Phobius | 179 | 198 | 20 | - | – | |
| TMHMM | 187 | 209 | 23 | - | – | |
| Phobius | 199 | 218 | 20 | - | – | |
| Phobius | 219 | 244 | 26 | - | – | |
| TMHMM | 243 | 265 | 23 | - | – | |
| Phobius | 245 | 264 | 20 | - | – | |
| Phobius | 265 | 273 | 9 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0686700.5, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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