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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0687200 |
| Transcript ID | LotjaGi1g1v0687200.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Ulp1 protease family, carboxy-terminal domain protein; TAIR: AT4G18960.1 K-box region and MADS-box transcription factor family protein; Swiss-Prot: sp|A1UER2|SYP_MYCSK Proline--tRNA ligase; TrEMBL-Plants: tr|G7K006|G7K006_MEDTR Ulp1 protease family, carboxy-terminal domain protein; Found in the gene: LotjaGi1g1v0687200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:125438713..125443803) extracted from Lotus japonicus Gifu genome v1.2.
AAAATTTAATACTAAATCAATTAAAAAATAATTTAATTAATATTTATACAAATTTAATTTAAATTTACTTAATAAAACCG GTCAAACCGGTAAATTCAAAAAAATTTAAAAAAAAAAAAGCCCAAACGGGCAGAAAACCGGGTCCAGCCGGTCAAAACCG GTCTGGACCGGTCCCAAACGGTTGGATGACCGGCTAACCCGGTCATCCACTATAAATACTCCCTTATCACTCCCTCCCTC ATTAACCCTAGCCGTTTCCCCTTTCTTCTTCCTCTGCTCTTCTTTTCTTCTTCCTCTGCTCTTCCTCTGCTCTTCTTTTC TTCTTCCTCTTCTCTTCTTCCTCACAGCCAACTCCTCACCTCCTTCGACCCGCCACCTCACCGCCTCCTCACCGCCACCA AACACCCACAACCTCAAACAAAACCCACCTCTCCGCCACCAAACACCCACAACCACAACCAAAACCACCTCACCGCCACT CACCCGCCACCAAACAACCTTCACCGCCACCAAACCCGCCTCACCGTCTCCTCATCGCCACCAAACACCCACCACCGCAA CCAAAACTTACCCCAGCCGCCATCAAAGCTTCAATCCGGACCCAAATCGCCCCTCAAGCACTGGATCGGAGACATGCAGG CCTTCCACCCTCCGCCACCGCCACCAGATCGGAGAAAAACAACCGGATCAAGCTTTCCTTTACACCCTTCAGCTTCTGTA ATTTTTTTTTTTCATTTTTCTTTGTAAAAATTTAATCTTCTGAAGCTTTGTAATTATTTTCTATTTTTATTGTTTGAATA AAATTGTAGGTAGTTCATGCAATCTGTTTCTACTATTTCTTCCCTCTGAAATCTGTTGGAAGTGAATGTGAGAGAAAGTA TGTTATTTTAATTAAGAAACTGATAAAGCAGAGTTGCTTGCAGAAGCAACTCTGCCCACTTTTCCTTAGCTAAGGAACCT TAAGGAACCCTGCTCCAATGGGTAAGAAACTGGCCCTTGGTTTCTTAGCAACTCCAACCTGGTTAAGAAACCAGCGTTGG AGTTGCTCTTATCCCCAACTCATCTGAGAGGTACCACCACTCTAAACAACCACCACTTAGAAAACCAAGGATCAGACTTA GCTTTGTGGAGAAACATTTCATTTCAAAACCACTTTTTGGAGATGGCAAGGTACGTAAAGATGAACTTAGCTTGTTGTAG CAACTTCTGAAAACCTTTTCAAACCTTGAGCCTAAGCTTTTGGGCAAAGTTGGCTTGTGTTTAAAAAAAACAAATTATTT TAAGGCTTTGTTGGGTTCTGATAGCTGACATTTATGTGCAGACGTGAGGAGAGACAACATCAAGGGGTGGGAGATGATAT GGATGTTGATGCTGAACAAACTGAACATGGGAACCCAGAGGCTGAAACAGAGGAGCACATAGAAGCTGAGGCAGAAGCTG AAATGCATCATCTCAGGAACATGGTACGAATCATGACCTATGTGCCTTTTTTTCTTTGACTGTGTTGTTTGTTTTGAAAA ACTATGTTGTTTGTGTTGAAAAGTAGAAAGGTTCAAATGGAGCCTGTATTTTAAGGTTTTTTAAAAAGTTTTTGGCTTGT CTTTGACTATTGTTGTTGGTTCTGGACTTGTTTGTGGTTTGTCCTTGTCTCATGTTGTTGGATCTGGACTTGTTTGTGGT TTGTCCTTGTCTCATGTTGTTGGATCAGGACTTGTCTGTTGTGGATAACGTATTTATTAATTAATATCAGCTATTTGGGT TTGAAACAACAAAAAAAAAATTAAGGGTTGCCATGTGGTCCACTATTACTATTTCACTTGACTAGGATGAATGAATACGA ATGAGACATTGCAAGTGGAAACCTGGAGAATTTGGAAAATGGGGTTGTATTTTAGGCCCCTGCCTTTTATCAGTAATGAA TGAATATCCTGACATGCTTATGCCTTTAATTTGAAGTTAGAAATTGTAAAACTACATTTCTTTATGCTTAGGAATTATAA ATGCTTCGTGTTGTCCTAACTACTCTTTTGCCACTTATACTTCCTGCGTCAACTACTCATTTTGTTATTTATACATCATG CATGAACATCCCTACCCGTACAGCTTGATCAAGTGGGAAGACGTGATTTTCTTGAAGGGTTATTCACCTTACTGAAGGCC TTGAACAGCCTCATTGGTTACATGAAGGTGAAATTTTTTGCTCATAGTCCTTGAGATTATTCACCTTACGTGATTTTTTC GACTAAAAACATATTATTCTAACTTGGGTATTTTTTACAGGCAATGAACCGTCATGTGGGCAAGATAGATGAATAAATTT CTAACAATACCAAGCTTCTTCAAAGTCTGGATGAAAAAGTAAGTTCCTTGCTTCAGAAGAACACAATCGACACACCAAAG GCCACTCCAATTGTATTTCAGGGGAGCTGCTCACAGCATACTAGTGGTGTTCTTAACCTAAATGAGACCCCAACTGCTAC ATTTCCTCCTAGACAATCTGCATCAAAAGGGGTACTGAAGGAAAGCCATACCTTAGATGCAGTGAAAAAAAACTTGGATA TGTCCATAGACCTGACACTGTCTGATGATGATCAAGTGGATCTGAACCAACCACCAAAGGAGGGACTGACCATTATCATG GAAGGACAAACAGAACCTTTAAGGTCGGAGAAAGTACCCAAAAAATCCACGAAAAAGAGGGCAACTTTAACGGGGAAAGA TTTGCTCAAAGGTTTGGAGGTTGATTTTGACGTTTCTGACTCAGACTCTGATGATTGCAAGATTGTGGACGGTCCAACAC AATCTACAAAGACTTTATCTGGGATGAAAGATGTGCCTAAGGAACGCAAGACACAGCCTCGTCAAGTATGTCCACATACT GCAATTGTTTTAAATTTACATCATAAAGCTATGTTTCCTTTTCACATCTCAGCCACTACTTTAATTGTAATTTTCCATGA CATAGCAGGACAAAGGGAAAGGGAAACAGGTTGCAACTGACGGTACGCCAATGCGTAGACCAAGAAAAATTGCTAGACAA CATATTTCACCGGACCCAAACAAATGTAAAAAAAAGTGGGCCACACTTTGCCAAAGGTGACTATAATTCACTCAAATTAC TTTATGGCCAAAAATTGGTATGAAATATTTAATGGTTCTTGTTTTTGCGTTTGGCATGAATAGTCAATGGAATCAAATTT TCGCCCCTCGCAAGATATGTTGTTAACCGATGATGAACTCCGTCTAAGCGCATACATATTTCAGCTTAAAGGTGACCCAA GGTATGTCAAATGCATAATTATGATGACACCATGACATATATTCATAATGTTGGAATGGAAATATGACTATTTTGACATT TTTGAACAATGTTCACATGCAGTGAGGAACTGTTGAAAATTGGATCCACAATAGGGACAAGGCAACACTTTATGACTCTA TGCCCAGATAGGGTTATTGACAAGAAGGTTTGTTATGATTAAGGCACATATGATTAATTATAATTTGCTGAACTTATTAT TTTATGCTTGTGAAGCTTAACTGGAATTATTTTCAGATAATTGAACTCATGGCTGTGAAACTTAACTGGAATCAGCATAA CACTGACGCTCAACCAGCCTGGATATTACCACCCCGCTTTGCGGTATTTATTAGTCTGTTTTTTTCTGGTCAGCGTTTTA TACCCACCCTTCACATTGCTTACTAATACCACACTTGCAGGAGGCTGTGTTAAAGGGAAAGATGTCGGAGGATTTGCTTC CTGACTTTGCAGAAGAATGGATGGCCGCATTTGAAACTCTCAAATATGTAGGTGGTATTTTTTTTTATGTCTTAAAGTAA CTAAAACACCAACTTATGGGTTCTTTTTGGTTCAGATCTATGTGCCTATCATGGAGCCAAATGGACACTGGTACTTAATG GTGGCTTCCATGGATGAAACAGTGATTTACTTGGTTGACTGTCACCTCAACTCACAACAAACTGCTGCTAGGAAACGCTC AATCAGGACAATTGTATGTCCATGTCCATGTCCATGTCAACTTAACTATATTTATGTGCATATCATTTACCATCATGTTG CATGATCATATTTATTAACACCATTTCAAATTTTGCAGGGGAAAGTCATTGGTCGTATGATGTTTTCTTCATACTACCCT CATAACTACCTGGAAGGAAACTTTGAGCTGGGCACATGGGATATTGAGGAAGCAAGGTCCTGTGAAGACCACTCAACGAG GTAATTAGTTAACAAAACTCCTCTAGTTATTACTTCTAGTGTACTAGAAACGAATAACTTCTACAAATACGGAAATATTC AACTCTTTTCCACACTACGTGGCTTTTAGTTAAAAGCCAACTCTACTTACGCCTGTCATCAATACTTCTAAATCTGGGAT CCATTTGTAATCACTTTGTGTTTAATTTGGTTTTCTAGTACTCAACAGTCCACCATATGCACGTTGGAGTGGATGCAAAT GGATGATGTGTTCATGTCCAACTTACTCCCTCGGGTAAGCAGGCGACAACTTAGTATTTTTCGTTACCAACTTCCTCCCT CCCACTTGCTAGTACTAATTGCTGTAACGTGTTCCACGTCTATGTACTACAGGTGGAAGATAAACTGGTGAGGATGAAGG CAGCAATGAAACTACTTAATGGGCCTCACAATGAGAATTTGGAAATGGTGGTTGAAAAAGCACAAAAGTTCTGGGAGAGC CAGATGTCTTGTGAATAGTCATCTTTGCTGAAATGGAATGTGTTTGCCATGGAATGTGAATGGCATTATTTTTTGTAATA TTTAGTGCTGGTGGGTACCTAGACTTGGTGTACAATGGCCTTCCGTCTATCCTTCTTTTTGACTATGTCTGTAACGTGAT GGGCAGTGTGGGATTATAGTACCCCACTTGCTTGACAACAATTGACTTCTATCCTTCTTTTTTACTACGTCTGTAACTCA ACTGGATGATATTGTAAGTAGTGTATAATTATGTTATGTGTGCTTGATAAGTCCTATTCTACTAAAAGTATGGCTCTATG TCATATGTGCTTGTTAAACCTATTATACTGAAAATATATTAGTCCTTCATT
CDS sequence (LotjaGi1g1v0687200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAATCAAATTTTCGCCCCTCGCAAGATATGTTGTTAACCGATGATGAACTCCGTCTAAGCGCATACATATTTCAGCT TAAAGGTGACCCAAGTGAGGAACTGTTGAAAATTGGATCCACAATAGGGACAAGGCAACACTTTATGACTCTATGCCCAG ATAGGGTTATTGACAAGAAGATAATTGAACTCATGGCTGTGAAACTTAACTGGAATCAGCATAACACTGACGCTCAACCA GCCTGGATATTACCACCCCGCTTTGCGGAGGCTGTGTTAAAGGGAAAGATGTCGGAGGATTTGCTTCCTGACTTTGCAGA AGAATGGATGGCCGCATTTGAAACTCTCAAATATATCTATGTGCCTATCATGGAGCCAAATGGACACTGGTACTTAATGG TGGCTTCCATGGATGAAACAGTGATTTACTTGGTTGACTGTCACCTCAACTCACAACAAACTGCTGCTAGGAAACGCTCA ATCAGGACAATTGGGAAAGTCATTGGTCGTATGATGTTTTCTTCATACTACCCTCATAACTACCTGGAAGGAAACTTTGA GCTGGGCACATGGGATATTGAGGAAGCAAGGTCCTGTGAAGACCACTCAACGAGTACTCAACAGTCCACCATATGCACGT TGGAGTGGATGCAAATGGATGATGTGTTCATGTCCAACTTACTCCCTCGGGTGGAAGATAAACTGGTGAGGATGAAGGCA GCAATGAAACTACTTAATGGGCCTCACAATGAGAATTTGGAAATGGTGGTTGAAAAAGCACAAAAGTTCTGGGAGAGCCA GATGTCTTGTGAATAG
Protein sequence (LotjaGi1g1v0687200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MESNFRPSQDMLLTDDELRLSAYIFQLKGDPSEELLKIGSTIGTRQHFMTLCPDRVIDKKIIELMAVKLNWNQHNTDAQP AWILPPRFAEAVLKGKMSEDLLPDFAEEWMAAFETLKYIYVPIMEPNGHWYLMVASMDETVIYLVDCHLNSQQTAARKRS IRTIGKVIGRMMFSSYYPHNYLEGNFELGTWDIEEARSCEDHSTSTQQSTICTLEWMQMDDVFMSNLLPRVEDKLVRMKA AMKLLNGPHNENLEMVVEKAQKFWESQMSCE
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 7 | 209 | 203 | 1.9E-5 | – | |
| SUPERFAMILY | 13 | 156 | 144 | 1.04E-11 | ||
| PANTHER | 17 | 159 | 143 | 1.0E-13 | – | |
| PANTHER | 17 | 159 | 143 | 1.0E-13 | – | |
| Pfam | 110 | 179 | 70 | 4.0E-5 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Proteolysis | The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds. | ||
| Molecular function | Cysteine-type peptidase activity | Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile. |
Expression pattern of LotjaGi1g1v0687200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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