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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0695100 |
| Transcript ID | LotjaGi1g1v0695100.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | BED zinc finger,hAT family dimerization domain; TAIR: AT3G42170.1 BED zinc finger and hAT dimerization domain-containing protein DAYSLEEPER; Swiss-Prot: sp|Q9M2N5|DSLE_ARATH Zinc finger BED domain-containing protein DAYSLEEPER; TrEMBL-Plants: tr|V7CA32|V7CA32_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0695100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:126289947..126295139) extracted from Lotus japonicus Gifu genome v1.2.
GGACTTTAAGAGTCCAAATTGTGAAATCCAAAAAGCATTACCCTAGTTTTCAACTCTTTTGAGTTTTGAGGACCAGCCAC CTCTCGAAGTCGAAGGTCCAATTAGGTTATCGGGTTGGTTTCCAAAGCCCAATCTCCCTCTGCTAAACCCCAGATCTCTC TTCCCGACCTCCCGGAGCTCGCTTTCCGAGCTTCCCACCACCGCGTTTTCACCGTCAGATTCTCTCCACACACTGCTGGT ACATCCCAAACCTAACTTCACTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCAGTTTTCTCTTCAACTGCGATCTATTTTT TCGAAATTCTATAGTGGTATAAATGATCGTTCTGCATTGATCGTTGAAACTAGTTTGCTCGGTCGTGGTTTGCTTTTGTT TTTTGCTTTTGAAGTGTGATATATAGTTTTTATCAGTTCTAAGCTGTGATTTAGTTTGAGCATTTGATTTGGATTGGATA TATATATATATATATATATATATATATATATAGGCACTATCTTGGCATGTTGCTAACAAAGTAAGAATGTAATACATTTG GTGAAGAGTTTTCTCTAAACTCATGCCAAGTGCAATGCTTATAAGCTGATTTTTCTATTTCATATTGTTAGCATAGCCTT CCTTGGAGTTTTTCTACACTCTGAAAGTTGATAACAGGTTAGCCAAAACTAGTTTAATAGTGAAGGGGACCAAAAATAAT ACTTTGTTGGAGTTTTCTATTAGACAAATGCAATGTATGTTTAATTGTTAATGCTAATAAAATAGCTATATATTTTTCAT GGGAGGGTTGATAACTTGATACCAAATGCTCAAATGATTTCATGTTATCTACTTTGGTATGTCCATGCGTGGAAAATGTT TCCTGATTGTGATTAACGATGAATATCAATTCTAATAGTTAGTTAATGGTTTCTTCAGGGTAAAGCAGGAAGATATATAC CAAGACAAGGATGGCTACCCTTGAAGAAGGCGAAGTGGTGGTGGCCCATGTTACAGATGTGACAATCAGCTCTGACAAGA TGGGTACTCTTGAAGACAACAAATTGGCGGTGGCCCCTGATGTAAAAAGTGAGTCAATTTGTACTGATTCTCATTCTTGC TATGACCTGGCAAAATCTGATACTCTATCTAACAGTAATGTTCAAAATTCAGGTTCTCAGCACATCAAGAATCTCTCCAA TTTCGAAGCGCAACCTAACAAGGGACTTTCTGCATCTGAAACCCAGGCTACTGGTGGTGATGCAAATGAGTTGGACAACG CTGAAGAATCTCTGAAACATGAGCTGGGAAATTCTGAACCAGAATCCAACCACCAGTTGGGCAATGTTGAGACCCCAAAC AACAGTCAGCCAGTTGCTTCGGAGGCAACACTTGACAAGCCGGTGGTCAGCTCTGAAGCACAACCTAACAACCAGGTGGT CAATTCTGAGGCGCTGTCAAACAATGGTGTGGCAAATTCTGAAATTCTAACTAGTCATAATGGGGCAATATCTGAAACTC AAGGCAGCAATGAGGTGGTGGTATCTGAAACACAGTGCAGCAATCAGGTGGTCAATTCTAAGGCTCTGCCAAACAATGGT GTGGTTAATTCTGAATCTCAAGGTAGTAATAATGTGGCAATATCTGAAACTCAAGGCAGCAATGAGGTGTTTATATCTGA AACACGGCATAGAGATGAAGTGGTTGTATTGGAAACACAGTACAGCAATGGGGTGATTGTATCTGAAACACAGCACAGCA ATGAGGTGGCTGTATCTGAAACACATCACAGCAATGAGATTATTGAATGTGAAACACAGCATGCAGAAGAGGTGGTTGTA TCTGAAACACAGCAAAACAATGAGGTGATTGTATGTGAAACACAGCACGACAATGAGATGGTTGTATCTGAAACACAGCA AAACAATGAGGTGATTGTATGTGAAACACAGCACGGCAATGAGGTTATCATGTCTGACTCGCAGCCTAGCAGTGAGGTGG TCATGTCTGAGACACAGCCATGCGGTGACGTAGTCATGTCTGACACACAGCTGGGCTGTGAGGTAGTCATGTCTGACATC CAGCCCGTCACGTATGAAGCACGGATCAGGAGTGATATGGTTGGGTCCAGTACACTTCATAGCAATGAGGTAGCCATGTC TGATGCACAAACCATTGATGAGACCGTCATGCATGAAGCCCAGTTCAGAAATGATGTGGTTGTGTCTGAAGCTCTATCTG AATTTGAGTTGGCCGATTCCACCATAGATCCCAACATTCAGCTCTCCTATTCAGAAACTCTTCATGATAATCATCAATTC AGTGATCTCGATTTGATTCCTGAAGATCAACTGCCACAACCTGAACCGTTGCCCAATTCTGAATCACCACCTAGATCTGA ACCACTGGCAGACAGTAATCATGCAGACATGAAACCAGTACCCCATAATCATCTACCTGAGTATGAAATGTTGCCCAACA ATCATCTAGACCATTCTGAGGCACTGGCCAATTATCAGCTAGCTAATAATGAAACATTGTCCCATGATCAGCTAGCTAGT TCTCAAATGATGACTCACTATGAGCTGGTAAACAGTGAACCACTGCACAGCAATCAGTTAATCACTTCTCAAGGACACTA TGAGATAGTCAGTGCCCAAACTATTCCCAGCTATGAGATAGTAAATGCTGAAACTTTACTTAACAATGAGGAACATACTC CAGATACACAGCCTAATAAGAGAAGGAAAAAGAAGTCTATTGTCTGGCAACACTTTACCATAGAAACAGTCGGTGATGGA TGTAGAAGGGCATACTGCAATGAATGCAAGCAAAGCTTTGCCTACAGTACCGGTTCAAAAGTTGCTGGTACCAGCCACCT TAAACGACACATTGCCAAGGGGGCGTGCCCAACTCTTCTGCGTAACCAAGACCCGAATCAGGAAACCCCATATACTCCAC ATCAAAAGGGAGATGTTGTGCTGAGGGGAGGTGGTGCTAGCGTTACTAGCACACCAAAGCGACGTTATAGATCCCCTAGC ACTCCATACATAATTTTTGACCAAGATCGTTGTCGTCATGAGATTGCTAAGATGGTCATTATGCATGATTACCCCCTTCA CATGGTTGAGCATCCAGGATTTGTTGCATTTGTCAAAAATCTGCAGCCTCAGTTCAACATGGTGTCCTTTAATACTGTTC AAGGAGACTGTGTTGCTGCTTACCTGAATGGTAGGTCATTCCTTGTGAAGTATTTTAGGGGATTACCAGGACGTGTTTGT CTGACACTTGATGTTTGGAGCTCAAGTCAATCTGTAGGCTATGTGTTAATTACGGGACATTTTTCGGATAGTGATTGGAA GTTGCACAGGAGAGTTCTCAATGTTGTGATGGAACCATACCCTGATTCTGACACAGCTATCAGCCATGCTGTTGCTGCTT GCATTATGGACTGGAATCTGCAGGGCAGGATGTTTTCTATCACTTGTAATCAGGCACTGACTGAGGTTTCTCTTGAAAAT CTCAGACCCTTGCTCTCTGTGAAGAATCCACTTATCCTCAATGGTCAGTTGCTAATTGGAAATTGCATTGCCCGTACTTT AAGCAATGTTGCAAATGATTTGTTGAGCTTGGCACAAGATATAGTCAGTAAAATCCGGGATAGTGTGAAATATGTGAAGA CTTCATATATACATGAGGACAAATTCCTGGAACTCAAACAGCAACTTCAGGTCCCCAGTGAAAGAAGCCTTTTTATTGAT GACCTAACCAAATGGAATACAACATATGAAATGCTGGTTGCAGCTTCTGAACTAAAGGAAGTGTTTTCTTGTTTGGACAC GTATGATCCTGATTACAAAGGAGCCCCATCTATTCAAGATTGGAAGCTTGTTGAGACCCTCTGCACATACTTGAAGCCCC TTTTTGATGCAGCCAACATTCTTCTCACGACAACTCATCCAGCTATTATTACCTGCTTTCATGAAGTTTGGAAAATGCAG TTGGATCTGGCTCGTGCTGCTATGAATGAGGATCCATTCATTAGCAACCTAACTAAACCTATGCAGGAAAGGATTGGTAA GTACTGGAGAGATTGTAGTCTGATTTTGGCTACTGCTGTAGTTATGGATCCTCGTTTCAAGATGAAGCTTGTTGAGTTCA GTTTCACAAAAATATATGGCAAGGATGCCCATGTGCATGTCAAGATTGTCAATGACGGAATTCATGAGCTGTTTCACGAG TATGTTAACTATCCTCTGCCACTCACAGCAGCATATGCAGAAGGAGATGCTGGAAGCCTCATTGGGGAATCCCAAGGAGG AACTCTGACGACAGATAATGGCCTTACTGATTTTGATGCCTATATCATGGAAACTAGTAGCCAACAGATGAAGTCTGAAT TGGACCAGTATTTGGAGGAATCATTGTTGCCACGTGTTCCGGACTTTGATGTATTAGGTTGGTGGAAGATAAACAAAGTC AAGTACCCTACTCTTTCCAAGATGGCCCGGGACATATTGTCTATACCAGTTTCTACTGTTCCTTCTGAATCTTTCTTTGA TAGGAAAAGCAAAGAAATGGATCAGTATCGATCTTCCTTGCGACCAGAGGCGGTGGAGGCCCTTGTATGTACCAAAGACT GGATGCAGTATATAGCAGCTGAAATGGGCATGTGAAAATGGAATTCTGGATTTTTTGTTGTACCATGTATGATGGTAGGT TCAGTGGTATTTTACTTTAAGTCCTTAGTTCTCATTGGTTTATATTTGTAACATTTAAGTGATTATTTCGATGAATGGAC GTGGATATTTTAAATCATCTAGCTTTTGTTTTAGATGCTAGAATAGATCCATCCTGCCTTTCCATTATGCGTCATTGCAA GTTTATAGATTCAGGAGCTGCATATAATTGGAAAATAGCACTGACAGTGCATATCCATTAAACTCTAATTGGAATGGACT AGTTTTAATTTTATAGATTGCTGTTTCCGACTACTTATAAGAAATTGAGCATGCGTAGTATCTTTTCAAGTTTTTCAGTT ATCTGTACCCTGGTTTTTTTTTGGTCGAATCTGTACCCTGGTTTGATCATCAAATTATGTCAAGCTAGTGCAAAGGAAAC CTTGAGCTAGTGATGCCTTTTGGTCCAATTGCTTGTCTAGTATCTTGTCAAGTCTTCCAATTCTTGATTGTTG
CDS sequence (LotjaGi1g1v0695100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTACCCTTGAAGAAGGCGAAGTGGTGGTGGCCCATGTTACAGATGTGACAATCAGCTCTGACAAGATGGGTACTCT TGAAGACAACAAATTGGCGGTGGCCCCTGATGTAAAAAGTTCTCAGCACATCAAGAATCTCTCCAATTTCGAAGCGCAAC CTAACAAGGGACTTTCTGCATCTGAAACCCAGGCTACTGGTGGTGATGCAAATGAGTTGGACAACGCTGAAGAATCTCTG AAACATGAGCTGGGAAATTCTGAACCAGAATCCAACCACCAGTTGGGCAATGTTGAGACCCCAAACAACAGTCAGCCAGT TGCTTCGGAGGCAACACTTGACAAGCCGGTGGTCAGCTCTGAAGCACAACCTAACAACCAGGTGGTCAATTCTGAGGCGC TGTCAAACAATGGTGTGGCAAATTCTGAAATTCTAACTAGTCATAATGGGGCAATATCTGAAACTCAAGGCAGCAATGAG GTGGTGGTATCTGAAACACAGTGCAGCAATCAGGTGGTCAATTCTAAGGCTCTGCCAAACAATGGTGTGGTTAATTCTGA ATCTCAAGGTAGTAATAATGTGGCAATATCTGAAACTCAAGGCAGCAATGAGGTGTTTATATCTGAAACACGGCATAGAG ATGAAGTGGTTGTATTGGAAACACAGTACAGCAATGGGGTGATTGTATCTGAAACACAGCACAGCAATGAGGTGGCTGTA TCTGAAACACATCACAGCAATGAGATTATTGAATGTGAAACACAGCATGCAGAAGAGGTGGTTGTATCTGAAACACAGCA AAACAATGAGGTGATTGTATGTGAAACACAGCACGACAATGAGATGGTTGTATCTGAAACACAGCAAAACAATGAGGTGA TTGTATGTGAAACACAGCACGGCAATGAGGTTATCATGTCTGACTCGCAGCCTAGCAGTGAGGTGGTCATGTCTGAGACA CAGCCATGCGGTGACGTAGTCATGTCTGACACACAGCTGGGCTGTGAGGTAGTCATGTCTGACATCCAGCCCGTCACGTA TGAAGCACGGATCAGGAGTGATATGGTTGGGTCCAGTACACTTCATAGCAATGAGGTAGCCATGTCTGATGCACAAACCA TTGATGAGACCGTCATGCATGAAGCCCAGTTCAGAAATGATGTGGTTGTGTCTGAAGCTCTATCTGAATTTGAGTTGGCC GATTCCACCATAGATCCCAACATTCAGCTCTCCTATTCAGAAACTCTTCATGATAATCATCAATTCAGTGATCTCGATTT GATTCCTGAAGATCAACTGCCACAACCTGAACCGTTGCCCAATTCTGAATCACCACCTAGATCTGAACCACTGGCAGACA GTAATCATGCAGACATGAAACCAGTACCCCATAATCATCTACCTGAGTATGAAATGTTGCCCAACAATCATCTAGACCAT TCTGAGGCACTGGCCAATTATCAGCTAGCTAATAATGAAACATTGTCCCATGATCAGCTAGCTAGTTCTCAAATGATGAC TCACTATGAGCTGGTAAACAGTGAACCACTGCACAGCAATCAGTTAATCACTTCTCAAGGACACTATGAGATAGTCAGTG CCCAAACTATTCCCAGCTATGAGATAGTAAATGCTGAAACTTTACTTAACAATGAGGAACATACTCCAGATACACAGCCT AATAAGAGAAGGAAAAAGAAGTCTATTGTCTGGCAACACTTTACCATAGAAACAGTCGGTGATGGATGTAGAAGGGCATA CTGCAATGAATGCAAGCAAAGCTTTGCCTACAGTACCGGTTCAAAAGTTGCTGGTACCAGCCACCTTAAACGACACATTG CCAAGGGGGCGTGCCCAACTCTTCTGCGTAACCAAGACCCGAATCAGGAAACCCCATATACTCCACATCAAAAGGGAGAT GTTGTGCTGAGGGGAGGTGGTGCTAGCGTTACTAGCACACCAAAGCGACGTTATAGATCCCCTAGCACTCCATACATAAT TTTTGACCAAGATCGTTGTCGTCATGAGATTGCTAAGATGGTCATTATGCATGATTACCCCCTTCACATGGTTGAGCATC CAGGATTTGTTGCATTTGTCAAAAATCTGCAGCCTCAGTTCAACATGGTGTCCTTTAATACTGTTCAAGGAGACTGTGTT GCTGCTTACCTGAATGGTAGGTCATTCCTTGTGAAGTATTTTAGGGGATTACCAGGACGTGTTTGTCTGACACTTGATGT TTGGAGCTCAAGTCAATCTGTAGGCTATGTGTTAATTACGGGACATTTTTCGGATAGTGATTGGAAGTTGCACAGGAGAG TTCTCAATGTTGTGATGGAACCATACCCTGATTCTGACACAGCTATCAGCCATGCTGTTGCTGCTTGCATTATGGACTGG AATCTGCAGGGCAGGATGTTTTCTATCACTTGTAATCAGGCACTGACTGAGGTTTCTCTTGAAAATCTCAGACCCTTGCT CTCTGTGAAGAATCCACTTATCCTCAATGGTCAGTTGCTAATTGGAAATTGCATTGCCCGTACTTTAAGCAATGTTGCAA ATGATTTGTTGAGCTTGGCACAAGATATAGTCAGTAAAATCCGGGATAGTGTGAAATATGTGAAGACTTCATATATACAT GAGGACAAATTCCTGGAACTCAAACAGCAACTTCAGGTCCCCAGTGAAAGAAGCCTTTTTATTGATGACCTAACCAAATG GAATACAACATATGAAATGCTGGTTGCAGCTTCTGAACTAAAGGAAGTGTTTTCTTGTTTGGACACGTATGATCCTGATT ACAAAGGAGCCCCATCTATTCAAGATTGGAAGCTTGTTGAGACCCTCTGCACATACTTGAAGCCCCTTTTTGATGCAGCC AACATTCTTCTCACGACAACTCATCCAGCTATTATTACCTGCTTTCATGAAGTTTGGAAAATGCAGTTGGATCTGGCTCG TGCTGCTATGAATGAGGATCCATTCATTAGCAACCTAACTAAACCTATGCAGGAAAGGATTGGTAAGTACTGGAGAGATT GTAGTCTGATTTTGGCTACTGCTGTAGTTATGGATCCTCGTTTCAAGATGAAGCTTGTTGAGTTCAGTTTCACAAAAATA TATGGCAAGGATGCCCATGTGCATGTCAAGATTGTCAATGACGGAATTCATGAGCTGTTTCACGAGTATGTTAACTATCC TCTGCCACTCACAGCAGCATATGCAGAAGGAGATGCTGGAAGCCTCATTGGGGAATCCCAAGGAGGAACTCTGACGACAG ATAATGGCCTTACTGATTTTGATGCCTATATCATGGAAACTAGTAGCCAACAGATGAAGTCTGAATTGGACCAGTATTTG GAGGAATCATTGTTGCCACGTGTTCCGGACTTTGATGTATTAGGTTGGTGGAAGATAAACAAAGTCAAGTACCCTACTCT TTCCAAGATGGCCCGGGACATATTGTCTATACCAGTTTCTACTGTTCCTTCTGAATCTTTCTTTGATAGGAAAAGCAAAG AAATGGATCAGTATCGATCTTCCTTGCGACCAGAGGCGGTGGAGGCCCTTGTATGTACCAAAGACTGGATGCAGTATATA GCAGCTGAAATGGGCATGTGA
Protein sequence (LotjaGi1g1v0695100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MATLEEGEVVVAHVTDVTISSDKMGTLEDNKLAVAPDVKSSQHIKNLSNFEAQPNKGLSASETQATGGDANELDNAEESL KHELGNSEPESNHQLGNVETPNNSQPVASEATLDKPVVSSEAQPNNQVVNSEALSNNGVANSEILTSHNGAISETQGSNE VVVSETQCSNQVVNSKALPNNGVVNSESQGSNNVAISETQGSNEVFISETRHRDEVVVLETQYSNGVIVSETQHSNEVAV SETHHSNEIIECETQHAEEVVVSETQQNNEVIVCETQHDNEMVVSETQQNNEVIVCETQHGNEVIMSDSQPSSEVVMSET QPCGDVVMSDTQLGCEVVMSDIQPVTYEARIRSDMVGSSTLHSNEVAMSDAQTIDETVMHEAQFRNDVVVSEALSEFELA DSTIDPNIQLSYSETLHDNHQFSDLDLIPEDQLPQPEPLPNSESPPRSEPLADSNHADMKPVPHNHLPEYEMLPNNHLDH SEALANYQLANNETLSHDQLASSQMMTHYELVNSEPLHSNQLITSQGHYEIVSAQTIPSYEIVNAETLLNNEEHTPDTQP NKRRKKKSIVWQHFTIETVGDGCRRAYCNECKQSFAYSTGSKVAGTSHLKRHIAKGACPTLLRNQDPNQETPYTPHQKGD VVLRGGGASVTSTPKRRYRSPSTPYIIFDQDRCRHEIAKMVIMHDYPLHMVEHPGFVAFVKNLQPQFNMVSFNTVQGDCV AAYLNGRSFLVKYFRGLPGRVCLTLDVWSSSQSVGYVLITGHFSDSDWKLHRRVLNVVMEPYPDSDTAISHAVAACIMDW NLQGRMFSITCNQALTEVSLENLRPLLSVKNPLILNGQLLIGNCIARTLSNVANDLLSLAQDIVSKIRDSVKYVKTSYIH EDKFLELKQQLQVPSERSLFIDDLTKWNTTYEMLVAASELKEVFSCLDTYDPDYKGAPSIQDWKLVETLCTYLKPLFDAA NILLTTTHPAIITCFHEVWKMQLDLARAAMNEDPFISNLTKPMQERIGKYWRDCSLILATAVVMDPRFKMKLVEFSFTKI YGKDAHVHVKIVNDGIHELFHEYVNYPLPLTAAYAEGDAGSLIGESQGGTLTTDNGLTDFDAYIMETSSQQMKSELDQYL EESLLPRVPDFDVLGWWKINKVKYPTLSKMARDILSIPVSTVPSESFFDRKSKEMDQYRSSLRPEAVEALVCTKDWMQYI AAEMGM
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 37 | 70 | 34 | - | – | |
| MobiDBLite | 41 | 70 | 30 | - | – | |
| MobiDBLite | 83 | 128 | 46 | - | – | |
| MobiDBLite | 89 | 128 | 40 | - | – | |
| MobiDBLite | 429 | 473 | 45 | - | – | |
| PANTHER | 543 | 1079 | 537 | 0.0 | – | |
| PANTHER | 543 | 1079 | 537 | 0.0 | – | |
| ProSiteProfiles | 565 | 625 | 61 | 10.509 | ||
| SMART | 565 | 621 | 57 | 2.6E-14 | ||
| SUPERFAMILY | 568 | 616 | 49 | 1.43E-6 | ||
| Pfam | 570 | 615 | 46 | 5.4E-5 | ||
| MobiDBLite | 621 | 658 | 38 | - | – | |
| SUPERFAMILY | 732 | 1198 | 467 | 6.98E-63 | ||
| Pfam | 966 | 1063 | 98 | 2.5E-29 | ||
| PANTHER | 1089 | 1201 | 113 | 0.0 | – | |
| PANTHER | 1089 | 1201 | 113 | 0.0 | – | |
| Pfam | 1115 | 1197 | 83 | 5.5E-30 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | DNA binding | Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). | ||
| Molecular function | Protein dimerization activity | The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits. |
Expression pattern of LotjaGi1g1v0695100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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