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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0695300 |
| Transcript ID | LotjaGi1g1v0695300.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein phosphatase 2c, putative; TAIR: AT3G12620.1 Protein phosphatase 2C family protein; Swiss-Prot: sp|Q9LHJ9|P2C38_ARATH Probable protein phosphatase 2C 38; TrEMBL-Plants: tr|V7D0L8|V7D0L8_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0695300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:126300715..126304092) extracted from Lotus japonicus Gifu genome v1.2.
TCAACTTCCACTCGACATTGGATTCGAGCCCTTGTGGATACATTGTGTTAAATACTTAATAGGAGAGCATTTATCACTCA TAAAAGACTAACCCCACTCGAATATGATATGATTGTATAGCGGACAAAAAAAGTTACTACACTGGAATGATCAAGTGAGC AAACCTGTGGATCATTAACTCCAGATGTAGTAAAATTCTGAAAAAAATATGGAAGGTGGAGGTGGTAGACAAGCCAAGTT ACCTAATATTGAGGATGGAACTCAAATCTCAGCCATAAAACCATGAAAAACCCACATGGCCACAAAACATCAAAATCACA AGGGACAAATGAAAGGACAAAGAATTACATTGTCAGAACTTGGTAGCTTTAAATCTCTTTTTTCATTTTCTTTCCTGATC TTAGATCTAGTGTGACAGTACCCTGAAGATCCTCTATCAAAAAGATCCAAAACCCTTCTCTTATCCACTGTTTCCTTCTC ATCACTCAAATCTTAGACCAACTCTACCATATTGAGTCCTTATGTACTTTTACAGCTAAGTCGGGTCCTAGAATATGACA CACCTTTGAGGTCCAAATGCATTAAACTCTGTTTCAAGGTACAGAGAACCAACACAGGTTCTGAATTCTCTGAACTTGCA TGAAAGCAACAGCTAGGTTGGTTTCTTATCCCAAGGTACACTCTCAGTTGGTTAAGCCCATACCAATTTGGTTTCTAGCT CTATCTTGTTTATTTCTAATAATTTCTCTGCTTCTCATAGGTATATATAGCTTCAGTAAATGAGATCATGTGAAGTGTAA GCAGGATAAAGAAAATAAACTGATCTTGTTTCATTACTGAAAACTTGATCTTTTACTACTATGGTTAGATCCTGCTGGAA AATAACTGGGGAGGGTGGTGATGATGATGTGAATGGAAGAGTTGATGGGTTGCTGTGGTATAAGGATTTGGGGAACCATC TTTATGGGGAATTCTCAATGGCTGTGATGCAAGCAAATAGTTCATTGGAGGATTGTAGCCAACTTGAATCTGGACCCTTG AGTTTTGACAATTTGGGTCCTCAAGGAACCTTTATAGGTGTTTATGATGGTCATGGTGGAACCTCAGCCTCTCAGTATGT CAGTGACAATCTTTTCCACAACTTCAAGAGTATGCTCTCAACTTTATTCTCAGCACATATACAAATGTTATTGGAAATGT AATTTTGCTCTGTACTTCTTTCAAATGTAATTAATTCGTGCATGTTTGGAAACACTTCTACCATTGATTCTGAAGACAGA ATCAAATCAATTCTAGGCAGAAGTTTTCGTGAGTAGCTTTTAAGTGGGAGAATTGATAATGAGGAAATAGAATTTGATTC ATGACAAAACTATTCAAATTTTGGTATCCTTAAAATCATTCATTTCCCAAAAAATCGTAGGAACCATAAAATAGGAGTTG TTTACAAAATTTCAACTTCATAACTAGGACAAATTTGTACTCTTATGTATTTCTAGCATCTTTGGACCAGCTTCTCTTTT ATCGGAATCAATTTTGAAATGCAGAAGCTATTCAAAGAAGCTTCTCCTCATAATTGATTTTGTCTTCAGAAGGAATTGTA TAAGGGTTTATGAACATGCACTTCATTGTGGTGGTACATACTGAATACTGAATCATTTTTCTCTGTATGAACCAGGTATT GCAGCTGAACACCAAGGCATTTCAGAAAAGGTTATCAGAAGGGCCTTTCAGGAAACAGATGAGGGGTTTCTCTCACTTGT CAAGAAGCAGTGGCTAAGCGAGCCACAGATTGCATCCACTGGTTCATGTTGTTTAGCAGGAATAATTTGCAATGGCATGC TATATGTTGCAAATGCAGGAGACTCAAGGGTGGTGTTAGGAAGATTGGAGAGGGCAACAAGGGAAACATTAGCTTTCCAA TTATCTGAAGAACACAATGTTAACATAGAAACTGAGAGAGATGAAGTTCGGTCAAAGCACCCCTATGATTCACAAATTGT GGCCATGAAACACAATGTTTGGCGTGTGAAAGGTCTCATACAGGTAGAAACTTGAGTTATTCATATTGTTTTTTGTTACT AATGCAGATTTTAGATTCTAGAGCCAAACCCTTTTGAAGGAAACAAAGGAAAGACTCATATCTAGAGCAAAAACAAATTG TTTATGTGCATGATTGAAAACTCGTTTGAAATCCACAGTGAAGCCAAATTCTTAGTGGACAGAAGCAAAAAGTAAGAGAA GTTGCTTTTGTGCTCCATGAGTTTTACTTCTGTGGTTTTCAAATGAGTTTTCAATATTGATTCTGAAGCTAGTATCAATT CCGGAGATAATCATATGTGAGTAGCTTCTCAATTGATTATGGCGAAAGAGAAGCTTATCCAAAATTATGATTGTTATTGC ACAATTGGTTTTGCTTGACATTGTTGAGAAGGCCATAAGTAACAACAACAAACACATTGAATTGCTAACAACCTAAAAGT CACATGTTCAATTCCTTGTAGATAACCTAGAACCTTTAATTACTCTCCAATTAAATGTTAGCACAAACTTGCCTTTGCAG GTTTCAAGATCCATAGGTGATGCATATCTGAAGAATGCAGAATTCAACAAGGAGCCTCTACCACAAAAGTTTAGACTACC TGAAACTTTCTTCAAGCCAATTCTTAGTTGGGAGCCATCAATAATAACGCATAAACTCCACTCTAATGATCAATTTCTCA TATTTGCTTCTGACGGCTTATGGGAGCAACTTAGCAACCAAGAGGCTGTCAATATAGTCAGCAACAACCCTCGAAACGTA AGTTCCATTTGATCAATTAAAGTATGTTCTCTTATTCAAGTGTCATTTTTTCTGACTTTGTGGTTCATCATGTAACAGGG AATTGCTAGGCGGCTCGTGAAAGCTGCGCTAAGAGAAGCAGCTAAGAAGAGAGAAATGAGAGTCTCAGACCTCCAGAAGA TTGAACAAGGAGTGAGGAGACACTTCCATGATGACATTACAGTAATTGTTGTATTTCTGAATCCCAAACTGATAGATAAT AACTCTCTCTGGGGTTCTCCACTTTCTATCAGAGGAGGTGGACCAGCCAATTCTTAGTGCAAAGAAATATAGGCTTCCAA TTATTCTTGTATAAAGCAGATAAGTAGATATTCTCATGGAAAGAGTAACTCTTTTCAACATTTATCAAGGGAGACCCAAA AAAACTGTACAACGTTTATAATGAATTGATGATAGCTGAATTTAAGAAAATAGTAACTATTAAGAGATGAAAGTTATGAT TTGTTAAATGAGAACATGTATTTTTTGTGTAATCTTTACTTATCTTTCCGACATAAGAATCTACAACCTCAGGTCCAAGT TCAGTGGATAAAAACTCA
CDS sequence (LotjaGi1g1v0695300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTTAGATCCTGCTGGAAAATAACTGGGGAGGGTGGTGATGATGATGTGAATGGAAGAGTTGATGGGTTGCTGTGGTA TAAGGATTTGGGGAACCATCTTTATGGGGAATTCTCAATGGCTGTGATGCAAGCAAATAGTTCATTGGAGGATTGTAGCC AACTTGAATCTGGACCCTTGAGTTTTGACAATTTGGGTCCTCAAGGAACCTTTATAGGTGTTTATGATGGTCATGGTGGA ACCTCAGCCTCTCAGTATGTCAGTGACAATCTTTTCCACAACTTCAAGAGTATTGCAGCTGAACACCAAGGCATTTCAGA AAAGGTTATCAGAAGGGCCTTTCAGGAAACAGATGAGGGGTTTCTCTCACTTGTCAAGAAGCAGTGGCTAAGCGAGCCAC AGATTGCATCCACTGGTTCATGTTGTTTAGCAGGAATAATTTGCAATGGCATGCTATATGTTGCAAATGCAGGAGACTCA AGGGTGGTGTTAGGAAGATTGGAGAGGGCAACAAGGGAAACATTAGCTTTCCAATTATCTGAAGAACACAATGTTAACAT AGAAACTGAGAGAGATGAAGTTCGGTCAAAGCACCCCTATGATTCACAAATTGTGGCCATGAAACACAATGTTTGGCGTG TGAAAGGTCTCATACAGGTTTCAAGATCCATAGGTGATGCATATCTGAAGAATGCAGAATTCAACAAGGAGCCTCTACCA CAAAAGTTTAGACTACCTGAAACTTTCTTCAAGCCAATTCTTAGTTGGGAGCCATCAATAATAACGCATAAACTCCACTC TAATGATCAATTTCTCATATTTGCTTCTGACGGCTTATGGGAGCAACTTAGCAACCAAGAGGCTGTCAATATAGTCAGCA ACAACCCTCGAAACGGAATTGCTAGGCGGCTCGTGAAAGCTGCGCTAAGAGAAGCAGCTAAGAAGAGAGAAATGAGAGTC TCAGACCTCCAGAAGATTGAACAAGGAGTGAGGAGACACTTCCATGATGACATTACAGTAATTGTTGTATTTCTGAATCC CAAACTGATAGATAATAACTCTCTCTGGGGTTCTCCACTTTCTATCAGAGGAGGTGGACCAGCCAATTCTTAG
Protein sequence (LotjaGi1g1v0695300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVRSCWKITGEGGDDDVNGRVDGLLWYKDLGNHLYGEFSMAVMQANSSLEDCSQLESGPLSFDNLGPQGTFIGVYDGHGG TSASQYVSDNLFHNFKSIAAEHQGISEKVIRRAFQETDEGFLSLVKKQWLSEPQIASTGSCCLAGIICNGMLYVANAGDS RVVLGRLERATRETLAFQLSEEHNVNIETERDEVRSKHPYDSQIVAMKHNVWRVKGLIQVSRSIGDAYLKNAEFNKEPLP QKFRLPETFFKPILSWEPSIITHKLHSNDQFLIFASDGLWEQLSNQEAVNIVSNNPRNGIARRLVKAALREAAKKREMRV SDLQKIEQGVRRHFHDDITVIVVFLNPKLIDNNSLWGSPLSIRGGGPANS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 10 | 366 | 357 | 7.8E-180 | – | |
| PANTHER | 10 | 366 | 357 | 7.8E-180 | ||
| Gene3D | 28 | 354 | 327 | 6.5E-83 | ||
| SMART | 31 | 343 | 313 | 1.4E-67 | ||
| ProSiteProfiles | 34 | 345 | 312 | 44.444 | ||
| CDD | 35 | 345 | 311 | 1.1145E-68 | ||
| SUPERFAMILY | 46 | 346 | 301 | 1.44E-60 | ||
| Pfam | 67 | 314 | 248 | 2.0E-39 | ||
| ProSitePatterns | 71 | 79 | 9 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. | ||
| Molecular function | Protein serine/threonine phosphatase activity | Catalysis of the reaction: protein serine phosphate + H2O = protein serine + phosphate, and protein threonine phosphate + H2O = protein threonine + phosphate. | ||
| Biological process | Protein dephosphorylation | The process of removing one or more phosphoric residues from a protein. | ||
| Molecular function | Cation binding | Interacting selectively and non-covalently with cations, charged atoms or groups of atoms with a net positive charge. |
Expression pattern of LotjaGi1g1v0695300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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