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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0696800 |
| Transcript ID | LotjaGi1g1v0696800.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Exocyst complex component, putative; TAIR: AT3G09520.1 exocyst subunit exo70 family protein H4; Swiss-Prot: sp|Q9LZD3|E70A1_ARATH Exocyst complex component EXO70A1; TrEMBL-Plants: tr|I1NA18|I1NA18_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0696800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:126451760..126454175) extracted from Lotus japonicus Gifu genome v1.2.
CATTTATCTAATTTCTCCTTTCCCATAACAGAAAGTTTGTTACAACACCAAAAGGGGAAGTAACTAAACATGAAGAAGCT CTTCTTTAAGCCCAAAACCCCATCGTTTTCATTTGTCCACCATCATCCTCCATCTATGCCTGGAACCCCACGGAGGTCGA ACCTCCCCGATCCCAGAAATGTCGAAGAAGAGAGATGTATCGCAGAAGCAGAGGCACTGATCCTGAAATGGGACTCGGAA ACCTCTGCTTATGCCAAAGTGACATCTCTCTTCTTCGAGGATAAAACCGAAGCAAAACACTACACCAACAGTGTTATCCT GCTTCAGAAAGCCATGCATTCATTGCTCTCTAACAACCCTTCCTCCGAGAAGCTAATCCTCGCTCAACGCCTCATGCAGA TGGCAATGAAGCGACTCAGGAAAGAGTTCTACCAGATTCTATCCATGAACCGGGCTTACCTCGACCCCGAATCGGTCTCC GTTAGATCCTCCCGGACCTCCATCCACTCTAGCACCTCCGACTACGACGAGGAAGAAGACGAAATCCGCGCTGCTGGAGA CTCAATCTCTGAGGTGGAGCTGGTTTCCTCCGTCGCCATGGATGATCTTAGAACCATCGCTGACTGCATGATCTCCTGCG GCTACGCTAGAGAATGCGTCACCGTTTACAATTCCATCAGAAAATCCATCGTTGACGAAGGCATTTACCGCCTCAGCGTG GAGAAGCTCAGCCACGCGCGGTTGAACAAGATGGATTGGGAGGTTCTAGATTTGAAGATCAAGAGTTGGTTAGAAGCAAT GAGGATTTCCGTTAGAACACTCTTCAACGGAGAGAGAATTCTCTGTGACCACGTCTTCAGTTCCTCAGACTCCATCAGAG AATCATGCTTCGCTGAAATTTCCAGGGACGGTGCCACTCTTATCTTCGGATTCCCGGAACTAGTTGCAAAGGCAAAGAAA TCACCGCCGGAGAAATTGTTCAGCGTGCTCGACATGTACGCCGTAACAACCGCTCTGTGGCCGGAGATTGAATCAATCTT CTCCTCAGATGCTACCTCCGCCGTTAGATCTCTAGTCCTCACCTCACTTCAACGGCTGGCCGAGTGTGTTCAGATAATGC TCGCGGAGTTTGAAACCACGATCCAGAAGGAAGCTTCTAGATTACCGATGAACGGCGGTGGAGTTCACGCGCTCACGATC CAAACGATGAATTACCTCTCAACTCTCGGCGATTACGGCGGCGTGCTCCCTGACATATTCTCCCGCGCGGATTTGCCACC GTCGTCGGCGGGGCTACCGGAATCTTACTTGTACAGTCCGGAATCCGACGACTCGACGGCGCCGGCGCTCACAGCGCGCG TGGCGTGGCTGATCCTCGTTCTCCTTTGCAAACTCGATAGCAAGACGAAGCAATTGAAGGACATTTCACTTGCTTACCTG TTTCTGGCAAACAATCTCCGGCATGTCGTCACCAGAGTCCGCACCTCGAATCTGCAGTACGTGCTCGGCGACGATTGGGT CGCGAGGCACGAAGATAAGGTGAAGCGATTCGTTGCGAACTACGAGAAAATGGCGTGGCGGGAAGTGTTTGCGTCGTTGC CGGAAAATCCGACTGCGGCGGAGGCGAGGGCGGTGTTCGAGAATTTCAATCACCGTTTCGAGGAGGCGTATCGGAAACAG AACTCGTTTGTGGTGGCTGACAGGGAGTTGCGAGATGAGATAAAGGGATCGATCGCGAGAAAGATAGTGCCGAGATATCG CGAGTGGTATAATGCGGTGGTTGGCACGGTGGGATCGGTGAGGGAAATGGCGGAGATGGATTTTGTCACTTTTACCCCTT TGGATGTTGATAATTACTTGGCTAACCTTTTCTTTTTTAGAAAAAGCAACAGTGGTGTATCGTCGCCGGCGTCGTCTGTG ACTTCGTCTTCTCACCAGCGGCGGATTTTGGTTCACAATTTCTAAGACGACTGATTCCGCCGTTATTTATTCCTGACCTA AGGTCAAAGAAAAAGGATAAAAGAAAGTTTTGAACATGTGCCAGAAGACATAAGATAACGACTTTTTTTGTGAACTGTAT TTCTCTGATGCTGATATAGGTTTGAATTTTTTGCATCAAGGTTAATTGTATTTATACATGTAAAATAATACTGTCCAACC CAATTCATCCCCTTGATAGAAAAAAATATATATGTGAAGAATAAAATGGGGGAATTGTAATTGAAGAAAAATATGTGTGG ATACATCAAAATTGTTTACACATGCAAGACTTTTAGCATGATTAATTGATATGTTGTACTCATATTAATATCTTTCATCT AATTATTCACTCTCTTTATTTATGTTTCTCTTAATTTTTATCACAACACAGTCAACACCTATCATATCCCTAATTCTCTC TTTTTTTTCTTCTTTT
CDS sequence (LotjaGi1g1v0696800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAGAAGCTCTTCTTTAAGCCCAAAACCCCATCGTTTTCATTTGTCCACCATCATCCTCCATCTATGCCTGGAACCCC ACGGAGGTCGAACCTCCCCGATCCCAGAAATGTCGAAGAAGAGAGATGTATCGCAGAAGCAGAGGCACTGATCCTGAAAT GGGACTCGGAAACCTCTGCTTATGCCAAAGTGACATCTCTCTTCTTCGAGGATAAAACCGAAGCAAAACACTACACCAAC AGTGTTATCCTGCTTCAGAAAGCCATGCATTCATTGCTCTCTAACAACCCTTCCTCCGAGAAGCTAATCCTCGCTCAACG CCTCATGCAGATGGCAATGAAGCGACTCAGGAAAGAGTTCTACCAGATTCTATCCATGAACCGGGCTTACCTCGACCCCG AATCGGTCTCCGTTAGATCCTCCCGGACCTCCATCCACTCTAGCACCTCCGACTACGACGAGGAAGAAGACGAAATCCGC GCTGCTGGAGACTCAATCTCTGAGGTGGAGCTGGTTTCCTCCGTCGCCATGGATGATCTTAGAACCATCGCTGACTGCAT GATCTCCTGCGGCTACGCTAGAGAATGCGTCACCGTTTACAATTCCATCAGAAAATCCATCGTTGACGAAGGCATTTACC GCCTCAGCGTGGAGAAGCTCAGCCACGCGCGGTTGAACAAGATGGATTGGGAGGTTCTAGATTTGAAGATCAAGAGTTGG TTAGAAGCAATGAGGATTTCCGTTAGAACACTCTTCAACGGAGAGAGAATTCTCTGTGACCACGTCTTCAGTTCCTCAGA CTCCATCAGAGAATCATGCTTCGCTGAAATTTCCAGGGACGGTGCCACTCTTATCTTCGGATTCCCGGAACTAGTTGCAA AGGCAAAGAAATCACCGCCGGAGAAATTGTTCAGCGTGCTCGACATGTACGCCGTAACAACCGCTCTGTGGCCGGAGATT GAATCAATCTTCTCCTCAGATGCTACCTCCGCCGTTAGATCTCTAGTCCTCACCTCACTTCAACGGCTGGCCGAGTGTGT TCAGATAATGCTCGCGGAGTTTGAAACCACGATCCAGAAGGAAGCTTCTAGATTACCGATGAACGGCGGTGGAGTTCACG CGCTCACGATCCAAACGATGAATTACCTCTCAACTCTCGGCGATTACGGCGGCGTGCTCCCTGACATATTCTCCCGCGCG GATTTGCCACCGTCGTCGGCGGGGCTACCGGAATCTTACTTGTACAGTCCGGAATCCGACGACTCGACGGCGCCGGCGCT CACAGCGCGCGTGGCGTGGCTGATCCTCGTTCTCCTTTGCAAACTCGATAGCAAGACGAAGCAATTGAAGGACATTTCAC TTGCTTACCTGTTTCTGGCAAACAATCTCCGGCATGTCGTCACCAGAGTCCGCACCTCGAATCTGCAGTACGTGCTCGGC GACGATTGGGTCGCGAGGCACGAAGATAAGGTGAAGCGATTCGTTGCGAACTACGAGAAAATGGCGTGGCGGGAAGTGTT TGCGTCGTTGCCGGAAAATCCGACTGCGGCGGAGGCGAGGGCGGTGTTCGAGAATTTCAATCACCGTTTCGAGGAGGCGT ATCGGAAACAGAACTCGTTTGTGGTGGCTGACAGGGAGTTGCGAGATGAGATAAAGGGATCGATCGCGAGAAAGATAGTG CCGAGATATCGCGAGTGGTATAATGCGGTGGTTGGCACGGTGGGATCGGTGAGGGAAATGGCGGAGATGGATTTTGTCAC TTTTACCCCTTTGGATGTTGATAATTACTTGGCTAACCTTTTCTTTTTTAGAAAAAGCAACAGTGGTGTATCGTCGCCGG CGTCGTCTGTGACTTCGTCTTCTCACCAGCGGCGGATTTTGGTTCACAATTTCTAA
Protein sequence (LotjaGi1g1v0696800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKKLFFKPKTPSFSFVHHHPPSMPGTPRRSNLPDPRNVEEERCIAEAEALILKWDSETSAYAKVTSLFFEDKTEAKHYTN SVILLQKAMHSLLSNNPSSEKLILAQRLMQMAMKRLRKEFYQILSMNRAYLDPESVSVRSSRTSIHSSTSDYDEEEDEIR AAGDSISEVELVSSVAMDDLRTIADCMISCGYARECVTVYNSIRKSIVDEGIYRLSVEKLSHARLNKMDWEVLDLKIKSW LEAMRISVRTLFNGERILCDHVFSSSDSIRESCFAEISRDGATLIFGFPELVAKAKKSPPEKLFSVLDMYAVTTALWPEI ESIFSSDATSAVRSLVLTSLQRLAECVQIMLAEFETTIQKEASRLPMNGGGVHALTIQTMNYLSTLGDYGGVLPDIFSRA DLPPSSAGLPESYLYSPESDDSTAPALTARVAWLILVLLCKLDSKTKQLKDISLAYLFLANNLRHVVTRVRTSNLQYVLG DDWVARHEDKVKRFVANYEKMAWREVFASLPENPTAAEARAVFENFNHRFEEAYRKQNSFVVADRELRDEIKGSIARKIV PRYREWYNAVVGTVGSVREMAEMDFVTFTPLDVDNYLANLFFFRKSNSGVSSPASSVTSSSHQRRILVHNF
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 613 | 613 | 0.0 | – | |
| PANTHER | 1 | 613 | 613 | 0.0 | ||
| MobiDBLite | 15 | 35 | 21 | - | – | |
| SUPERFAMILY | 45 | 601 | 557 | 1.05E-125 | ||
| Gene3D | 64 | 608 | 545 | 2.1E-147 | – | |
| Pfam | 238 | 598 | 361 | 1.3E-93 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Exocyst | A protein complex peripherally associated with the plasma membrane that determines where vesicles dock and fuse. At least eight complex components are conserved between yeast and mammals. | ||
| Biological process | Exocytosis | A process of secretion by a cell that results in the release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle. Exocytosis can occur either by full fusion, when the vesicle collapses into the plasma membrane, or by a kiss-and-run mechanism that involves the formation of a transient contact, a pore, between a granule (for exemple of chromaffin cells) and the plasma membrane. The latter process most of the time leads to only partial secretion of the granule content. Exocytosis begins with steps that prepare vesicles for fusion with the membrane (tethering and docking) and ends when molecules are secreted from the cell. |
Expression pattern of LotjaGi1g1v0696800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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