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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0703700 |
| Transcript ID | LotjaGi1g1v0703700.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Auxin-responsive protein; TAIR: AT4G28640.1 indole-3-acetic acid inducible 11; Swiss-Prot: sp|Q38829|IAA11_ARATH Auxin-responsive protein IAA11; TrEMBL-Plants: tr|I3S1W8|I3S1W8_LOTJA Auxin-induced protein; Found in the gene: LotjaGi1g1v0703700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:127191009..127198940) extracted from Lotus japonicus Gifu genome v1.2.
ATGTGAACAAATGTTTCTCTAAACGCAACGCGATCACTTGATTGAATCCGGACTAAATGGTTAAGTAGCTGAGCTATATT CAAAGTGTTCAATGTTGGTATACTAAACTCTTGTTGATCACGCCATCCATGACTGATTCAATATGTATCAAACCAAGGTG TAACTGTCACCTTCTTCAATCTTCATCCAATCCAATCCCATCCCCTGAATCAAATTCAAACCTCTCTCTCTTACCTAACC CATCACTCTTCTTCTTCTTCTTGTTTCCATTATTATAGCTTCAAAATCATTTATTTGTTGAAGGCCATGCAGGGTAGTGA TGAAAACATGGTCCTTTCCTCAGAGGATTCTTCATCCCCAGATGAGACTGAGTGTCACCTTCAATTGGGTCTCTCCTTGT CCCTCTCTCCCTATGCCACTTCTTCTTTAAGCAGCAGAAGCAGGACTAGTTCTCATTCTCATTCTGTTCTCACCAATAAC GCTCCCACCAGGTACTAAATCATCTTATACACCCTTAATCTCCATCTTCATGCTTCTCATTGCTTTCAACTTCAACTTTG AGTCAGTTGTAGTAATCTTTGAATCGATTCAGAAATTGGTTGATGGCGCTTCATTGGTGTTTAAGTATACTTGAATCATA ATATCTACATACACACACATGTACATATACAAGGTGATTCCAACAATTGAATCATGTGATACAAACCTTATCCTCATGTA CCATAAATTTGAGATCAAATCAACATTCATATTGAAGTTGTGGGGTAGTTTTCTTACATTAAAATTTTGTTTACTTTTCC AAAAAACTGGTTTGTGTGTGTAAGACTCTTCGTTTCGTTTTGTGATGTTTCTAGTTGTAATTTTTCTCAATGATGGCCAT GGTGAATTACCCTCTATAGAAACATAATTCATAAACTACTTCTCAATTTTACTACAATTTCCTTGCTAATGGGATAGTCA TTTATGCTATGACCTTTTTGCTTTCAGTCAAGTAGTTGGATGGCCCCCTCTCAGAGCATATAGGATGAACAGCTATAATA GCCATGCAAAATCCCAAGTCACTGAAGTATTCAATTCTATGGTTGAGAACAGTAAGGCCAATATTGCTGTGGTAAGGAAG AGTTCTGACAATGGCAGTGTTGATAATAGTATCATTGGCAAAGAAAACAGAAACCCCAGGACCAGGAGTTCCCTGTTTGT GAAAGTAAAAATGGATGGGGTACCAATTGGAAGGAAGGTTGATTTAAGTGCTCATAGTTCTTATGAAACCTTAGCTCAAA GCTTGGAGGATATGTTTAATGAACCAAATACAGTTCTCACTTGCAAAGGTGAGTTTTCTTTGTTTATACTCCTAATAAAG AAGTTGCAACTCCTGCATGAGATTACATCATGTTTTAATGAACATTGAGATTTATATGCCAGGGGAATATCTTGTTAACC TTTGGCATTTCATTTCTTGTGTCCACTAAATATGACACCGTGATAATTTCTTGGTTACTCTCTTTCTAACTTTGCTGAAT CGAAGCATACAAGTGATTGACTATTGTTCAAACACACATTTGCAGATTAAAAAAAGATAAAAAAGTGAAAAGTATGCGTG GATTACTATGTTTAAGTGGTAATGGAAGGGTTTACAAAATAGATATCCTATGTGCTGCTTTTATTTGAACTCTATCTCAT CATATCAGTTTTGTAACATTTAAGCTATCGAACTAGAGAAAATTTCAGTTCTGCAAAAAAAAAAACCACCTAACAACATG ATGTTATGTTTTCATCAAAAAAATTCTGACATGTTATTCTTTCTATCTGTCACTTTTGAGTTTTGCTTTTGGGATAGATG ATAGCTTAGCGCTTATTTGTCTTTTCACTGTTTACGGTTCCTTTTTCCCTAATGTCCTGCCATCATCGTCAGTTGGACTA AATGGAGTGAATCATGGTATTATAGCTGGAGCAGATAGGCACTCAAAATTGTTTGATGGATCTTCCAACTTTGTGCTTAC TTATGAAGACAAGGAAGGAGACTGGATGCTTGTTGGAGATGTTCCTTGGTGGTATGTATTCGGTTCATGATGATCCTTGA GTTCTTCTCTCTCAAGTTTTTTTTTTTATAGGCAATGTTAGTTGTTAGTAATGTTAGTAAATTAGTCTTTCCTCAGGGTT CGAACCCTGGACCCTTCACCCTTTATCCCGCCCAACCCTTATGTCTTCTAGCTCTTACCACTTGAGCTAACCCTTCACCC TTCTCTCTCAAGTGATATCATTGACGCGCATTTTTTTTCCTATCTAGCTAAAATTTGCTTTGTCAGTTATTTTTCGAATA GTATGCTATTTAGTTTGGTCTGGCTTCAAATAGTATGTTTATTTTTATTAGTGCGTAATCCGGATATCTTTTATTAGAGC TTACCTTTCCCTGAAAAAAGAGAATAAAATGAGCAATTGTAAATTTGTAACTAGTTGCAATTGATGAATACATGATTCAT GTATATTCATGCTTCATTTTTCTTCTTGCATTGTTGATGTAGAACTTCTTGTTCAATTTGATTTAATATTTATCTACTTT TGTCCTTAAATTGGCTATCAGGATGTTCATTAGCTCTGTTAGGAGGCTAAGAATCATGAGGACATCTGAGGCTAATGGAC TTGGTAAGTAGAAGCCTTATTATTCACAACACAGATTATTTCCTCGTTTTTCTTTCTCTGACTTAGCTACTAATTTGCAC CACCAGATTGGAAGAACAGAACAGCAGATTGAAAAGCAAGCTCATATAGATAAGGTTTGCAATTTTGCATGTGTTAAGAT ACAGAAATGTATAGCACAAAAAGAAGGAATAAGTATGGGAGAAATAACTGAGACAGTAAATATGAGATGCTTGTTACCTT ATCAAATTTAGATTACTTTCCCTTTTACTGCAGTTTTCATTTGAATTTTCAAGCTATTTTCCCTGTTTATTAGAATCAGT GTCTTACTCTTAAGTTTGCCAAAACTCTTGAAAATAGTATGTGAGACGAATAGTAAGGATGCACACACATACGGCATACC ACCCTCTGGTTAGCACTTGAGATATTGGTATATTGGACTGGCATGATGGATTGGCAATAAACACGAACATGGACAAGAAC TATTAAGGACTTAGTGTCACTTCAGATACCAGTTAAGTGCAAGGTGAACGAACATTTATCTAAATTCATGAAAAGAGTTA CGTTCATTTTTTGTCTTAAAATGCATGCTATCAACAGTTTGCTCTGGCATCAATGGATTTTCTTATTAAAGGACATTGTC CATAGGTTCACGAGCTGTCTATTTTATTTTTCTTTTAACATAGTTAAAATATATATTAAGGTTTCTTCTACATCAATATT TTTTTGTCAAGAACATCAAGTCTACAAGCACAAGCAATGTTGTGGGATTTTAGGAAGAATGGTTGCCTGGAATTGCAGTG GCGCCCATTTTTTATGTAAATAAGATTTCGACTAACAGGCAATGCAGTTCTATTTTAATTCATTTATAGCTATTAGTTTA GCACTATTAAGAGCCTAGAGCTTCATGCATATGAATAAATTACTCTTGGCTTTCTTGGGATTGTGATAATGAATAACTGA ACTGGAGAACCGTGCCTTTGTTTAATAGACTGATTAATAGAACTTTGAAAAGGAAGTTTCTCAGATGTTTTTTTTAAGAA CAAAACTGGGACCAATCTACTTTTGATTACTTCATTACTACGTCTAGAATCATTATTAATAGGTACAATTGCTTCATCTT GGTTTATATAGAAATTTATGGTTCTGTACCAAAATCAGAAGAATACATAGAAAATTTATTTGCAAAAAATGAATATCATT TTTTGATACAAGCATTAACATATTAAAGACAAATATGCACTGGTGTTTCAAAATTACAGCTCTAATAGCATGTTTGGATC AAATTCTCTCTTCTCAGAATCAATTATGAAAACCAAAAGCTTCTCACAGAAGCTTCTCCTAGAATTGATTCCAGCTATAG AATCAACTGTTGAAGGATTTCCAAACATGCACTGGCGATTTACAGAAGGCCATTAACCGGCGATGTGCTAAAAACTGACA TCTGGTTATTGTTAGCTGCTACTGTTTCATTGTTGCTACTGCTCTTTCTCCTAGGCTTTGCCTCTTCAAGCATCATTATG ACATCCCTCATGGTTGGTCTGTCCTTGGGGAACTTAGCAGTGCAGAGAATTGCTATTCTTAGAACTAAAACCATCTCATC TAGAACATAGTTGCTGTTTCCTACACTGGGGTCTAATGCTTCTTCTAGAGATTTGTTGTGTCTAATCTTCCTTCTAATCC ACTCTACTATGTCTACAGACTCTCCAAACTCCGGATCTAAAGGCCGTTTTCCGGTGAGAAGCTCCAACAAAACTACTCCA TAACTGTAAACATCAATCTTTTCATCCACCTTCAAGGCATATCCATATTCTGCCAAAGAATAAATCATTGAAATGTCAAC TAGTATGAATATTAATCTAGTACATATAACAAAGAGCAAACATCTTTCCATTAACATGTTTTCTAAAATTGATTCTGAGA GAAAATAAGCGGATCCAAACATTCTATATGTTATCTGTCTATTATAAATTTATAATACCCTAATTAGAAGTTATATTCTT CATATTTAATTGTCCTTCTTTCTCTTAAATGGTCTGTAAGCAAAAGTAGCATAAAGTAAGATTTTTGAACTAGTTACTCA CCAGGGGCAATGTAGCCATAGGATCCAGCAACCATGGAGACTGTTTCATTCTTCCTGATGATCATCTTGGCTAAGCCAAA ATCTGCTATCCTTGCCTCAAGATCTGCATCGAGCAATATATTGTTTGACTTGATATCTCTATGGATAACGGGTGGATGAC AATCATGATGAAGATAAGCAAGTCCTTGTGCCACTCCTAGAGCTATGTTATACCGCGAAACCCAGTCTACAAGCAATCTT GTTGCCTGTCTACCATGTAAGGCGTCTCCGAGGTTTCCATTGTGCATGAATTCATAAACTATCATCAGATCAGCGTCATT ATAAAGAAATCCTAACAGTCTAACAATGTTCCTATGCCTTAGCCTCCCTAAAACGTTCACCTCTCCCACAAGGTCATCAC TGCTTCCTGCTTCAACATCTGTTCCTGATCTCCACAGTTTTTTCACCGCCACAACTGTACTTGAATGCGGTACCTCAGCC TTGTAAACAACCCCGGTACCTCCCATGCCAATCACATTGGTTTCTTTAATGCAAGCTAGAATGTCAGTGCTTGTAAAACC AAGCCTCTGAAATGCCATCAATCTCCAGGGCCACCCTTTGCTACTACCCTTGTAAAATCTTTCATTGAAGCAAAATCCAT CATTGTACCATCTTGTGTATAAAGATCTTGCTACCAAAATTGTGATTCCGAGGGCTAGGATTGATGATATTCCAATGATC CATCCTGTAATAATGTGCTTTGCATGTAAGCTTCCATGCCTTGATGAGTATGCAGAGTTCTGATCACATGGAAGGAGTAC ACCACCACATAAGCCTGCATTTCCGACAAGATTATTCGGGCTTATCGTTCTTAGCATACCGTTTATCGGGACAGAACCTT CGAGCTTGTTGTATGAAATATTGAGTGTCTCCAGAGCTGGAGAAACACCAAAGCTTTCAGGTATATGACCGGTAAGAGAA TTGTTGGAAAGATCAAGCATGGCTAATGAAGGCATGTTAGCTAATGCATTTGGGATTTCTCCAACTAATCGGTTATTTTG TAGGTTCAAATTCACCAATTTCTCACATGAAGCGATGCTTGCCGGAATGTTTCCGGATAAATGATTTGAGGAGAGATCAA GAACAGTGAGTGAGGGACAGTCCTGAAACTGGTCTGGGATTTCACCTTCCAAGTTGTTATTGGAGACCATGAAAGCTTGC AGGTTTGGAATGGAAAAAATGGTGGAAGGAAGAGAAGAGTGGAGCTTGTTTCTTGAGAGATCAATGAAAGAAAGGGTTGT GGAAAAAGCAAGGTCATCTGGAATTCCACCAGAGAGACTATTGTTAGCCAATTCTAACCTTTGAAGCTTCCCAAGCTTGC CAAAACCCACAGGAACTGTCCCAGAAAGAAAATTGTTCTGCATTCGGACTCGAACTAGTGAAGGACACATTGAAAGGTTT GAAGGAATTGAACCAGAGAAGGCATTGTTGAAAAGTATAAGCTTGGTGAGATTACCTATGCTGCAAAGATTCTCTGGAAT CTCTCCAGAGAATGAATTGGATGATAAATCCAACCATTGCAATGGTGAATTCTTGCCAAGGTTACTAGGAAGCGGCCCAG ACAAGGAATTATTCCATAGCTCAAGCACCTCCAATTGAGGCAAGTCCTCAAGGCCAGAAGGAACGAAACCAGATAGCTTG TTTCCCATGAAGTTAAGAAGCTTTAAATTCTTCAACTGACTTATTTCAGCTGGAATTTTTCCTGACAACATGTTATCAGA AAGATCCAGAAACTGCAAAGAAGTCATGTTGCCAATTGCTGGTGGAATTCTCCCTTCAAAATTGTTGTTGTATAAGAAAA ATGTATCCAATAACTTGAGCTTTCCTAATGCAGCTGGAACCTCACCACCAAGATTGGATACTGCTAAATCAACATACTTA AGACTGGTGAGATTTCCAAAATCTTCTGGAATCCCACCTTCAAATTCATTATATCCAAGGATCATATACTCCAGTGATGA AAGTTGTCCCAGCTCTCCAGGAATTTTCCCAGTGAGATTATTCCCAGATAGACCAAGGAACTTCAACTTGTGCAAGTTAC TGAATGATTTTGGAACTGACCCTTGGAAGAAGCTACCTCTGAGATCCAGCATCTCTAAGGAAGAAGCATTTCCCAGGTCC TCCGGAAGAGGACCCGTGAACTCATTGCTGGATGCGTTAAAGGTTGTAAGTCTCCACGCCCTTCCGAGGCCTAATGGAAA GTCACCAATGAAGGAATTCTGGCTCACATCAAGACTGTTCAGTGTGGTGAGATTGGCTATGGATTTTGGCAATGTTGATG AGAAAGCATTGCAACACAAGTTGAGAGAAGTAAGACTTTTAAGTCTTGTTAAATCATCGGATACTCTGCCGCTTAGATTC TTGTGGGAGAGATCAAGCTTCTCTACTGCTCCAGCTGAGTTGCATGTGACTCCATTCCAGTTACAATGAGCTGCATCATT TCCTAGTGCTTTGTCGACCAATTTCCAATCTTGCAGTGTGTTCAATGGATCAACAAGGCCTGCTTTTATTGAAAGCAAAG CTGATAATTCATCATTTGCAGCAGCAAAACTGTAAGAGAAACAACCAATGTAACAGAAGAAGAAGATGAAAAAATGGGTT TTCATTGGCATCATGTTCTTCTCCATTCTGCTTGGTTAATAGCTTAGTCGTCCATCATTGACACACTCTATTGAAACTGA GGGAGAAGATTATGGGGATGGACATGATCTGCCTAGTTTGTGAGAAAGTGTTTGAAAGAAGAACCACAAATGTATGTGAT TCCTGATATGATATGAAAATGACCAATAAATAAACTAGTTGATTAGTTTTGGTCAATTTTAAGAACTAGTCAGGTTTATG AGCTGGTATTTGAAAGCAGCTAGTAGTGTGCAAGTAATGACAGATGAAGCTTTGGACTTATTTGAAGTTTATCCAACATG AAACATGGGAGAGAATAATGGGACTCAATGCTGGTTTAATTTCTACTTTTTCTTGTTTCAGTTATCCATGTCAATTTCAG GAGGATAGTGCAGTTACTTTTATTTTATTTTTTAAAAAAGTTTATCTCCTATTTGTCTGTTTTGAATTCCATTTTATGGT ATTCACATTCTTGCTTACTAGGTAGTGAGGAAGGGAATAAGAGAATATAAAATCTTCTGCATAGAGAGTAGATCAGATGA ATGATCCACAAG
CDS sequence (LotjaGi1g1v0703700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCAGGGTAGTGATGAAAACATGGTCCTTTCCTCAGAGGATTCTTCATCCCCAGATGAGACTGAGTGTCACCTTCAATT GGGTCTCTCCTTGTCCCTCTCTCCCTATGCCACTTCTTCTTTAAGCAGCAGAAGCAGGACTAGTTCTCATTCTCATTCTG TTCTCACCAATAACGCTCCCACCAGTCAAGTAGTTGGATGGCCCCCTCTCAGAGCATATAGGATGAACAGCTATAATAGC CATGCAAAATCCCAAGTCACTGAAGTATTCAATTCTATGGTTGAGAACAGTAAGGCCAATATTGCTGTGGTAAGGAAGAG TTCTGACAATGGCAGTGTTGATAATAGTATCATTGGCAAAGAAAACAGAAACCCCAGGACCAGGAGTTCCCTGTTTGTGA AAGTAAAAATGGATGGGGTACCAATTGGAAGGAAGGTTGATTTAAGTGCTCATAGTTCTTATGAAACCTTAGCTCAAAGC TTGGAGGATATGTTTAATGAACCAAATACAGTTCTCACTTGCAAAGTTGGACTAAATGGAGTGAATCATGGTATTATAGC TGGAGCAGATAGGCACTCAAAATTGTTTGATGGATCTTCCAACTTTGTGCTTACTTATGAAGACAAGGAAGGAGACTGGA TGCTTGTTGGAGATGTTCCTTGGTGGATGTTCATTAGCTCTGTTAGGAGGCTAAGAATCATGAGGACATCTGAGGCTAAT GGACTTGATTGGAAGAACAGAACAGCAGATTGA
Protein sequence (LotjaGi1g1v0703700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MQGSDENMVLSSEDSSSPDETECHLQLGLSLSLSPYATSSLSSRSRTSSHSHSVLTNNAPTSQVVGWPPLRAYRMNSYNS HAKSQVTEVFNSMVENSKANIAVVRKSSDNGSVDNSIIGKENRNPRTRSSLFVKVKMDGVPIGRKVDLSAHSSYETLAQS LEDMFNEPNTVLTCKVGLNGVNHGIIAGADRHSKLFDGSSNFVLTYEDKEGDWMLVGDVPWWMFISSVRRLRIMRTSEAN GLDWKNRTAD
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 24 | 24 | - | – | |
| PANTHER | 38 | 243 | 206 | 5.0E-77 | – | |
| PANTHER | 38 | 243 | 206 | 5.0E-77 | ||
| MobiDBLite | 39 | 61 | 23 | - | – | |
| Pfam | 44 | 242 | 199 | 7.9E-59 | ||
| SUPERFAMILY | 124 | 234 | 111 | 1.81E-18 | – | |
| Gene3D | 125 | 248 | 124 | 7.6E-40 | – | |
| ProSiteProfiles | 130 | 238 | 109 | 27.038 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Cellular component | Nucleus | A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. | ||
| Biological process | Regulation of transcription, DNA-templated | Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription. |
Expression pattern of LotjaGi1g1v0703700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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