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IPR003311

Source: InterPro

Description

IPR003311 is a AUX/IAA protein.

<p>The Aux/IAA proteins are key regulators of auxin-modulated gene expression [[cite:PUB00014766]]. The plant hormone auxin (indole-3-acetic acid, IAA) regulates diverse cellular and developmental responses in plants, including cell division, expansion, differentiation and patterning of embryo responses [[cite:PUB00014762]]. Auxin can regulate the gene expression of several families, including GH3 and SAUR, as well as Aux/IAA itself. The Aux/IAA proteins act as repressors of auxin-induced gene expression, possibly through modulating the activity of DNA-binding auxin response factors (ARFs). Aux/IAA and ARF are thought to interact through C-terminal protein-protein interaction domains found in both Aux/IAA and ARF.</p> <p>Recent evidence suggests that Aux/IAA proteins can also mediate light responses [[cite:PUB00014763]]. Some members of the Aux/IAA family are longer and contain an N-terminal DNA binding domain [[cite:PUB00008092]] and may have an early function in the establishment of vascular and body patterns in embryonic and post-embryonic development in some plants.</p>

This description is obtained from EB-eye REST.

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0005634
Cellular component Nucleus A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
Subterm of
GO:0006355
Biological process Regulation of transcription, DNA-templated Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
Subterm of
Regulates

Associated Lotus transcripts 69

Transcript Name Description Predicted domains Domain count
Lj0g3v0056359.1
– Auxin-induced protein [Medicago truncatula] gi|357440509|ref|XP_003590532.1|
Domains
9
Lj0g3v0056389.1
– Auxin-induced protein AUX28 [Glycine max] gi|351721306|ref|NP_001236693.1|
Domains
9
Lj0g3v0087079.1
– Auxin-induced protein [Medicago truncatula] gi|357440509|ref|XP_003590532.1|
Domains
9
Lj0g3v0098189.1
– PREDICTED: auxin-responsive protein IAA9-like [Glycine max] gi|356552993|ref|XP_003544843.1|
Domains
9
Lj0g3v0158339.1
– PREDICTED: auxin-responsive protein IAA29-like [Cicer arietinum] gi|502132393|ref|XP_004501338.1|
Domains
10
Lj0g3v0276669.1
– PREDICTED: auxin-responsive protein IAA30-like [Glycine max] gi|356533499|ref|XP_003535301.1|
Domains
10
Lj0g3v0298829.1
– Indole-3-acetic acid inducible [Medicago truncatula] gi|357479657|ref|XP_003610114.1|
Domains
8
Lj0g3v0343839.1
– PREDICTED: auxin-responsive protein IAA12-like isoform X1 [Cicer arietinum] gi|502114816|ref|XP_004495058.1|
Domains
9
Lj1g3v4450490.1
– RecName: Full=Auxin-induced protein 22E; AltName: Full=Indole-3-acetic acid-induced protein ARG14gi|2224733|dbj|BAA20849.1| Aux22e [Vigna radiata] gi|11131105|sp|O24543.1|AX22E_PHAAU
Domains
9
Lj1g3v4450520.1
– PREDICTED: auxin-induced protein AUX28-like [Cicer arietinum] gi|502109838|ref|XP_004493739.1|
Domains
8
Lj1g3v4528360.1
– PREDICTED: auxin-responsive protein IAA11-like [Glycine max] gi|356545900|ref|XP_003541371.1|
Domains
9
Lj1g3v4830140.1
– PREDICTED: auxin-responsive protein IAA20-like [Glycine max] gi|356505689|ref|XP_003521622.1|
Domains
9
Lj1g3v4984100.1
– PREDICTED: auxin-responsive protein IAA16-like [Cicer arietinum] gi|502117384|ref|XP_004495802.1|
Domains
9
Lj1g3v4984100.2
– PREDICTED: auxin-responsive protein IAA16-like [Cicer arietinum] gi|502117384|ref|XP_004495802.1|
Domains
8
Lj2g3v0824590.1
– PREDICTED: auxin-responsive protein IAA27-like [Glycine max] gi|356531293|ref|XP_003534212.1|
Domains
8
Lj2g3v0824590.2
– PREDICTED: auxin-responsive protein IAA27-like [Glycine max] gi|356531293|ref|XP_003534212.1|
Domains
8
Lj2g3v1468200.1
– PREDICTED: auxin-responsive protein IAA8 [Glycine max] gi|356496563|ref|XP_003517136.1|
Domains
8
Lj2g3v2147100.1
– PREDICTED: auxin-responsive protein IAA9-like [Glycine max] gi|356552993|ref|XP_003544843.1|
Domains
9
Lj3g3v0290120.1
– PREDICTED: auxin-responsive protein IAA26-like [Glycine max] gi|356556539|ref|XP_003546582.1|
Domains
9
Lj3g3v2247090.1
– Auxin-induced protein AUX22 [Glycine max] gi|351725121|ref|NP_001237849.1|
Domains
9
Lj3g3v2318210.1
– Auxin-responsive protein IAA18 [Medicago truncatula] gi|357513517|ref|XP_003627047.1|
Domains
9
Lj3g3v2318210.2
– Auxin-responsive protein IAA18 [Medicago truncatula] gi|357513517|ref|XP_003627047.1|
Domains
9
Lj4g3v1881520.1
– PREDICTED: auxin-responsive protein IAA12-like [Glycine max] gi|356548488|ref|XP_003542633.1|
Domains
14
Lj4g3v3060360.1
– Phytochrome-associated protein 2 isoform 1 [Theobroma cacao] gi|508783469|gb|EOY30725.1|
Domains
8
Lj4g3v3060360.2
– Auxin-responsive protein (Aux/IAA) [Medicago truncatula] gi|357520945|ref|XP_003630761.1|
Domains
8
Lj4g3v3060360.3
– PREDICTED: auxin-responsive protein IAA27-like [Cicer arietinum] gi|502138562|ref|XP_004503453.1|
Domains
4
Lj5g3v1204430.1
– Auxin-induced protein ali50 [Glycine max] gi|358248890|ref|NP_001240213.1|
Domains
9
Lj5g3v1204430.2
– Auxin-induced protein ali50 [Glycine max] gi|358248890|ref|NP_001240213.1|
Domains
9
Lj5g3v1204430.3
– Indoleacetic acid-induced-like protein [Medicago truncatula] gi|357443057|ref|XP_003591806.1|
Domains
8
Lj5g3v1206590.1
– PREDICTED: auxin-induced protein 22B-like [Cicer arietinum] gi|502116361|ref|XP_004495393.1|
Domains
9
Lj5g3v1412900.1
– PREDICTED: auxin-responsive protein IAA16-like [Cicer arietinum] gi|502117384|ref|XP_004495802.1|
Domains
9
Lj5g3v1412900.2
– PREDICTED: auxin-responsive protein IAA16-like [Cicer arietinum] gi|502117384|ref|XP_004495802.1|
Domains
9
Lj5g3v2179870.1
– PREDICTED: auxin-responsive protein IAA32-like [Cicer arietinum] gi|502120678|ref|XP_004497045.1|
Domains
8
LotjaGi1g1v0132800.1
– Auxin-responsive protein; TAIR: AT5G65670.2 indole-3-acetic acid inducible 9; Swiss-Prot: sp|Q38827|IAA9_ARATH Auxin-responsive protein IAA9; TrEMBL-Plants: tr|I3SE46|I3SE46_LOTJA Auxin-induced protein; Found in the gene: LotjaGi1g1v0132800
Domains
10
LotjaGi1g1v0132800.2
– Auxin-responsive protein; TAIR: AT5G65670.2 indole-3-acetic acid inducible 9; Swiss-Prot: sp|Q38827|IAA9_ARATH Auxin-responsive protein IAA9; TrEMBL-Plants: tr|I3SE46|I3SE46_LOTJA Auxin-induced protein; Found in the gene: LotjaGi1g1v0132800
Domains
10
LotjaGi1g1v0382800.1
– Auxin-responsive protein; TAIR: AT4G32280.1 indole-3-acetic acid inducible 29; Swiss-Prot: sp|Q93WC4|IAA29_ARATH Auxin-responsive protein IAA29; TrEMBL-Plants: tr|I1JUC1|I1JUC1_SOYBN Auxin-induced protein; Found in the gene: LotjaGi1g1v0382800
Domains
11
LotjaGi1g1v0382800.2
– Auxin-responsive protein; TAIR: AT4G32280.2 indole-3-acetic acid inducible 29; Swiss-Prot: sp|Q93WC4|IAA29_ARATH Auxin-responsive protein IAA29; TrEMBL-Plants: tr|I1JUC1|I1JUC1_SOYBN Auxin-induced protein; Found in the gene: LotjaGi1g1v0382800
Domains
9
LotjaGi1g1v0438400_LC.1
– Auxin-responsive protein; TAIR: AT3G16500.1 phytochrome-associated protein 1; Swiss-Prot: sp|Q69TU6|IAA22_ORYSJ Auxin-responsive protein IAA22; TrEMBL-Plants: tr|C6TIP2|C6TIP2_SOYBN Auxin-induced protein; Found in the gene: LotjaGi1g1v0438400_LC
Domains
8
LotjaGi1g1v0703700.1
– Auxin-responsive protein; TAIR: AT4G28640.1 indole-3-acetic acid inducible 11; Swiss-Prot: sp|Q38829|IAA11_ARATH Auxin-responsive protein IAA11; TrEMBL-Plants: tr|I3S1W8|I3S1W8_LOTJA Auxin-induced protein; Found in the gene: LotjaGi1g1v0703700
Domains
10
LotjaGi1g1v0713700.1
– Auxin-responsive protein; TAIR: AT4G14550.1 indole-3-acetic acid inducible 14; Swiss-Prot: sp|P13089|AUX28_SOYBN Auxin-induced protein AUX28; TrEMBL-Plants: tr|I3S744|I3S744_LOTJA Auxin-induced protein; Found in the gene: LotjaGi1g1v0713700
Domains
9
LotjaGi1g1v0713900.1
– Auxin-responsive protein; TAIR: AT5G43700.1 AUX/IAA transcriptional regulator family protein; Swiss-Prot: sp|O24543|AX22E_VIGRR Auxin-induced protein 22E; TrEMBL-Plants: tr|I3SQD1|I3SQD1_LOTJA Auxin-induced protein; Found in the gene: LotjaGi1g1v0713900
Domains
10
LotjaGi1g1v0754100.1
– Auxin-responsive protein; TAIR: AT3G62100.1 indole-3-acetic acid inducible 30; Swiss-Prot: sp|Q9M1R4|IAA30_ARATH Auxin-responsive protein IAA30; TrEMBL-Plants: tr|I1JQX8|I1JQX8_SOYBN Auxin-induced protein; Found in the gene: LotjaGi1g1v0754100
Domains
10
LotjaGi1g1v0754100.2
– Auxin-responsive protein; TAIR: AT3G62100.1 indole-3-acetic acid inducible 30; Swiss-Prot: sp|Q9M1R4|IAA30_ARATH Auxin-responsive protein IAA30; TrEMBL-Plants: tr|I1JQX8|I1JQX8_SOYBN Auxin-induced protein; Found in the gene: LotjaGi1g1v0754100
Domains
10
LotjaGi1g1v0781800.1
– Auxin-responsive protein; TAIR: AT3G04730.1 indoleacetic acid-induced protein 16; Swiss-Prot: sp|O24407|IAA16_ARATH Auxin-responsive protein IAA16; TrEMBL-Plants: tr|V7BQ77|V7BQ77_PHAVU Auxin-induced protein; Found in the gene: LotjaGi1g1v0781800
Domains
10
LotjaGi2g1v0125400.1
– Auxin-responsive protein; TAIR: AT3G17600.1 indole-3-acetic acid inducible 31; Swiss-Prot: sp|Q8H174|IAA31_ARATH Auxin-responsive protein IAA31; TrEMBL-Plants: tr|I1LYD6|I1LYD6_SOYBN Auxin-induced protein; Found in the gene: LotjaGi2g1v0125400
Domains
10
LotjaGi2g1v0125400.2
– Auxin-responsive protein; TAIR: AT3G17600.1 indole-3-acetic acid inducible 31; Swiss-Prot: sp|Q8H174|IAA31_ARATH Auxin-responsive protein IAA31; TrEMBL-Plants: tr|I1LYD6|I1LYD6_SOYBN Auxin-induced protein; Found in the gene: LotjaGi2g1v0125400
Domains
10
LotjaGi2g1v0220300.1
– Auxin-responsive protein; TAIR: AT4G29080.1 phytochrome-associated protein 2; Swiss-Prot: sp|Q9ZSY8|IAA27_ARATH Auxin-responsive protein IAA27; TrEMBL-Plants: tr|V7C7G7|V7C7G7_PHAVU Auxin-induced protein; Found in the gene: LotjaGi2g1v0220300
Domains
9
LotjaGi2g1v0220300.2
– Auxin-responsive protein; TAIR: AT4G29080.1 phytochrome-associated protein 2; Swiss-Prot: sp|Q9ZSY8|IAA27_ARATH Auxin-responsive protein IAA27; TrEMBL-Plants: tr|V7C7G7|V7C7G7_PHAVU Auxin-induced protein; Found in the gene: LotjaGi2g1v0220300
Domains
9
LotjaGi2g1v0331600.1
– Auxin-responsive protein; TAIR: AT2G22670.1 indoleacetic acid-induced protein 8; Swiss-Prot: sp|Q38826|IAA8_ARATH Auxin-responsive protein IAA8; TrEMBL-Plants: tr|I3SD28|I3SD28_LOTJA Auxin-induced protein; Found in the gene: LotjaGi2g1v0331600
Domains
9
LotjaGi3g1v0019000.1
– Auxin-responsive protein; TAIR: AT4G29080.1 phytochrome-associated protein 2; Swiss-Prot: sp|Q9ZSY8|IAA27_ARATH Auxin-responsive protein IAA27; TrEMBL-Plants: tr|G7IUP2|G7IUP2_MEDTR Auxin-induced protein; Found in the gene: LotjaGi3g1v0019000
Domains
10
LotjaGi3g1v0021800.1
– Auxin-responsive protein; TAIR: AT3G16500.1 phytochrome-associated protein 1; Swiss-Prot: sp|Q8LAL2|IAA26_ARATH Auxin-responsive protein IAA26; TrEMBL-Plants: tr|A0A0L9UP30|A0A0L9UP30_PHAAN Auxin-induced protein; Found in the gene: LotjaGi3g1v0021800
Domains
10
LotjaGi3g1v0187100_LC.1
– Auxin-responsive protein; TAIR: AT4G32280.3 indole-3-acetic acid inducible 29; Swiss-Prot: sp|Q69TU6|IAA22_ORYSJ Auxin-responsive protein IAA22; TrEMBL-Plants: tr|C6TIP2|C6TIP2_SOYBN Auxin-induced protein; Found in the gene: LotjaGi3g1v0187100_LC
Domains
8
LotjaGi3g1v0361600.1
– Auxin-responsive protein; TAIR: AT3G15540.1 indole-3-acetic acid inducible 19; Swiss-Prot: sp|P13088|AUX22_SOYBN Auxin-induced protein AUX22; TrEMBL-Plants: tr|I3SHP3|I3SHP3_LOTJA Auxin-induced protein; Found in the gene: LotjaGi3g1v0361600
Domains
10
LotjaGi3g1v0371700.1
– Auxin-responsive protein; TAIR: AT3G16500.1 phytochrome-associated protein 1; Swiss-Prot: sp|Q8LAL2|IAA26_ARATH Auxin-responsive protein IAA26; TrEMBL-Plants: tr|A0A0R0IPS7|A0A0R0IPS7_SOYBN Auxin-induced protein; Found in the gene: LotjaGi3g1v0371700
Domains
10
LotjaGi3g1v0371700.2
– Auxin-responsive protein; TAIR: AT3G16500.1 phytochrome-associated protein 1; Swiss-Prot: sp|Q8LAL2|IAA26_ARATH Auxin-responsive protein IAA26; TrEMBL-Plants: tr|A0A0R0IPS7|A0A0R0IPS7_SOYBN Auxin-induced protein; Found in the gene: LotjaGi3g1v0371700
Domains
10
LotjaGi3g1v0371700.3
– Auxin-responsive protein; TAIR: AT3G16500.1 phytochrome-associated protein 1; Swiss-Prot: sp|Q8LAL2|IAA26_ARATH Auxin-responsive protein IAA26; TrEMBL-Plants: tr|A0A0R0IPS7|A0A0R0IPS7_SOYBN Auxin-induced protein; Found in the gene: LotjaGi3g1v0371700
Domains
10
LotjaGi4g1v0274300.1
– Auxin-responsive protein; TAIR: AT5G43700.1 AUX/IAA transcriptional regulator family protein; Swiss-Prot: sp|P32293|AX22A_VIGRR Auxin-induced protein 22A; TrEMBL-Plants: tr|V7CA22|V7CA22_PHAVU Auxin-induced protein; Found in the gene: LotjaGi4g1v0274300
Domains
14
LotjaGi4g1v0301100.1
– Auxin-responsive protein; TAIR: AT5G57420.1 indole-3-acetic acid inducible 33; Swiss-Prot: sp|Q9FKM7|IAA33_ARATH Auxin-responsive protein IAA33; TrEMBL-Plants: tr|I3S3X0|I3S3X0_LOTJA Auxin-induced protein; Found in the gene: LotjaGi4g1v0301100
Domains
9
LotjaGi4g1v0317400.1
– Auxin-responsive protein; TAIR: AT3G17600.1 indole-3-acetic acid inducible 31; Swiss-Prot: sp|Q8H174|IAA31_ARATH Auxin-responsive protein IAA31; TrEMBL-Plants: tr|I1LYD6|I1LYD6_SOYBN Auxin-induced protein; Found in the gene: LotjaGi4g1v0317400
Domains
10
LotjaGi5g1v0152900.1
– Auxin-responsive protein; TAIR: AT4G28640.1 indole-3-acetic acid inducible 11; Swiss-Prot: sp|Q38829|IAA11_ARATH Auxin-responsive protein IAA11; TrEMBL-Plants: tr|V7BG36|V7BG36_PHAVU Auxin-induced protein; Found in the gene: LotjaGi5g1v0152900
Domains
10
LotjaGi5g1v0174700.1
– Auxin-responsive protein; TAIR: AT5G43700.1 AUX/IAA transcriptional regulator family protein; Swiss-Prot: sp|O24542|AX22D_VIGRR Auxin-induced protein 22D; TrEMBL-Plants: tr|B7FMP7|B7FMP7_MEDTR Auxin-induced protein; Found in the gene: LotjaGi5g1v0174700
Domains
10
LotjaGi5g1v0174800.1
– Auxin-responsive protein; TAIR: AT4G14550.1 indole-3-acetic acid inducible 14; Swiss-Prot: sp|P13089|AUX28_SOYBN Auxin-induced protein AUX28; TrEMBL-Plants: tr|A0A0B2QB67|A0A0B2QB67_GLYSO Auxin-induced protein; Found in the gene: LotjaGi5g1v0174800
Domains
10
LotjaGi5g1v0191800.1
– Auxin-responsive protein; TAIR: AT4G14550.1 indole-3-acetic acid inducible 14; Swiss-Prot: sp|Q38832|IAA14_ARATH Auxin-responsive protein IAA14; TrEMBL-Plants: tr|I3SVV1|I3SVV1_LOTJA Auxin-induced protein; Found in the gene: LotjaGi5g1v0191800
Domains
10
LotjaGi5g1v0192400.1
– Auxin-responsive protein; TAIR: AT5G43700.1 AUX/IAA transcriptional regulator family protein; Swiss-Prot: sp|P32294|AX22B_VIGRR Auxin-induced protein 22B; TrEMBL-Plants: tr|I3SUD8|I3SUD8_LOTJA Auxin-induced protein; Found in the gene: LotjaGi5g1v0192400
Domains
10
LotjaGi5g1v0212500.1
– Auxin-responsive protein; TAIR: AT3G04730.1 indoleacetic acid-induced protein 16; Swiss-Prot: sp|O24407|IAA16_ARATH Auxin-responsive protein IAA16; TrEMBL-Plants: tr|I3STT1|I3STT1_LOTJA Auxin-induced protein; Found in the gene: LotjaGi5g1v0212500
Domains
10
LotjaGi5g1v0212500.2
– Auxin-responsive protein; TAIR: AT3G04730.1 indoleacetic acid-induced protein 16; Swiss-Prot: sp|O24407|IAA16_ARATH Auxin-responsive protein IAA16; TrEMBL-Plants: tr|I3STT1|I3STT1_LOTJA Auxin-induced protein; Found in the gene: LotjaGi5g1v0212500
Domains
10
LotjaGi5g1v0237500.1
– Auxin-responsive protein; TAIR: AT3G62100.1 indole-3-acetic acid inducible 30; Swiss-Prot: sp|Q9M1R4|IAA30_ARATH Auxin-responsive protein IAA30; TrEMBL-Plants: tr|A0A0L9TXV6|A0A0L9TXV6_PHAAN Auxin-induced protein; Found in the gene: LotjaGi5g1v0237500
Domains
11
LotjaGi5g1v0335600.1
– Auxin-responsive protein; TAIR: AT2G01200.1 indole-3-acetic acid inducible 32; Swiss-Prot: sp|Q8RYC6|IAA32_ARATH Auxin-responsive protein IAA32; TrEMBL-Plants: tr|I1LES9|I1LES9_SOYBN Auxin-induced protein; Found in the gene: LotjaGi5g1v0335600
Domains
9
LotjaGi5g1v0336100.1
– Auxin-responsive protein; TAIR: AT2G01200.1 indole-3-acetic acid inducible 32; Swiss-Prot: sp|Q8RYC6|IAA32_ARATH Auxin-responsive protein IAA32; TrEMBL-Plants: tr|I1LES9|I1LES9_SOYBN Auxin-induced protein; Found in the gene: LotjaGi5g1v0336100
Domains
9

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
SSF54277 SUPERFAMILY 1 1.45