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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0705600 |
| Transcript ID | LotjaGi1g1v0705600.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Peptide transporter; TAIR: AT5G46050.1 peptide transporter 3; Swiss-Prot: sp|Q9FNL7|PTR3_ARATH Protein NRT1/ PTR FAMILY 5.2; TrEMBL-Plants: tr|I1JP63|I1JP63_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0705600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:127405813..127409299) extracted from Lotus japonicus Gifu genome v1.2.
GTTTTTATTAACGATTATTTCAACATCAATCTTTTTTAATAGTTAATTATCTTAACATCTAAAACAAATAGGGCATTTTC TCTTGGTTTTTTTTTGAACTGCATTTTATTTTGGTACAATAAGCAAATAGGCTTTTAATATAGTTCTGGCCGTTCTAATT AGCAGAAAATTTTCGCAGAAGCTGATGGCTTTTTCTGAAATGTCAATTTCAAGTCAATAGTTTAAAGGTAAAAGTCACCA AACACAAAAATATGAAAAGAGAGACAGACAAAGTGCAAATAAATGACACAAGGTACAAAACAAAATGTTTTTCTTTTTTG CATTAGATTTCTTTTAACTTCATTCAATTTGAGCATTAATGCATGACCTTATAATCTTTACATCATAAAACTATTTAAAT GTTCACATGAGAGGTTACAATCTTCACATGATTATCCAGCATTATGGCAGTGGTGGGAGAATTAAAAAGCCCTGCAATAT TGGAGAGTGAAGATTACACTCAAGATGGTACAGTGGACCTAAAAGGTAGACCAGTTTTAAGATCAAAGACTGGAACATGG AGAGCTTGTTCCTTCATAGTAGGTAATTGTAACCTTCTGGAACCTTAAGGCCATTCTGAAACTTGCTTCAAAATTCAGCA ATTGTTATACCACTAATGAATTTTTTTTTATCCCTTCATTTCTGTTTTGAGGATTACCAATAGCAATCACTATGAGTGGT CATTTACTGATTGTAACTTCTAAATATGGTAAATGCATGTGTTTATAATAGGTTATGAAATGATTGAAAGGATGGCATAC TATGGGATAGCATCAAACCTAGTGCTGTACCTGACAAAGAAGCTCCATGAGGGTACTGTAAAATCTTCAAACCATGTTAC CAACTGGGTTGGCACAGTGTGGATTATGCCAGCTGCAGGGGCTTATATAGCTGACGCCTATCTTGGCAGATATTGGACCT TTGTAACAGCATCTGGCATTTACCTTCTGGTATGAATTGTGAGATTCATTTAATTTCACCTCTCCAAATCAAAGAGTGAG ATCATAACAACATTGGATGAACAACATTAATAATTAGCATGTTTGGATTAATTTATGTTTTCTCTGAATCAATTCTGAAA TCTAGAAGCTAGTTTTCAGAATTTATTCTGACTTTAAAATTAAGTATAGAATAATTTCCTCACATGCCTAATTTTAACAA AAAGTTCAACTCTACTAATTTTAGTTAATGTCTTATCTTTCTTGGAAGATGAATGAATGGTAAACAATAAACATAATGTT CCTATAATGATGTAGACCAAATACTTACCTCATTTTGTTACGAATCAGAAAGTATGAAAACGGAAAAATAACACAAAACA AAACATTTTTTCTTCACAAAACAGTAGCCTAAACACACTTGACGAAAAATGAAACAGGTAACCAAACGGGCCATGCCATG ATATACGATGTGATCTGATGGGAAGAAACTGATAGAGAGAAAAAATGTGGTGTTCAAAAATCAAGATTGATCTGTATTTC AATAGGTATATAAAAACTAAACAGGACATGCTATTGTCTACTTTGGTTTTAGGGAATGTGTTTGCTGACACTAGCAGTAT CACTACCAGCTCTAAGACCACCACCATGTCCTCCAGGGGTAGCAGACAAGGATTGCCAACAAGCATCATCATTGCAAATG GGTATTTTCTTCTTTGCCTTGTACATCATTGCAGCAGGCACAGGGGGAACCAAGCCCAACATTTCCACCATGGGAGCAGA CCAATTTGATGACTTTGAGCCCAAAGAAAGACACCATAAGCTTTCTTTCTACAATTGGTGGGTGTTTTATATCTTAATTG GAACCATTTCTGCCCAAACTGCATTAGTTTACATACAAGACAATGTGGGCTTTGCACTTGGATATGGAATTCCAACCATT GGACTTGCCATTTCAATATTGGTGTTTCTGTTAGGAACTCCACTTTATAGGCATAGATTACCCTCAGGAAGCCCTTTAAC TAGGATGGTTCAGGTCATTGTGGCTGCAATGAGCAAGTGGAAGGTAAAAGTCCCAGATGATCCAAAAGAGTTACATGAAG TGAGCACAGAAGAGTATGCAAGTAAAGGCAGAAACATAATTGATCACAGCTCTTCAATGAAGTTAGTAGTCTACTTTTTA CCACCTCAAATTTCACCGATTAGAATCGTCTCATGTCACAGTGTCATGTGAAACTTTGTCTGTCTCTCTTCATAAATATT TAGAAGACCCCAGCTGTTTAATAGGTATGAAGAGAGATATAGACACAATTTTAACATGGCACTGTCATGTGAAATTTTCA CATGAGAAGATCCTGATCCAAATTTCACTGGTTTTGTGTTTTTGAATGACAAAGAAACTTATATATGGAACAAACAATAC AAAAATGTTATAATCTTGACAAATGCTCACAGATTCCTTGACAAGGCAGCAACAAAGACTGGTCAAACTTCACCATGGAT GCTTTGTACTGTGACCCAAGTTGAGGAAACCAAGCAAATGATGAAAATGATTCCAATTCTAATAACTACATGTATCCCAA GCACCATCATAGCTCAAACCACCACACTCTTCATTAGGCAAGGCACTACTCTAGACCGGAGCATGGGACCTCATTTTGAA ATACCTCCTGCATGTCTTACAGCATTTATAAACATCTTCATGCTGATAAGCGTTGTTATCTATGACCGTGTTTTTGTTCC TGCGATCCGGCGCTACACAAAGAACCCCAGAGGGATCACAATGCTGCAGAGACTTGGGATTGGCCTTGTTCTGCACATCA TTATAATGACCACTGCATGCCTGGTTGAGAGGAAGAGACTCGGTGTTGCAAGAGAAAAAAACCTCTTAGGCCAGCATGAC ACAATTCCTCTTACAATTTTCATTCTCCTCCCTCAGTTTGGTCTGACAGGGATTGCTGATACCTTTGTGGATGTTGCTAA GCTAGAATTCTTCTATGATCAAGCACCAGAAGCCATGAAAAGTCTTGGAACATCATATTTCACAACCACCCAGAGCATTG GGAGTTTTTTCAGTACTTTTCTTTTATCAACTGTGGCTGATCTCACCCGCAAACATGGCCATAAGGGTTGGATTTTGGAT AATCTAAACGTCTCCCATATAGATTACTATTATGCATTCTTGGCCATGCTGAGCACTATCAACTTCCTTTGCTTTGTTAT TGTTGCCAAGTTCTTTGTCTATAATTATGATGTAACACAAACCAAAATGGACTTGGAGTTGGAAATGAACACTGCTTCAG CTTAGAACAAGACTAGAATAAGCCAAGGTACCTCCACAACCAGATGCCAAGTCCTTGGGAAAACAATCAAACAGCTTTTG TGCTCTTGATATAAGCCTATTGAGAATGTAAAGAAATCTTCAGATTTGTCCAGCTGTGATGATTCATTTTCTTTGCTTAT GTAGACCCTATCTATATATATTTATGGGATCAATAAGACAATTAAGG
CDS sequence (LotjaGi1g1v0705600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAAAGAGAGACAGACAAAGTGCAAATAAATGACACAAGCATTATGGCAGTGGTGGGAGAATTAAAAAGCCCTGCAAT ATTGGAGAGTGAAGATTACACTCAAGATGGTACAGTGGACCTAAAAGGTAGACCAGTTTTAAGATCAAAGACTGGAACAT GGAGAGCTTGTTCCTTCATAGTAGGTTATGAAATGATTGAAAGGATGGCATACTATGGGATAGCATCAAACCTAGTGCTG TACCTGACAAAGAAGCTCCATGAGGGTACTGTAAAATCTTCAAACCATGTTACCAACTGGGTTGGCACAGTGTGGATTAT GCCAGCTGCAGGGGCTTATATAGCTGACGCCTATCTTGGCAGATATTGGACCTTTGTAACAGCATCTGGCATTTACCTTC TGGGAATGTGTTTGCTGACACTAGCAGTATCACTACCAGCTCTAAGACCACCACCATGTCCTCCAGGGGTAGCAGACAAG GATTGCCAACAAGCATCATCATTGCAAATGGGTATTTTCTTCTTTGCCTTGTACATCATTGCAGCAGGCACAGGGGGAAC CAAGCCCAACATTTCCACCATGGGAGCAGACCAATTTGATGACTTTGAGCCCAAAGAAAGACACCATAAGCTTTCTTTCT ACAATTGGTGGGTGTTTTATATCTTAATTGGAACCATTTCTGCCCAAACTGCATTAGTTTACATACAAGACAATGTGGGC TTTGCACTTGGATATGGAATTCCAACCATTGGACTTGCCATTTCAATATTGGTGTTTCTGTTAGGAACTCCACTTTATAG GCATAGATTACCCTCAGGAAGCCCTTTAACTAGGATGGTTCAGGTCATTGTGGCTGCAATGAGCAAGTGGAAGGTAAAAG TCCCAGATGATCCAAAAGAGTTACATGAAGTGAGCACAGAAGAGTATGCAAGTAAAGGCAGAAACATAATTGATCACAGC TCTTCAATGAAATTCCTTGACAAGGCAGCAACAAAGACTGGTCAAACTTCACCATGGATGCTTTGTACTGTGACCCAAGT TGAGGAAACCAAGCAAATGATGAAAATGATTCCAATTCTAATAACTACATGTATCCCAAGCACCATCATAGCTCAAACCA CCACACTCTTCATTAGGCAAGGCACTACTCTAGACCGGAGCATGGGACCTCATTTTGAAATACCTCCTGCATGTCTTACA GCATTTATAAACATCTTCATGCTGATAAGCGTTGTTATCTATGACCGTGTTTTTGTTCCTGCGATCCGGCGCTACACAAA GAACCCCAGAGGGATCACAATGCTGCAGAGACTTGGGATTGGCCTTGTTCTGCACATCATTATAATGACCACTGCATGCC TGGTTGAGAGGAAGAGACTCGGTGTTGCAAGAGAAAAAAACCTCTTAGGCCAGCATGACACAATTCCTCTTACAATTTTC ATTCTCCTCCCTCAGTTTGGTCTGACAGGGATTGCTGATACCTTTGTGGATGTTGCTAAGCTAGAATTCTTCTATGATCA AGCACCAGAAGCCATGAAAAGTCTTGGAACATCATATTTCACAACCACCCAGAGCATTGGGAGTTTTTTCAGTACTTTTC TTTTATCAACTGTGGCTGATCTCACCCGCAAACATGGCCATAAGGGTTGGATTTTGGATAATCTAAACGTCTCCCATATA GATTACTATTATGCATTCTTGGCCATGCTGAGCACTATCAACTTCCTTTGCTTTGTTATTGTTGCCAAGTTCTTTGTCTA TAATTATGATGTAACACAAACCAAAATGGACTTGGAGTTGGAAATGAACACTGCTTCAGCTTAG
Protein sequence (LotjaGi1g1v0705600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKRETDKVQINDTSIMAVVGELKSPAILESEDYTQDGTVDLKGRPVLRSKTGTWRACSFIVGYEMIERMAYYGIASNLVL YLTKKLHEGTVKSSNHVTNWVGTVWIMPAAGAYIADAYLGRYWTFVTASGIYLLGMCLLTLAVSLPALRPPPCPPGVADK DCQQASSLQMGIFFFALYIIAAGTGGTKPNISTMGADQFDDFEPKERHHKLSFYNWWVFYILIGTISAQTALVYIQDNVG FALGYGIPTIGLAISILVFLLGTPLYRHRLPSGSPLTRMVQVIVAAMSKWKVKVPDDPKELHEVSTEEYASKGRNIIDHS SSMKFLDKAATKTGQTSPWMLCTVTQVEETKQMMKMIPILITTCIPSTIIAQTTTLFIRQGTTLDRSMGPHFEIPPACLT AFINIFMLISVVIYDRVFVPAIRRYTKNPRGITMLQRLGIGLVLHIIIMTTACLVERKRLGVAREKNLLGQHDTIPLTIF ILLPQFGLTGIADTFVDVAKLEFFYDQAPEAMKSLGTSYFTTTQSIGSFFSTFLLSTVADLTRKHGHKGWILDNLNVSHI DYYYAFLAMLSTINFLCFVIVAKFFVYNYDVTQTKMDLELEMNTASA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 121 | 121 | - | – | |
| Gene3D | 27 | 594 | 568 | 2.4E-200 | – | |
| PANTHER | 30 | 594 | 565 | 0.0 | – | |
| PANTHER | 30 | 594 | 565 | 0.0 | ||
| SUPERFAMILY | 45 | 584 | 540 | 5.89E-16 | ||
| CDD | 54 | 587 | 534 | 0.0 | – | |
| Pfam | 122 | 551 | 430 | 2.7E-104 | ||
| Phobius | 122 | 148 | 27 | - | – | |
| TMHMM | 123 | 145 | 23 | - | – | |
| Phobius | 149 | 167 | 19 | - | – | |
| TMHMM | 165 | 187 | 23 | - | – | |
| Phobius | 168 | 186 | 19 | - | – | |
| Phobius | 187 | 213 | 27 | - | – | |
| TMHMM | 213 | 235 | 23 | - | – | |
| Phobius | 214 | 235 | 22 | - | – | |
| Phobius | 236 | 240 | 5 | - | – | |
| TMHMM | 239 | 261 | 23 | - | – | |
| Phobius | 241 | 262 | 22 | - | – | |
| Phobius | 263 | 358 | 96 | - | – | |
| TMHMM | 357 | 379 | 23 | - | – | |
| Phobius | 359 | 378 | 20 | - | – | |
| Phobius | 379 | 393 | 15 | - | – | |
| TMHMM | 392 | 414 | 23 | - | – | |
| Phobius | 394 | 414 | 21 | - | – | |
| Phobius | 415 | 434 | 20 | - | – | |
| TMHMM | 435 | 454 | 20 | - | – | |
| Phobius | 435 | 455 | 21 | - | – | |
| Phobius | 456 | 474 | 19 | - | – | |
| TMHMM | 474 | 496 | 23 | - | – | |
| Phobius | 475 | 496 | 22 | - | – | |
| Phobius | 497 | 516 | 20 | - | – | |
| Phobius | 517 | 542 | 26 | - | – | |
| TMHMM | 517 | 539 | 23 | - | – | |
| Phobius | 543 | 561 | 19 | - | – | |
| Phobius | 562 | 586 | 25 | - | – | |
| TMHMM | 565 | 587 | 23 | - | – | |
| Phobius | 587 | 607 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi1g1v0705600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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