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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0705600 |
| Transcript ID | LotjaGi1g1v0705600.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Peptide transporter; TAIR: AT5G46050.1 peptide transporter 3; Swiss-Prot: sp|Q9FNL7|PTR3_ARATH Protein NRT1/ PTR FAMILY 5.2; TrEMBL-Plants: tr|I1JP63|I1JP63_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0705600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:127406274..127409133) extracted from Lotus japonicus Gifu genome v1.2.
TTAAAAAGCCCTGCAATATTGGAGAGTGAAGATTACACTCAAGATGGTACAGTGGACCTAAAAGGTAGACCAGTTTTAAG ATCAAAGACTGGAACATGGAGAGCTTGTTCCTTCATAGTAGGTAATTGTAACCTTCTGGAACCTTAAGGCCATTCTGAAA CTTGCTTCAAAATTCAGCAATTGTTATACCACTAATGAATTTTTTTTTATCCCTTCATTTCTGTTTTGAGGATTACCAAT AGCAATCACTATGAGTGGTCATTTACTGATTGTAACTTCTAAATATGGTAAATGCATGTGTTTATAATAGGTTATGAAAT GATTGAAAGGATGGCATACTATGGGATAGCATCAAACCTAGTGCTGTACCTGACAAAGAAGCTCCATGAGGGTACTGTAA AATCTTCAAACCATGTTACCAACTGGGTTGGCACAGTGTGGATTATGCCAGCTGCAGGGGCTTATATAGCTGACGCCTAT CTTGGCAGATATTGGACCTTTGTAACAGCATCTGGCATTTACCTTCTGGTATGAATTGTGAGATTCATTTAATTTCACCT CTCCAAATCAAAGAGTGAGATCATAACAACATTGGATGAACAACATTAATAATTAGCATGTTTGGATTAATTTATGTTTT CTCTGAATCAATTCTGAAATCTAGAAGCTAGTTTTCAGAATTTATTCTGACTTTAAAATTAAGTATAGAATAATTTCCTC ACATGCCTAATTTTAACAAAAAGTTCAACTCTACTAATTTTAGTTAATGTCTTATCTTTCTTGGAAGATGAATGAATGGT AAACAATAAACATAATGTTCCTATAATGATGTAGACCAAATACTTACCTCATTTTGTTACGAATCAGAAAGTATGAAAAC GGAAAAATAACACAAAACAAAACATTTTTTCTTCACAAAACAGTAGCCTAAACACACTTGACGAAAAATGAAACAGGTAA CCAAACGGGCCATGCCATGATATACGATGTGATCTGATGGGAAGAAACTGATAGAGAGAAAAAATGTGGTGTTCAAAAAT CAAGATTGATCTGTATTTCAATAGGTATATAAAAACTAAACAGGACATGCTATTGTCTACTTTGGTTTTAGGGAATGTGT TTGCTGACACTAGCAGTATCACTACCAGCTCTAAGACCACCACCATGTCCTCCAGGGGTAGCAGACAAGGATTGCCAACA AGCATCATCATTGCAAATGGGTATTTTCTTCTTTGCCTTGTACATCATTGCAGCAGGCACAGGGGGAACCAAGCCCAACA TTTCCACCATGGGAGCAGACCAATTTGATGACTTTGAGCCCAAAGAAAGACACCATAAGCTTTCTTTCTACAATTGGTGG GTGTTTTATATCTTAATTGGAACCATTTCTGCCCAAACTGCATTAGTTTACATACAAGACAATGTGGGCTTTGCACTTGG ATATGGAATTCCAACCATTGGACTTGCCATTTCAATATTGGTGTTTCTGTTAGGAACTCCACTTTATAGGCATAGATTAC CCTCAGGAAGCCCTTTAACTAGGATGGTTCAGGTCATTGTGGCTGCAATGAGCAAGTGGAAGGTAAAAGTCCCAGATGAT CCAAAAGAGTTACATGAAGTGAGCACAGAAGAGTATGCAAGTAAAGGCAGAAACATAATTGATCACAGCTCTTCAATGAA GTTAGTAGTCTACTTTTTACCACCTCAAATTTCACCGATTAGAATCGTCTCATGTCACAGTGTCATGTGAAACTTTGTCT GTCTCTCTTCATAAATATTTAGAAGACCCCAGCTGTTTAATAGGTATGAAGAGAGATATAGACACAATTTTAACATGGCA CTGTCATGTGAAATTTTCACATGAGAAGATCCTGATCCAAATTTCACTGGTTTTGTGTTTTTGAATGACAAAGAAACTTA TATATGGAACAAACAATACAAAAATGTTATAATCTTGACAAATGCTCACAGATTCCTTGACAAGGCAGCAACAAAGACTG GTCAAACTTCACCATGGATGCTTTGTACTGTGACCCAAGTTGAGGAAACCAAGCAAATGATGAAAATGATTCCAATTCTA ATAACTACATGTATCCCAAGCACCATCATAGCTCAAACCACCACACTCTTCATTAGGCAAGGCACTACTCTAGACCGGAG CATGGGACCTCATTTTGAAATACCTCCTGCATGTCTTACAGCATTTATAAACATCTTCATGCTGATAAGCGTTGTTATCT ATGACCGTGTTTTTGTTCCTGCGATCCGGCGCTACACAAAGAACCCCAGAGGGATCACAATGCTGCAGAGACTTGGGATT GGCCTTGTTCTGCACATCATTATAATGACCACTGCATGCCTGGTTGAGAGGAAGAGACTCGGTGTTGCAAGAGAAAAAAA CCTCTTAGGCCAGCATGACACAATTCCTCTTACAATTTTCATTCTCCTCCCTCAGTTTGGTCTGACAGGGATTGCTGATA CCTTTGTGGATGTTGCTAAGCTAGAATTCTTCTATGATCAAGCACCAGAAGCCATGAAAAGTCTTGGAACATCATATTTC ACAACCACCCAGAGCATTGGGAGTTTTTTCAGTACTTTTCTTTTATCAACTGTGGCTGATCTCACCCGCAAACATGGCCA TAAGGGTTGGATTTTGGATAATCTAAACGTCTCCCATATAGATTACTATTATGCATTCTTGGCCATGCTGAGCACTATCA ACTTCCTTTGCTTTGTTATTGTTGCCAAGTTCTTTGTCTATAATTATGATGTAACACAAACCAAAATGGACTTGGAGTTG GAAATGAACACTGCTTCAGCTTAGAACAAGACTAGAATAAGCCAAGGTACCTCCACAACC
CDS sequence (LotjaGi1g1v0705600.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATTGAAAGGATGGCATACTATGGGATAGCATCAAACCTAGTGCTGTACCTGACAAAGAAGCTCCATGAGGGTACTGT AAAATCTTCAAACCATGTTACCAACTGGGTTGGCACAGTGTGGATTATGCCAGCTGCAGGGGCTTATATAGCTGACGCCT ATCTTGGCAGATATTGGACCTTTGTAACAGCATCTGGCATTTACCTTCTGGGAATGTGTTTGCTGACACTAGCAGTATCA CTACCAGCTCTAAGACCACCACCATGTCCTCCAGGGGTAGCAGACAAGGATTGCCAACAAGCATCATCATTGCAAATGGG TATTTTCTTCTTTGCCTTGTACATCATTGCAGCAGGCACAGGGGGAACCAAGCCCAACATTTCCACCATGGGAGCAGACC AATTTGATGACTTTGAGCCCAAAGAAAGACACCATAAGCTTTCTTTCTACAATTGGTGGGTGTTTTATATCTTAATTGGA ACCATTTCTGCCCAAACTGCATTAGTTTACATACAAGACAATGTGGGCTTTGCACTTGGATATGGAATTCCAACCATTGG ACTTGCCATTTCAATATTGGTGTTTCTGTTAGGAACTCCACTTTATAGGCATAGATTACCCTCAGGAAGCCCTTTAACTA GGATGGTTCAGGTCATTGTGGCTGCAATGAGCAAGTGGAAGGTAAAAGTCCCAGATGATCCAAAAGAGTTACATGAAGTG AGCACAGAAGAGTATGCAAGTAAAGGCAGAAACATAATTGATCACAGCTCTTCAATGAAATTCCTTGACAAGGCAGCAAC AAAGACTGGTCAAACTTCACCATGGATGCTTTGTACTGTGACCCAAGTTGAGGAAACCAAGCAAATGATGAAAATGATTC CAATTCTAATAACTACATGTATCCCAAGCACCATCATAGCTCAAACCACCACACTCTTCATTAGGCAAGGCACTACTCTA GACCGGAGCATGGGACCTCATTTTGAAATACCTCCTGCATGTCTTACAGCATTTATAAACATCTTCATGCTGATAAGCGT TGTTATCTATGACCGTGTTTTTGTTCCTGCGATCCGGCGCTACACAAAGAACCCCAGAGGGATCACAATGCTGCAGAGAC TTGGGATTGGCCTTGTTCTGCACATCATTATAATGACCACTGCATGCCTGGTTGAGAGGAAGAGACTCGGTGTTGCAAGA GAAAAAAACCTCTTAGGCCAGCATGACACAATTCCTCTTACAATTTTCATTCTCCTCCCTCAGTTTGGTCTGACAGGGAT TGCTGATACCTTTGTGGATGTTGCTAAGCTAGAATTCTTCTATGATCAAGCACCAGAAGCCATGAAAAGTCTTGGAACAT CATATTTCACAACCACCCAGAGCATTGGGAGTTTTTTCAGTACTTTTCTTTTATCAACTGTGGCTGATCTCACCCGCAAA CATGGCCATAAGGGTTGGATTTTGGATAATCTAAACGTCTCCCATATAGATTACTATTATGCATTCTTGGCCATGCTGAG CACTATCAACTTCCTTTGCTTTGTTATTGTTGCCAAGTTCTTTGTCTATAATTATGATGTAACACAAACCAAAATGGACT TGGAGTTGGAAATGAACACTGCTTCAGCTTAG
Protein sequence (LotjaGi1g1v0705600.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MIERMAYYGIASNLVLYLTKKLHEGTVKSSNHVTNWVGTVWIMPAAGAYIADAYLGRYWTFVTASGIYLLGMCLLTLAVS LPALRPPPCPPGVADKDCQQASSLQMGIFFFALYIIAAGTGGTKPNISTMGADQFDDFEPKERHHKLSFYNWWVFYILIG TISAQTALVYIQDNVGFALGYGIPTIGLAISILVFLLGTPLYRHRLPSGSPLTRMVQVIVAAMSKWKVKVPDDPKELHEV STEEYASKGRNIIDHSSSMKFLDKAATKTGQTSPWMLCTVTQVEETKQMMKMIPILITTCIPSTIIAQTTTLFIRQGTTL DRSMGPHFEIPPACLTAFINIFMLISVVIYDRVFVPAIRRYTKNPRGITMLQRLGIGLVLHIIIMTTACLVERKRLGVAR EKNLLGQHDTIPLTIFILLPQFGLTGIADTFVDVAKLEFFYDQAPEAMKSLGTSYFTTTQSIGSFFSTFLLSTVADLTRK HGHKGWILDNLNVSHIDYYYAFLAMLSTINFLCFVIVAKFFVYNYDVTQTKMDLELEMNTASA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 530 | 530 | 0.0 | – | |
| Gene3D | 1 | 530 | 530 | 1.7E-186 | – | |
| Phobius | 1 | 32 | 32 | - | – | |
| PANTHER | 1 | 530 | 530 | 0.0 | ||
| CDD | 1 | 523 | 523 | 0.0 | – | |
| SUPERFAMILY | 8 | 520 | 513 | 1.96E-14 | ||
| Phobius | 33 | 51 | 19 | - | – | |
| Phobius | 52 | 57 | 6 | - | – | |
| Pfam | 58 | 487 | 430 | 1.9E-104 | ||
| Phobius | 58 | 84 | 27 | - | – | |
| TMHMM | 59 | 81 | 23 | - | – | |
| Phobius | 85 | 103 | 19 | - | – | |
| TMHMM | 101 | 123 | 23 | - | – | |
| Phobius | 104 | 122 | 19 | - | – | |
| Phobius | 123 | 149 | 27 | - | – | |
| TMHMM | 149 | 171 | 23 | - | – | |
| Phobius | 150 | 171 | 22 | - | – | |
| Phobius | 172 | 176 | 5 | - | – | |
| TMHMM | 175 | 197 | 23 | - | – | |
| Phobius | 177 | 198 | 22 | - | – | |
| Phobius | 199 | 294 | 96 | - | – | |
| TMHMM | 293 | 315 | 23 | - | – | |
| Phobius | 295 | 314 | 20 | - | – | |
| Phobius | 315 | 329 | 15 | - | – | |
| TMHMM | 328 | 350 | 23 | - | – | |
| Phobius | 330 | 350 | 21 | - | – | |
| Phobius | 351 | 370 | 20 | - | – | |
| TMHMM | 371 | 390 | 20 | - | – | |
| Phobius | 371 | 391 | 21 | - | – | |
| Phobius | 392 | 410 | 19 | - | – | |
| TMHMM | 410 | 432 | 23 | - | – | |
| Phobius | 411 | 432 | 22 | - | – | |
| Phobius | 433 | 452 | 20 | - | – | |
| TMHMM | 453 | 475 | 23 | - | – | |
| Phobius | 453 | 478 | 26 | - | – | |
| Phobius | 479 | 497 | 19 | - | – | |
| Phobius | 498 | 522 | 25 | - | – | |
| TMHMM | 501 | 523 | 23 | - | – | |
| Phobius | 523 | 543 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi1g1v0705600.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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