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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0709800 |
| Transcript ID | LotjaGi1g1v0709800.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Phosphate transporter; TAIR: AT3G54700.1 phosphate transporter 1;7; Swiss-Prot: sp|Q494P0|PHT17_ARATH Probable inorganic phosphate transporter 1-7; TrEMBL-Plants: tr|Q1T6Z6|Q1T6Z6_LOTJA Phosphate transporter; Found in the gene: LotjaGi1g1v0709800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:127789754..127791373) extracted from Lotus japonicus Gifu genome v1.2.
ATGGCCAAGGAACAAATTCAGGTGCTAAATGCGCTTGATGTGGCGAAAACACAATGGTACCATTTCACTGCAATTGTAAT TGCTGGAATGGGCTTCTTCACTGATGCATATGATCTATTCTGCATATCCCTTGTCACCAAGTTGCTCGGTCGCATTTACT ACCACGTTGATGGCGCTGCGAAGCCCGGAACATTGCCTCCAAATGTATCAGCTGCTGTAAATGGAGTAGCTTTCTGCGGT ACACTTTCAGGACAGCTTTTCTTTGGCTGGCTTGGTGACAAATTGGGCAGAAAAAAAGTCTATGGCATGACCCTCATGAT GATGGTCATATGCTCTATTGGTTCCGGCCTTTCGTTCGGACATAGTCCAAAATCTGTGATGGCAACACTTTGCTTCTTCA GGTTCTGGCTTGGTTTTGGAATTGGTGGAGACTACCCCCTTTCTGCTACCATTATGTCTGAGTATTCGAATAAGAAGACT CGCGGCGCCTTCATCGCTGCGGTCTTTGCTATGCAGGGTTTTGGAATTCTTGGAGGTGGTATATTTGCAATCATAATTTC TGCTGCATTCAAGGCCAAGTTTGATGCTCCGCCTTATGAGGTTGATCCGGTTGGTTCAACTGTTCCTCAAGCTGACTATA TTTGGAGGATAATTGTGATGGTTGGAGCACTCCCAGCTGCATTGACTTACTACTGGAGGATGAAGATGCCGGAAACCGCT CGCTATACTGCTCTAGTTGCCAAGAACACAGAACAGGCTGCAAAGGATATGTCTAAGGTTCTGCAGGTTGAGATTCAAGC TGAGCCAAAAGGTGACCAAGCACAGGCCAATACATTTGCCTTGTTCTCAAAGGAGTTCATGCGCCGCCACGGATTGCATC TTCTCGGCACAGCAAGCACATGGTTCTTGCTTGATATTGCATTTTACAGCCAAAATCTCTTCCAAAAAGACATCTTCAGT GCAATTGGTTGGATTCCTCCTGCAAAAACCATGAATGCTCTTGAGGAAGTTTACAGAATTGCAAGAGCTCAGACGCTTAT CGCTCTCTGCAGTACTGTCCCTGGCTACTGGTTTACAGTGGCTCTCATAGACAGGATTGGAAGATTTGCTATTCAATTGA TGGGGTTCTTCTTCATGACTGTTTTTATGTTCGCTCTTGCCATTCCTTATGACCACTGGACTCATAAGGAGAACAGAATA GGATTCGTGGTGATATATTCCTTGACTTTCTTCTTCGCGAATTTCGGGCCTAATGCCACCACATTCGTCGTGCCGGCCGA GATTTTCCCGGCTAGATTCCGGTCCACTTGCCACGGAATTTCATCAGCGGCCGGGAAGCTCGGGGCTATAGTCGGAGCAT TCGGGTTCTTGTACCTGGCACAGAACAAGGACAAGAGCAAAGCAGATGCAGGGTACCCTGCAGGTATTGGTGTGAAGAAC TCACTGCTTTTGTTAGGTGTGGTCAACATTTTAGGCTTCTTTTGTACTTTCTTGGTGCCTGAGGCAAAGGGAAAATCTTT GGAGGAAATGTCAGGTGAGAATGAAGAGGAAGGTGAAAATGGAACCAAAGAAGAGTCAGAGCCACATTCTTACAGCACCA GAACAGTTCCATATGTTTAG
CDS sequence (LotjaGi1g1v0709800.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCCAAGGAACAAATTCAGGTGCTAAATGCGCTTGATGTGGCGAAAACACAATGGTACCATTTCACTGCAATTGTAAT TGCTGGAATGGGCTTCTTCACTGATGCATATGATCTATTCTGCATATCCCTTGTCACCAAGTTGCTCGGTCGCATTTACT ACCACGTTGATGGCGCTGCGAAGCCCGGAACATTGCCTCCAAATGTATCAGCTGCTGTAAATGGAGTAGCTTTCTGCGGT ACACTTTCAGGACAGCTTTTCTTTGGCTGGCTTGGTGACAAATTGGGCAGAAAAAAAGTCTATGGCATGACCCTCATGAT GATGGTCATATGCTCTATTGGTTCCGGCCTTTCGTTCGGACATAGTCCAAAATCTGTGATGGCAACACTTTGCTTCTTCA GGTTCTGGCTTGGTTTTGGAATATTTGCAATCATAATTTCTGCTGCATTCAAGGCCAAGTTTGATGCTCCGCCTTATGAG GTTGATCCGGTTGGTTCAACTGTTCCTCAAGCTGACTATATTTGGAGGATAATTGTGATGGTTGGAGCACTCCCAGCTGC ATTGACTTACTACTGGAGGATGAAGATGCCGGAAACCGCTCGCTATACTGCTCTAGTTGCCAAGAACACAGAACAGGCTG CAAAGGATATGTCTAAGGTTCTGCAGGTTGAGATTCAAGCTGAGCCAAAAGGTGACCAAGCACAGGCCAATACATTTGCC TTGTTCTCAAAGGAGTTCATGCGCCGCCACGGATTGCATCTTCTCGGCACAGCAAGCACATGGTTCTTGCTTGATATTGC ATTTTACAGCCAAAATCTCTTCCAAAAAGACATCTTCAGTGCAATTGGTTGGATTCCTCCTGCAAAAACCATGAATGCTC TTGAGGAAGTTTACAGAATTGCAAGAGCTCAGACGCTTATCGCTCTCTGCAGTACTGTCCCTGGCTACTGGTTTACAGTG GCTCTCATAGACAGGATTGGAAGATTTGCTATTCAATTGATGGGGTTCTTCTTCATGACTGTTTTTATGTTCGCTCTTGC CATTCCTTATGACCACTGGACTCATAAGGAGAACAGAATAGGATTCGTGGTGATATATTCCTTGACTTTCTTCTTCGCGA ATTTCGGGCCTAATGCCACCACATTCGTCGTGCCGGCCGAGATTTTCCCGGCTAGATTCCGGTCCACTTGCCACGGAATT TCATCAGCGGCCGGGAAGCTCGGGGCTATAGTCGGAGCATTCGGGTTCTTGTACCTGGCACAGAACAAGGACAAGAGCAA AGCAGATGCAGGGTACCCTGCAGGTATTGGTGTGAAGAACTCACTGCTTTTGTTAGGTGTGGTCAACATTTTAGGCTTCT TTTGTACTTTCTTGGTGCCTGAGGCAAAGGGAAAATCTTTGGAGGAAATGTCAGGTGAGAATGAAGAGGAAGGTGAAAAT GGAACCAAAGAAGAGTCAGAGCCACATTCTTACAGCACCAGAACAGTTCCATATGTTTAG
Protein sequence (LotjaGi1g1v0709800.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAKEQIQVLNALDVAKTQWYHFTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAAKPGTLPPNVSAAVNGVAFCG TLSGQLFFGWLGDKLGRKKVYGMTLMMMVICSIGSGLSFGHSPKSVMATLCFFRFWLGFGIFAIIISAAFKAKFDAPPYE VDPVGSTVPQADYIWRIIVMVGALPAALTYYWRMKMPETARYTALVAKNTEQAAKDMSKVLQVEIQAEPKGDQAQANTFA LFSKEFMRRHGLHLLGTASTWFLLDIAFYSQNLFQKDIFSAIGWIPPAKTMNALEEVYRIARAQTLIALCSTVPGYWFTV ALIDRIGRFAIQLMGFFFMTVFMFALAIPYDHWTHKENRIGFVVIYSLTFFFANFGPNATTFVVPAEIFPARFRSTCHGI SSAAGKLGAIVGAFGFLYLAQNKDKSKADAGYPAGIGVKNSLLLLGVVNILGFFCTFLVPEAKGKSLEEMSGENEEEGEN GTKEESEPHSYSTRTVPYV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 18 | 18 | - | – | |
| PANTHER | 5 | 141 | 137 | 3.7E-268 | – | |
| PANTHER | 5 | 141 | 137 | 3.7E-268 | – | |
| SUPERFAMILY | 12 | 471 | 460 | 5.1E-49 | ||
| Phobius | 19 | 45 | 27 | - | – | |
| TMHMM | 20 | 42 | 23 | - | – | |
| ProSiteProfiles | 24 | 464 | 441 | 15.525 | ||
| Pfam | 25 | 141 | 117 | 1.1E-9 | ||
| CDD | 25 | 463 | 439 | 8.30267E-162 | – | |
| Phobius | 46 | 64 | 19 | - | – | |
| Phobius | 65 | 88 | 24 | - | – | |
| TMHMM | 69 | 91 | 23 | - | – | |
| Phobius | 89 | 99 | 11 | - | – | |
| Phobius | 100 | 119 | 20 | - | – | |
| TMHMM | 101 | 123 | 23 | - | – | |
| Phobius | 120 | 130 | 11 | - | – | |
| TMHMM | 130 | 149 | 20 | - | – | |
| Phobius | 131 | 150 | 20 | - | – | |
| PANTHER | 140 | 486 | 347 | 3.7E-268 | – | |
| PANTHER | 140 | 486 | 347 | 3.7E-268 | – | |
| Phobius | 151 | 172 | 22 | - | – | |
| Pfam | 172 | 471 | 300 | 4.9E-27 | ||
| TMHMM | 173 | 192 | 20 | - | – | |
| Phobius | 173 | 192 | 20 | - | – | |
| Phobius | 193 | 305 | 113 | - | – | |
| TMHMM | 252 | 269 | 18 | - | – | |
| Phobius | 306 | 323 | 18 | - | – | |
| Phobius | 324 | 328 | 5 | - | – | |
| TMHMM | 326 | 348 | 23 | - | – | |
| Phobius | 329 | 348 | 20 | - | – | |
| Phobius | 349 | 359 | 11 | - | – | |
| Phobius | 360 | 379 | 20 | - | – | |
| TMHMM | 361 | 383 | 23 | - | – | |
| Phobius | 380 | 398 | 19 | - | – | |
| TMHMM | 398 | 420 | 23 | - | – | |
| Phobius | 399 | 420 | 22 | - | – | |
| Phobius | 421 | 440 | 20 | - | – | |
| TMHMM | 441 | 460 | 20 | - | – | |
| Phobius | 441 | 460 | 20 | - | – | |
| Phobius | 461 | 499 | 39 | - | – | |
| MobiDBLite | 466 | 499 | 34 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi1g1v0709800.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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