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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0710500 |
| Transcript ID | LotjaGi1g1v0710500.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | BHLH transcription factor-like protein; TAIR: AT1G06150.2 basic helix loop helix (bHLH) DNA-binding superfamily protein; Swiss-Prot: sp|P0C7P8|LHWL1_ARATH Transcription factor EMB1444; TrEMBL-Plants: tr|A0A151TUG4|A0A151TUG4_CAJCA Putative basic helix-loop-helix protein family; Found in the gene: LotjaGi1g1v0710500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:127885278..127892633) extracted from Lotus japonicus Gifu genome v1.2.
GTGTCATTTCCCTTTGGGGCTTTTGCCCTTTGTCTTCTTCTATTATTTAAGTAACACCTTGCTAAAATGCGCACAAACTA TGCTTATGGTGCGTATGATTAGACAAATCAAACGGTCCATATTCACCAAGTGAAAAAGCTTGATGAAACATAGTGCCAAT GTAACTCTCTAATAAAGAGCAACCACACTCTCTTCTCTTCCACCATTGATTCACATTCACACACTCTTCTCAGCAAACTG CTTCTCTCTCTCTCCCTCCCTCTCTCTCTCTCTCTCTCTAAACAAACTTTGTTTTTGGTTCAATTTTCATTGTTTTTGAG TCAATAAAGCTCTGAACTTTGAAGTCTTCTTTGAAATCTTAACCAACCCCATTTTCAGTTTTGCTTCTTTGTTTGCAAAG TTCTTTGCTTTTCATCCAATCGCTCTCCAATTCCACTCTTCCACATGTCTTCTGATATAAGCTAAATTACATGCATGTTA CTCTGATGGCTAATGCTGGAGCTTCTGTTTACAGTGTAATTGAGGGTTTGGTTCTGTTTCAGTGATTGTGAAGCAAAGCT TGAAGCTTTGGTTGGTGGGGTGGTGGGAATTTGCGGTGTTTGTGATGGGTAAGGATCGGCTGCTACTGGCAACAGTTGGA CCGCCATTAAAACGGCGAGCAGGGTTGCGGAGGAAGCAGGCTGGAAGAGGCTCCTACAGAGGGAGCTAGGGTGAGGGTGA TTTGTTGTGTGTGTGATTGGAGGGGGGTTTTTTGTTGTTTTTTGACGACCCTTTTTGTCAAGGGTGCCTTTGAGGTGTTG AAGTTTCTAACTTTTTGAAGAGGAACAAGATGGGTAGTACTAACTTGCACCAAGTACTTAGAAGCCTCTGTTTCAATTCT GATTGGAACTATGCCATCTTTTGGAAGCTCAAACATCGAGCTAGAATGTATGTTACTACTTCTGATATTATTGTTTACTT CTTGTTTTTAGTCCTACTTGCATATTGCATCTTTACTTTGGTGTATCTTTGATTTTATCTATATTCTATACCATAATTTT GGATGTTGACAACTCAGAACATGTTAATGAGGTGAAGTGTAGTTTGGCATGATTCCATCCTTCAGTCTGAAGTTTGACTT GGCATAATTGGTTTTATTTTTATACATAAGTTTTTACTAATATTATTCATATTATATAATGATTTTTATAGTAAAGATAT TCCTTGATATTCTTCCATGTGTTTTGTCCTTCCACGTTTGGTGATTCTAGTTTAGAATAACTTTTTTTTTAATCAACTAA GATGGGAATGTGTTGTGTGTCTAGATTCTAGAATCCATAATTTTGAGGAGTTTTTACCCTTTGATGTTGTCTATTTTGGC TTAAGGAAAACTATTGTATCTTGTTCGGTGAATTACGATCTTCTGTATTCAAAGTGCTTTATGTTACTTTCATTTGAATG GGATAAGGGTAGCATTTGTGTTTGGTCATTTTGCATTTATGTGATCGGCAGTAAAGATAAAACATTACTGTTTAATGATA TAATTTTGCACATTCATTTCTTCATTACAGGTGCACTTAGCACAAATAGTTAAAGTACATGATGTGTTACCTTAAAGTTT CTCGGTGTGGCATTTGTTTGCAGGATGTTGACATGGGAGGATGCTTACTATGACAATCCTAACAATGATGATTCAGAAAA TAAGTACAGTCAGAAGACCTTGGAACAGATTGGTGGTGGGAAATTTTCACACGACGCTCTAGGATTAGCTCTGGCAAAGA TGTCATATCATGCATATTCATTAGGGGAAGGGTATGACTAATCAAATGTAAATTGGTGCTACTTAAGATTTGATCTTCTT TTATGTAGCTCTTATCCTAAGATCCTTTCTTTACAGTATTGTCGGACAGGTAGCTATTACTGGAAAGCATCGGTGGATAT GTGCGGATAATCAAGTTCCAGGTTCTGGCTTGTCTTTTGAGGTGAGAACTCTTGTTATTCAGTGATGTGACTTAGGATCT CTTACCCTTGGAAAAATTGAAGGTCTCTAATTGGTATCAGACAAATAACATGTCATTTTCTAATCCATCTTCCAATCATT CTCATTCCTCTCCCCTTTCTGGTTTCATTTTCAGTTTGCTGATGGATGGCAGTCTCAGTTTTCTGCTGGAATTAGGGTAA GTTAACTGCTTTATTATTCTTTTCACAAGTCACAACTCTACAATATTCATGTCCATCAAAATTTGTATAAGTGAACTTTC TATTTCTAACCAGACATTAGAATTGTCTCACATTAATAATTCTAAGGATAAAGGGCAATTTAATTTGTGGTTAATATGAT AATAGGCTCAATAAGACAAACTTTTGAGCCGCTGCAGCACTCTGCCTCATTATTCTTAATTCACTAGATTCAACCAATAT AAAGCAATCTTACTGTGTTGCATTCGGTTCCTGAGTACTAAACGTTAGAAAACTCGTCTTTGAGACAATGATTTCTTAGT CTGCATCCTTGTACTTTGTATTCTATGCATTAAAATTTTTCATTAATACAGCTTTTACTTTTCTGTGCAGACAATCGTTG CTGTAGCTGTAGTCCCACTTGGTGTTGTTCAACTTGGCTCTCTAAATAAAGTAAGATGAGTACTTTTTTATCTTTATTTT CTTTGCTTTAGAACCTATTGCTAGCTAATGTGGTTTCTGATAGTGTTCAAGAAGACATCTTTCATCTCTTTATGATGCTC TGTATAACAGACTTTGTATTCGAGATTTTGAAATTTATTTTCACTCTTTCAGTCTTTTGCTTTGATCTATGAACTATTAA GATATGTGTATATAATTTAGTGAAGAACACAGATAAATGAGTGAGACTGTCAACAACCAATTCCTAGTTTTGTCAATTGA TAACATAGGCTTAATGTAGTTAAGTTAGCTACAAGTATACTCAATTATAACTTATTAAACAACTAAAACCAGAGGATTTG GCATGAAGATTAAATATTAGGACCTTTCTTTTCAATGCTGATTTTACGGGTAACAGGGTCACATATTCACCTGAGGCTAC TATTGAATTATCTGCATAATGCCACCTTACCAAGTATGAAGCATATTTAGGGTGTGGAGGAGGGGGAATTGTTGGGGAAA TGCTGATCTAATAATTAGAGTTTACATACCACTAAACCCTTGCTTTTGGTGTCTTTTTGCCTTATTCCTTCTATGAATTG TTTGCCTAAATTGGCAATAAATAGATTACTTAATCTATAAAAAGCTAGTTAGTTTTCATTATGGGCTTGTGCCTATTTTC TTCTCTTTCTCTCTGAAATGCCTTCCTGAGCTTAATAAGCAATGTTTTCTTCAGAAAATTTGTTAGGTCTTTTTCTTGAT TTCCCTGTATAATTTAGATGAATTTCCCCCCTTGTCATGGGCTGTTTTGTGATTTTTATGAATTGCAGAATATTTCCTGG ATATAAATGTACATTGAAGCCCATTTATTATTGAAATATTTAATAACTTATTTTGCCTTTGTCATCCCGGGTTGCAGGTG ATTGAAGACATGGGGACTGTAACTCATATAAGAAATCAGTTTTTGTCTACTCAAGACTACTCAGTAGGCCATGTTCCTAG TCAAATGCACACTAGCTTGAAGAGTTCTTCGTCTCAGGTAAGCTTCTACTTTTACCTCTCTATATGCATGTCTTTGCATG GTGCATGAGTGGGTAGGGGGTTTGTGTGACTGTTGGCATGGACATTTTGCCATTTACTATGTCATAATTATTTTTAACCA AGATGCGTTGAACATTATCATGATGTTTATATTTCTTGCTTTTTTCAGCCAGAAGTATTGAAGGAAAATTTGTCTTCAGA TATTATGCATGTTTGCTTACATGATACAGAGAAAACCACGAATAGTGAAAAAGTGGATGTTTTAACGCCCCTTCAATCTT CAGAGAGGAACTATGCACCTCATTCTGCATATGAAAAACTGACTGATATGGCCACGCTTGAGGGGCCTGAATTTCGTAGT GATGAAACCTTTTTGCTTCCGACAATTTCCAATATGATTAATGTGGAGCATCAGGAATTTGAAGAGATGCGACATCTAAA TGAGAGGCGGTGTCGAGGGGACAGTAGTGGCTGCAAAAATATGAGTTTGGAATCAGAAAATGCCACATCAGTTTTAAACA ATTCTGTTATAAATAACACTAGCTTCAATGCTTTAATACACTCATCAGAAAAAGTCAGTGCTGATTCTGCATGCTTTCCT TCAGTTTTTCTTGATACAGTTGTTTGTGAAAGTGATAAGTTGCTTCGTGTGGATGCTGGCCATAATGAAATGTTGAGTTT CACCGCACTTTCTGATGTTAACTCCCAAAAACATACCAAAAAGTCAGAATGTCAAACTGAGCCTTGTGACAAGGATACCT CGTACTTTCAACCCGAGCCTTGTTGCAAGGATACCTCGTACATGATGTCAAAGTTCCCTGCTGGGTGTGAACTACATGAA GCACTTGGACCAGCTTTTTTGAAAGGGAGTAAATGTTTTGATTGGCTGGCTCAGGTTAATCAGGACATGAAAACTGTTGA TATGCCAGATGAGATTAGCACGAGTCAATTGACTTCTGAATCTCGTCCAGAACATCTTTTGGAAGCAATGGTGGCCAACA TTAGCCATAGTAATAATGATAATAATGGTGAATTATCATTTTGTACATCAATGCAATCCGCAATGACTTCTGGAAAAAAT CCTGAAGCTTCTCTTCATAATGTGCATAGTGTTAATTCAAAAGCATATTCAATAGATCATCCCTCTCTCTTAAGAGAGGA CAAGCACCATTCTTTGAGTTCTTCTACATGTCCCGGTTCATATAGCGAACAGTTTGAAAGGTCCTCTGAACCTTCTAAGA ACAGCAAGAAGAGGGCTAGGCCGGGCGAAAGTTGTAGGCCTCGGCCAAGAGACAGGCAACTGATCCAAGATCGTATTAAG GATTTGAGAGAGCTGGTGCCTAATGGAGCAAAGGTATCTTGCTGTAATGTTTCTACTTTCCGTTTGTGGGTTTTGAGTGA TGGTTATGGTTGTGGTTCACGTGGCTAAACATTTTATTGTAACTTCAACAGTGCAGTATTGATTCACTACTGGAGCGCGC AATAAAGCACATGCTATTTCTCCAAAGCGTAACCAAGCACGCTGACAAGCTAACTAAATTCGACGATACTAAATCAAAGG TAATGTTCAAGGGGGTTTGAGAAATCTACCTTGTGGTCCACAGTCTATAAAGAAGCTAATTGACCATCTCTGATTAAGTA GGGACTGATATTTGAAATGTTAAGATATGCATATGTATGAGATTATGGTTCACTATGAATTAATTGGTTTCTCACTCTGG TTTGATACTGAAAAACAAAGGCATTTACTTCTCCTAAACCTTTGACTATCTTTTAGGGCATACTTTGATTGGATAAGATT TTATTTATCTAATTGCTACTTAGGATACAAGTTTTTGAGTTGAAATGATCCATTCAGACAACTGTTGATTGCCCCCTTCC ACATTTTCCGCATGTGGAATTATCTTCCTTGTTTAACAACAACTACAACAACAAAAGCTTTATCCCACTAAGTGTGGTCA GCTATATGGATCTTCCTTGTTTAACACTACTATAATTTTGCAGTTGCATCGCATGGAAACAGACGTTATTGGAACCTCTA CTTATGAGCAGGGTTCAAGTTGGGCAATGGAGGTTGGGGGTCCTTTGAAAGTTCATTCAATATTGGTGGAGAATCTTAGC AAGGATGGACAGATGATTGTTGAGGTGTGTATGACTTGAAAATTTCAATTTGATTATTATATAACAATGATTGATTAAAA TTGTATCACAAGAGAAAAACTCATGATGAGAAACGGAAGAGGTTAGAAGAAAGGTTGTTGGAGGTCATAATCAGCTACTT AGTATGTTCACTATTATAACTCTGGCTTTTTCTGTAGATGCTTTGTGAGGAGTGCAGCCATTTTCTTGAAATAGCAGACG TGATAAGAAGCTTGGGCCTTACAGTTTTGAAGGGTGCAACAAAAGCTCATGATGAGAAGATATTGTTATGCTTTGTTGTT GAGGTAGGATCAGAACTCAAAACTAAGATTTGAAACTACTGTAGTGTTTTCTTATTTATAGGACTGAAGAACTGACCTAA AATTGCTGTGAACTTTGTCTATAACTTCATTACAGTATATTGCAAAAATTATAGCATACCAATTATTGTGAATTGATTTG AAGTTGAAAACATCAAATATGTACTGAATGTTAGGCATGATATAGCATATATGATTAGTACTGAAGTAAAATCTGAACAG TTTATGAGCCATGCACTCGTGCTTGTAAGTTCTTTATATTCATTCATTCATGAAATGTCATTGATGAGAAAATCTGGTGT ATCACAGGGCCAAAACAACAGAAATGTACACAGACTGGATATCTTGTGGCCGCTTGTTCAGATACTGCAATCCAAGAGCA CAATGCATGCACAATAACTGGTTGATTATTGGCCTGTCATTGCCCATTGTAACTCATTCTTAATATCCGAGATGATGCTC AGAGTCTTCTACCTTTACATTGTGTCAAGACTCAGTTTGTTGTTTTCTTATGTTTCTGGGTTGAACATGTGATTGTCATT TGTTTATATATTTTGAATTTGATTGAAAATGAACACAATATGTGGTGGACGATATATACGTATTAAAGGTTTCCTTGTTT CTCCAAGACTTTGCATCTAAGCATCCAATAACTTTTTAGGTCACAAGATGGGTTACTAGGCATATTACAAGTTTCATTTT TTACCACCAAAGCGTTAAATTTGGATCCCTTACCTTGGAAAACAACCAAGTATTGAGAAAATCTATTTCCTACCTTCGAT TTTAAAACACTCTGGCGTGAGATGTGATAAGTTAGGATCGATTAATTTCTCAACACACATATGTATATATTACATTGGCA AAGATCCATGCTAAAAGTGACATGTCATTAACACTTACTAATACTGATACATGGAGATATCAAACTGTCTAAGTACCTCA TCAGCTCAATGAAAATCTTAGGTAGCATCGTAACTTGGTTGTTTACATGATGAAAATTCATAATATCAACCAAGAATGTG CCACACAGTCAAATTTTTTATGAACAATCAAATTTGAAAAAAAAAAACGTCATGAACAAACTAATGCACATACACTATAT TTGAAGAAGGATGAATGTCATGAACTTCATATTTTTAATCATATTTTTAACATACATATACCCACAGCACATATTAAGTG TTTACGTCTATATGGATTAGGATTAGGGTCCTAACAAAATCTTTAGCAAGGTCTTGGAGAAACAAGAAAAACTTCA
CDS sequence (LotjaGi1g1v0710500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGTAGTACTAACTTGCACCAAGTACTTAGAAGCCTCTGTTTCAATTCTGATTGGAACTATGCCATCTTTTGGAAGCT CAAACATCGAGCTAGAATGATGTTGACATGGGAGGATGCTTACTATGACAATCCTAACAATGATGATTCAGAAAATAAGT ACAGTCAGAAGACCTTGGAACAGATTGGTGGTGGGAAATTTTCACACGACGCTCTAGGATTAGCTCTGGCAAAGATGTCA TATCATGCATATTCATTAGGGGAAGGTATTGTCGGACAGGTAGCTATTACTGGAAAGCATCGGTGGATATGTGCGGATAA TCAAGTTCCAGGTTCTGGCTTGTCTTTTGAGTTTGCTGATGGATGGCAGTCTCAGTTTTCTGCTGGAATTAGGACAATCG TTGCTGTAGCTGTAGTCCCACTTGGTGTTGTTCAACTTGGCTCTCTAAATAAAGTGATTGAAGACATGGGGACTGTAACT CATATAAGAAATCAGTTTTTGTCTACTCAAGACTACTCAGTAGGCCATGTTCCTAGTCAAATGCACACTAGCTTGAAGAG TTCTTCGTCTCAGCCAGAAGTATTGAAGGAAAATTTGTCTTCAGATATTATGCATGTTTGCTTACATGATACAGAGAAAA CCACGAATAGTGAAAAAGTGGATGTTTTAACGCCCCTTCAATCTTCAGAGAGGAACTATGCACCTCATTCTGCATATGAA AAACTGACTGATATGGCCACGCTTGAGGGGCCTGAATTTCGTAGTGATGAAACCTTTTTGCTTCCGACAATTTCCAATAT GATTAATGTGGAGCATCAGGAATTTGAAGAGATGCGACATCTAAATGAGAGGCGGTGTCGAGGGGACAGTAGTGGCTGCA AAAATATGAGTTTGGAATCAGAAAATGCCACATCAGTTTTAAACAATTCTGTTATAAATAACACTAGCTTCAATGCTTTA ATACACTCATCAGAAAAAGTCAGTGCTGATTCTGCATGCTTTCCTTCAGTTTTTCTTGATACAGTTGTTTGTGAAAGTGA TAAGTTGCTTCGTGTGGATGCTGGCCATAATGAAATGTTGAGTTTCACCGCACTTTCTGATGTTAACTCCCAAAAACATA CCAAAAAGTCAGAATGTCAAACTGAGCCTTGTGACAAGGATACCTCGTACTTTCAACCCGAGCCTTGTTGCAAGGATACC TCGTACATGATGTCAAAGTTCCCTGCTGGGTGTGAACTACATGAAGCACTTGGACCAGCTTTTTTGAAAGGGAGTAAATG TTTTGATTGGCTGGCTCAGGTTAATCAGGACATGAAAACTGTTGATATGCCAGATGAGATTAGCACGAGTCAATTGACTT CTGAATCTCGTCCAGAACATCTTTTGGAAGCAATGGTGGCCAACATTAGCCATAGTAATAATGATAATAATGGTGAATTA TCATTTTGTACATCAATGCAATCCGCAATGACTTCTGGAAAAAATCCTGAAGCTTCTCTTCATAATGTGCATAGTGTTAA TTCAAAAGCATATTCAATAGATCATCCCTCTCTCTTAAGAGAGGACAAGCACCATTCTTTGAGTTCTTCTACATGTCCCG GTTCATATAGCGAACAGTTTGAAAGGTCCTCTGAACCTTCTAAGAACAGCAAGAAGAGGGCTAGGCCGGGCGAAAGTTGT AGGCCTCGGCCAAGAGACAGGCAACTGATCCAAGATCGTATTAAGGATTTGAGAGAGCTGGTGCCTAATGGAGCAAAGTG CAGTATTGATTCACTACTGGAGCGCGCAATAAAGCACATGCTATTTCTCCAAAGCGTAACCAAGCACGCTGACAAGCTAA CTAAATTCGACGATACTAAATCAAAGTTGCATCGCATGGAAACAGACGTTATTGGAACCTCTACTTATGAGCAGGGTTCA AGTTGGGCAATGGAGGTTGGGGGTCCTTTGAAAGTTCATTCAATATTGGTGGAGAATCTTAGCAAGGATGGACAGATGAT TGTTGAGATGCTTTGTGAGGAGTGCAGCCATTTTCTTGAAATAGCAGACGTGATAAGAAGCTTGGGCCTTACAGTTTTGA AGGGTGCAACAAAAGCTCATGATGAGAAGATATTGTTATGCTTTGTTGTTGAGGGCCAAAACAACAGAAATGTACACAGA CTGGATATCTTGTGGCCGCTTGTTCAGATACTGCAATCCAAGAGCACAATGCATGCACAATAA
Protein sequence (LotjaGi1g1v0710500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGSTNLHQVLRSLCFNSDWNYAIFWKLKHRARMMLTWEDAYYDNPNNDDSENKYSQKTLEQIGGGKFSHDALGLALAKMS YHAYSLGEGIVGQVAITGKHRWICADNQVPGSGLSFEFADGWQSQFSAGIRTIVAVAVVPLGVVQLGSLNKVIEDMGTVT HIRNQFLSTQDYSVGHVPSQMHTSLKSSSSQPEVLKENLSSDIMHVCLHDTEKTTNSEKVDVLTPLQSSERNYAPHSAYE KLTDMATLEGPEFRSDETFLLPTISNMINVEHQEFEEMRHLNERRCRGDSSGCKNMSLESENATSVLNNSVINNTSFNAL IHSSEKVSADSACFPSVFLDTVVCESDKLLRVDAGHNEMLSFTALSDVNSQKHTKKSECQTEPCDKDTSYFQPEPCCKDT SYMMSKFPAGCELHEALGPAFLKGSKCFDWLAQVNQDMKTVDMPDEISTSQLTSESRPEHLLEAMVANISHSNNDNNGEL SFCTSMQSAMTSGKNPEASLHNVHSVNSKAYSIDHPSLLREDKHHSLSSSTCPGSYSEQFERSSEPSKNSKKRARPGESC RPRPRDRQLIQDRIKDLRELVPNGAKCSIDSLLERAIKHMLFLQSVTKHADKLTKFDDTKSKLHRMETDVIGTSTYEQGS SWAMEVGGPLKVHSILVENLSKDGQMIVEMLCEECSHFLEIADVIRSLGLTVLKGATKAHDEKILLCFVVEGQNNRNVHR LDILWPLVQILQSKSTMHAQ
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 4 | 390 | 387 | 0.0 | – | |
| PANTHER | 4 | 390 | 387 | 0.0 | – | |
| Pfam | 6 | 166 | 161 | 5.6E-35 | ||
| PANTHER | 389 | 738 | 350 | 0.0 | – | |
| PANTHER | 389 | 738 | 350 | 0.0 | – | |
| MobiDBLite | 522 | 567 | 46 | - | – | |
| MobiDBLite | 528 | 543 | 16 | - | – | |
| MobiDBLite | 544 | 567 | 24 | - | – | |
| ProSiteProfiles | 554 | 603 | 50 | 10.493 | ||
| SUPERFAMILY | 567 | 609 | 43 | 7.59E-5 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein dimerization activity | The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits. |
Expression pattern of LotjaGi1g1v0710500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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