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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0716000 |
| Transcript ID | LotjaGi1g1v0716000.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Kinase family protein; TAIR: AT3G04810.1 NIMA-related kinase 2; Swiss-Prot: sp|A2ZMH2|NEK2_ORYSI Serine/threonine-protein kinase Nek2; TrEMBL-Plants: tr|A0A151RU45|A0A151RU45_CAJCA Serine/threonine-protein kinase Nek2; Found in the gene: LotjaGi1g1v0716000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:128423214..128429458) extracted from Lotus japonicus Gifu genome v1.2.
GTGGTCTTCCAAACATGTATTTCGTCGTGGGTAAGACTAATGAGTAGATGGGCACAACAAAAAATGATCAATCCTTGAAA CTGAAGCTGACCCTTTTGCCTTTCTAGCTAGACCTGGAAATTGCAGGTTATGTCCATGAACAACTTAGAAGGAAGTTATA AACCCTAAGTCTATGTGTAATTGGTTTATCACACACTTGGTGCTCTTTATCACACTTTTTACTTATATCATGGTAGGTAG GTCTTTTTATGCTTCTTAAACAATTATGTGTTTAGTGTGACTATTTGAACTCTAGCTTTTATATTTTAGAAATGATGACT TTCTTAATTAGGGAAGTGAGTGTCTGTAAGAAAAGTGTCAAATGCTTTAACTGATCAAAGTTTTATTCTGTTTCTATGTC TGGATCTTATCTGCAGGAATCACGCGGAGCTTTGAGTTACCGTCAAAGTGTTAAATCCCCATAAACCTGTATCTGGTGGC ATCTGCAACTGAATTGCATTCTGGAGCTGAAAATTAACTTTTAATTTACTCTCTGGTATACTTTGTCAGGTAACATCACT ATCTGGATTTTGGTTTGCAAAGCATGTTGCTACCTAAAACATATGTGGCTAGGGATATCAAGAAAAGTGTGCATCATGTC GTTCTGATTACCATTTAATGTTTTTGTACATTGTCAACATATTTGTAAGAGTAATCAATTTTACACTGTGGGTGCGTGAG TGCGTCCGTTAATATCACTATGATGGGCTTAACGTTGCTAACATTTCCAGGAATGTTACTCTGTCATTGGTAGTAGGTGG TGAAGTGATTTTAGTCCAATGGAGCAGTATGAAGTTCTAGAGCAGATTGGCAAAGGTTCATTTGGTTCTGCTCTGCTTGT GAGGCACAAACACGAAAAGAAACTGTGAGGATTATTCCAATTTATGTTTTGAAATGTGATTTAAGATGTTTTATATCCTT TTGCCAGTAATTTTTCAATTGTGAACTTGTCTGTTTCACTATACTTATATGATGTATCTTATTTATTAATGTCTTAGGTA TGTTCTCAAGAAGATCCGCCTTGCTCGCCAAAGTGACAGAACCCGTCGGTCTGCCCACCAGGAGGTAATCCACTACTTTT ACTTCCCAATCTTCATTTGTTTGAGGAAAATTGAATTGAGTACTTCACTGGCTTACCTCTTTCTTTGGTTTATGGAAGAC AGTATGTTATGCTGTTGAAAATGGCACATTCGTTTTGTACATTTTCTATATCATATTTTGCCAGATCTTTCAACATGAAA ACTTGAAGTTGACCTTGGCGCCTAACTTTTGTTCATATCAATTTTACATTTAAATTTAAATTTATTTCTGCTGTGGTTTT ATATATTAAAATGCGAAGATGATATTCATGTAGTCTTTCCTATTATTAAGATTGTAAGATGCCTTATCGGTTCCTTGTTT TGTAGATGGAGCTTATATCTAAAGTTCGAAACCCATTTATTGTGGAGTACAAAGATTCCTGGGTAGAAAAGGTCAGTCAT GTTTTCAATCAGAAATTTCTAATTCGGTTTCTTTTCATGTTTTTTCTGCCTGTGCTGCTGCTTGAATTCTAAGAGTGATG GGAGTCTAATTTTTTGTTTTATGTTTGGGCAAGAGTGACTTACTGTTCAAATTTGTTTCTAATTCTGTTTTTGAGTGCTT ATTCCAATGGAGTTCTTAACATAAGAACCTCTTTTGTAACCCATCTTGTAGGTTTATAATCTTGATTTATTTATGATACT GAAATTAACAAGCTGGTACCTTCACTTCCAGGGTTGTTTTGTATGTATCATTGTCGGCTATTGTGAAAGAGGAGATCTGT AAGTCCTCATTCACACTGACTTCAAGTATTTGACGAAGTCAGAACTTTTATCATGACATTGTTATGTTTTACTTGTCAAT TATGCAGTTTTTTAATAATTTGTTTCTGTTGTATAGGGCTGACGCTATAAAAAAGGCTAATGGTGTCAACTTTCCTGAAG AGGTTGGTCACTCTTGCAGCAAGTCTATTTACTTCTGAGCCCGATGGATATTTTTCATTTGTAGTTTGTAGCTCTTTGGA AATATATGAAATAATTGATACTCATGAACGTTTGTATACAGAAGCTTTGCAAGTGGCTTGTCCAGTTGCTTATGGCTCTG GATTACTTACATGTAAATCACATTCTTCATCGTGATGTTAAGGTGAAGGACTTATTTAAGTTCAATAACAGTAGATTTTA TGTAGTTAATATCCCAGAAACTTTGAGGACCAGCTTTGTGTTAATCTTATTTCCTCTTCTATTTCAGTGTTCAAATATAT TCTTGACAAAAAATCAAGATATACGTCTAGGTAAGTGGCCTTATCCACTTTATCCTCACACGGCTCTTGGACCTAGTTAA TGTGTTGGACGTGTAAGGTTTCTGGTCTGCTGTCCTTATGTTGTGCATGTTGGATGCAGGTGATTTTGGTCTTGCTAAAA TGTTGACATCTGATGACCTTGCTTCCTCAGTGAGTGATGTCTCCAAATTACTGTTTTGTTCTCTGTTTCAGCATTTGTCC TTTTGGATTAGTTACCGTATGTTCTTGCTCTAAACTTAGATTGTTGGGACCCCAAGTTATATGTGCCCGGAGCTGCTTGC TGATATACCCTATGGCTCCAAGTCAGATATCTGGTCTTTGGGTAGGAAAAATCTCATTTACGCTCCTCGATTTCCTAATA ATTACCCTTTTCTTTCCCCTCTAGTAAAGTTTCTTTAATTGCATTCGTCATTTGTCAACATTTGCCAGGATGCTGTATTT ATGAAATGGCTGCTCTAAAGCCTGCTTTTAAAGCTTTTGTAAGTTACTTTCTATTTTTAAGCTTTTATGCTCACCATTGT TCAAAAGATGAAATATTATCCCCACGACTTTTTAATCCTAACCAGTAGACTAGAATTCACTGGGGTACTAAATTCATTTT AAACTCTAAACATGATGTTGTTGGATAACAAGCATTCATGGTGATGTTTAAAACTGAGTTATTTTACTTTGGGAAGCATG TGCTTCACATTCATTTATGATGGCTTAATAACTTCCAATATTTCACATTTCTAAGTGTGGAGCACAACATAAAATTGCTG ACTATTTATTTTTTGTGTGTTTGTCTTCATCTGAGCAGGACATACAAGCGTTGATTAACAAAATAAACAAGTCTATAGTA GCTCCACTGCCAACTATGTACTCTAGTGCTTTGTGAGTCATCCATTTCATGCTAATCCTTAGTTTTTAAGAATTATCTGT TTTTTCTCTACTTTATCAGACTTTTTTAGTGCCTATATGGCTATACCTGCTGGTTTTGAAAAACGTCAATGGCTGGTTTA CGTGAGCATGCATACATGCAGATATTGAACAAATTAGAAATGACCCTCCTAATGATTCATAGTTTATCAAACTTACACTA GATTTTATGTTCTCTCTGATAAGTTTCCATATTTTATTGTGGATTGAAATTTTAAGTGGTCTTCCATCCTTGGAGTGATA TATGTTAATTGTTAGGAGTCATGTCATTTAATATATGACAGAGTCTTTCTATATACTTGAATCACATAATATTACCATTT ATTATGACAGAACTAGAAGGACGGAATGGAATTCAGTCATGCTATTTGGTCTACCATCATGCATTTTTCAATAACAACTC TGTTTTAGCAATAAGCAATTTTGTTCTGATTAACTCCTGAACCCTGGCCTGTTTATGTCTCAATATTTCTTGTTCTTATC ATTTGATCTTTTGCAGTTATAAAATATTCCCATGTTATGGGCCTTAGTTAGGGACATGATTTGTTTAACTTATTGTGATT TATATCTATCTATTCTTTCAGTCGAGGGCTAGTCAAAAGCATGCTGCGGAAAAATCCAGAGCTTAGGCCACCTGTAAGTT TTATCTTTTGGTATCTCTTTGCATTTATCAAGATAGACTAGTGTATAAAAGAAAGATGGTATATAGAATTGCTGATGAAA TAGTGTATATGGCTTACATCTGATTGTCTTTTAAGTGATAAATATGAGCTGGATGTCATCATGAATAAATTTAAATGCAA GTTTTGATTATGTGGTCTCATCTTTTCTTTCAGTTATTCAAAAAATAGTTTTATCTTGTACTTAGTGAGTAGGAAGACAG AACAATGCTACTTGGTTTACTTAGGGACTACACGAACTTTACAATACCTATTGATTAGTCAAGAGAAATTCAATATGAAG ATAAAGATGGAAGTATATTGATTAAGGTAGTGTGCAATAAGGCCTAGAGCATTAAAAATCTGTTGAGACAAACAATAAGT AAGAGTTTAAGAGGTTTAAATTTTAAAAAAATTCATCACTTTTACTTGATAGGAGCTGAAAGTTAGAATAAATAGAAGAC ATGTATTTTTTTGTTAGCTGAAATTTTGTTTGTTCTCTTTAATCTATGCTTATTCTGCATGACATTGGCTCTTGGGTAAC TTTAGTTTGGTGGATATATTTTAAGCAACTTAAGGGAAGTTTGTTTTTGCAGGCTTCAGAGTTACTAAATCATCCACATC TTCAACCTTACATTCTTAAAATTCACCTAAAGTTAAATAGCCCAAGAAGAAGTACTTTTCCATTCCAATGGCCTGAGTCA AACTACATGAGGAGAACTCGGTTTGTAGTGCCAGACTCTGTTTCTACTCTTTCTGACCAAGATAAATGTTTGTCATTAAG CAATGACAGGTCCTTGAATCCTAGTATTTCTGGAACTGAACAAGATTCTCAGTGTTTCACTCAAAAGGCCCATGGATTAT CCACTTCTTCAAAGGAGGTGTATGAAGTATCTGTTGGCGGTGCCTGTGGTCCGTGGAATACTAACAAAACAAAGTCCCCA ACTGTTGAGAGAACACCAAGATCAAGAGCAGATAAAGACTCCACCGCTGCCAGAAGGCAGACGATGGGACCATCCAAAAT ATCCCGTTCTGGTTCAAAGCATGATACAGTAAGTTTATCTTCTGCAGGACTCAATGTATTAATTTATCTTGGTGGCTTCC ATGAAAATATATTGAAAAAAAAATGAACTCATGCTGACTTGCTGAGCAACTTCTCCATCTCTTCCCAATGATGGGAGTTG AGCATTATGCCATTGCCATCTTCAGATCAAAATAATGGGAGTTGATAATTATGTTTTCCTACCGTCTGAAAAAAAGAGAA TTATGTTTCCTAAATGATGGCCTTCGTACTTGAATTTTATATCATATGATACATTTAGGTAGGCTGTGGATGCTGCATGC ATGTTTGAATATGTGAATTTCCTATGTTAGCAAAGATCATGCTGATGTGATTGGATCAGATGTCAAATTTCAATAGATAG TGACTTCACATTAATTTCTAGTAGAGCTTAATTGATTGCTGGTGATATTTGCGATGTTTGGCTATTTATTGATTCCTCTG TTTGCTCATCATTTCAGCTTCCAGTCTCTCATGCACCATCTGTGAAGTTTCCCCCACCAACTCGTAGAGCATCCCATCCA CTGCCTACAAGAGCCTCGATGGCCAAAGCAACCCTTTACACCAATGTTGGCACCTTTCCAAGAGTGGACTCTGATGTTTC TGTTAATGCGCCACAAATTGACAAGATTGCAGAATTTCCATTGGCCTCTTGTGAGGATCTTCCTTTCTTCCCTGTTCATG TACCATCATCAACATCAGTCCACTGCTATTCTAGCTCAGCTGGGAGTGCTTATCGCTCCATCACAAAGGAAAAGTGTATT CATGAGGGCAAAGTTACTGTCCCTGGTGGTTCATGTCCAAAGGGAAGTGAATGCTCTAAGCATGTGACAGCTGGTGTTTC GATCCATTCCTCTGCTGAGTTGCATCAGCGTCGGTTTGACACCTCGTCATACCAGCAGCGTGCGGAGGCATTGGAGGGTT TGCTGGAGTTCAGTGCCAGGCTTCTACAACACCAGAGGTTTGACGAGCTTGGGGTGTTGCTAAAGCCATTCGGGCTTGAG AAGGTTTCTCCAAGGGAAACTGCTATTTGGTTGGCCAAGAGCTTTAAAGAAACTGTGATCTAAGGTTTTTTCTTTTCATC CACTTATATGATAATTGCCATCGGAAAGTGTACATAAATGTTGTATATTTTGTGATACAATATGAAGAGTGGTTTTTATT ATTGGCATTGGCATTTTCCATGAGATATACTCTGTTCATGGTAACCAATTTGCTTCTTATGAAATAATACTACACAAACA TCACT
CDS sequence (LotjaGi1g1v0716000.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGCAGTATGAAGTTCTAGAGCAGATTGGCAAAGGTTCATTTGGTTCTGCTCTGCTTGTGAGGCACAAACACGAAAA GAAACTGTATGTTCTCAAGAAGATCCGCCTTGCTCGCCAAAGTGACAGAACCCGTCGGTCTGCCCACCAGGAGATGGAGC TTATATCTAAAGTTCGAAACCCATTTATTGTGGAGTACAAAGATTCCTGGGTAGAAAAGGGTTGTTTTGTATGTATCATT GTCGGCTATTGTGAAAGAGGAGATCTGGCTGACGCTATAAAAAAGGCTAATGGTGTCAACTTTCCTGAAGAGAAGCTTTG CAAGTGGCTTGTCCAGTTGCTTATGGCTCTGGATTACTTACATGTAAATCACATTCTTCATCGTGATGTTAAGTGTTCAA ATATATTCTTGACAAAAAATCAAGATATACGTCTAGGTGATTTTGGTCTTGCTAAAATGTTGACATCTGATGACCTTGCT TCCTCAATTGTTGGGACCCCAAGTTATATGTGCCCGGAGCTGCTTGCTGATATACCCTATGGCTCCAAGTCAGATATCTG GTCTTTGGGATGCTGTATTTATGAAATGGCTGCTCTAAAGCCTGCTTTTAAAGCTTTTGACATACAAGCGTTGATTAACA AAATAAACAAGTCTATAGTAGCTCCACTGCCAACTATGTACTCTAGTGCTTTTCGAGGGCTAGTCAAAAGCATGCTGCGG AAAAATCCAGAGCTTAGGCCACCTGCTTCAGAGTTACTAAATCATCCACATCTTCAACCTTACATTCTTAAAATTCACCT AAAGTTAAATAGCCCAAGAAGAAGTACTTTTCCATTCCAATGGCCTGAGTCAAACTACATGAGGAGAACTCGGTTTGTAG TGCCAGACTCTGTTTCTACTCTTTCTGACCAAGATAAATGTTTGTCATTAAGCAATGACAGGTCCTTGAATCCTAGTATT TCTGGAACTGAACAAGATTCTCAGTGTTTCACTCAAAAGGCCCATGGATTATCCACTTCTTCAAAGGAGGTGTATGAAGT ATCTGTTGGCGGTGCCTGTGGTCCGTGGAATACTAACAAAACAAAGTCCCCAACTGTTGAGAGAACACCAAGATCAAGAG CAGATAAAGACTCCACCGCTGCCAGAAGGCAGACGATGGGACCATCCAAAATATCCCGTTCTGGTTCAAAGCATGATACA CTTCCAGTCTCTCATGCACCATCTGTGAAGTTTCCCCCACCAACTCGTAGAGCATCCCATCCACTGCCTACAAGAGCCTC GATGGCCAAAGCAACCCTTTACACCAATGTTGGCACCTTTCCAAGAGTGGACTCTGATGTTTCTGTTAATGCGCCACAAA TTGACAAGATTGCAGAATTTCCATTGGCCTCTTGTGAGGATCTTCCTTTCTTCCCTGTTCATGTACCATCATCAACATCA GTCCACTGCTATTCTAGCTCAGCTGGGAGTGCTTATCGCTCCATCACAAAGGAAAAGTGTATTCATGAGGGCAAAGTTAC TGTCCCTGGTGGTTCATGTCCAAAGGGAAGTGAATGCTCTAAGCATGTGACAGCTGGTGTTTCGATCCATTCCTCTGCTG AGTTGCATCAGCGTCGGTTTGACACCTCGTCATACCAGCAGCGTGCGGAGGCATTGGAGGGTTTGCTGGAGTTCAGTGCC AGGCTTCTACAACACCAGAGGTTTGACGAGCTTGGGGTGTTGCTAAAGCCATTCGGGCTTGAGAAGGTTTCTCCAAGGGA AACTGCTATTTGGTTGGCCAAGAGCTTTAAAGAAACTGTGATCTAA
Protein sequence (LotjaGi1g1v0716000.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEQYEVLEQIGKGSFGSALLVRHKHEKKLYVLKKIRLARQSDRTRRSAHQEMELISKVRNPFIVEYKDSWVEKGCFVCII VGYCERGDLADAIKKANGVNFPEEKLCKWLVQLLMALDYLHVNHILHRDVKCSNIFLTKNQDIRLGDFGLAKMLTSDDLA SSIVGTPSYMCPELLADIPYGSKSDIWSLGCCIYEMAALKPAFKAFDIQALINKINKSIVAPLPTMYSSAFRGLVKSMLR KNPELRPPASELLNHPHLQPYILKIHLKLNSPRRSTFPFQWPESNYMRRTRFVVPDSVSTLSDQDKCLSLSNDRSLNPSI SGTEQDSQCFTQKAHGLSTSSKEVYEVSVGGACGPWNTNKTKSPTVERTPRSRADKDSTAARRQTMGPSKISRSGSKHDT LPVSHAPSVKFPPPTRRASHPLPTRASMAKATLYTNVGTFPRVDSDVSVNAPQIDKIAEFPLASCEDLPFFPVHVPSSTS VHCYSSSAGSAYRSITKEKCIHEGKVTVPGGSCPKGSECSKHVTAGVSIHSSAELHQRRFDTSSYQQRAEALEGLLEFSA RLLQHQRFDELGVLLKPFGLEKVSPRETAIWLAKSFKETVI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 600 | 600 | 0.0 | – | |
| PANTHER | 1 | 600 | 600 | 0.0 | – | |
| SUPERFAMILY | 1 | 320 | 320 | 6.74E-82 | ||
| Gene3D | 1 | 83 | 83 | 3.8E-22 | – | |
| CDD | 3 | 258 | 256 | 4.64882E-138 | – | |
| ProSiteProfiles | 4 | 258 | 255 | 45.008 | ||
| SMART | 4 | 258 | 255 | 1.1E-81 | ||
| Pfam | 4 | 257 | 254 | 7.1E-63 | ||
| ProSitePatterns | 10 | 33 | 24 | - | ||
| Gene3D | 84 | 272 | 189 | 5.3E-57 | – | |
| ProSitePatterns | 125 | 137 | 13 | - | ||
| MobiDBLite | 356 | 421 | 66 | - | – | |
| MobiDBLite | 366 | 380 | 15 | - | – | |
| MobiDBLite | 382 | 401 | 20 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi1g1v0716000.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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