Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0724300 |
| Transcript ID | LotjaGi1g1v0724300.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | transcription factor-like protein; TAIR: AT5G06839.3 bZIP transcription factor family protein; Swiss-Prot: sp|Q52MZ2|TGA10_TOBAC bZIP transcription factor TGA10; TrEMBL-Plants: tr|A0A151TUB5|A0A151TUB5_CAJCA Transcription factor HBP-1b(C1); Found in the gene: LotjaGi1g1v0724300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:129539747..129545837) extracted from Lotus japonicus Gifu genome v1.2.
ATGAGGCCTCCAACTCTCAACATTTTCCCCTCTCAGCCTATGCACGTAGAGCCATCATCATCCAATTCCAAGGTAATAAT AACTAGTATCGACCCTCTTTCTTTGTCAATTGTGTTAGATGCTATACTTCCATTTTGTCGACATCAATAGTATTTGCTAG CCTATTTGCTAATAAACAACACTTATAAATTGACATGTTTTGTTTGTGGTTTTGTTTGACTTTTAATTATAGGCTCTTAG CATAGACTTGGTAAATTCTTCACAAACCAGTGGATCCAAGAGAGCAATATCAGAGCCGTCCATGGAGTTGGCCAACCCAA GAAATGAAGCCGCCTCTGCACCTGAGCCACCCAAAGGTGTCAAGGTTCGTACATAAAATATATATATAGAGAAAGAAAAA ACATATCTATCTATCTGTTAAATTTAGTTATATTATAATTGAATAGAACAAGAATCAGAGTTTGGTAGCATCTTTGAAGC CAGAAGTTCAGACCTTTTTTAAGTTACCCAATTGATATTTATTTAATTATTATGCTCTCTCAACAATTTCTCTAACTATT ATTGTTCACCTACCTATGGGGGTTTACTATTGCAGCAGCGAGTGAGCATTGGCAAGGGTCCTACCTCAAGTTCTGAACAT GAAGGACCAAAGACACCAGATCCAAAGGTTAACTATTTAGTTACTCTATCTCTCTCTATTTTATGGGCATCTTCATTTTT TTTAATTTGAGTGACAATCAATGCTTAATTTATATGGTGGCTGCTTGGAAAACGTTATGCACAGACACTCAGAAGACTTG CTCAGAATAGAGAGGCAGCTAGGAAAAGCAGGCTGAGGAAAAAGGTAAGCGAATCCCCAAGAAGATATATATATTTGATC TCAAGTGTGTTTTTTTTACACTTTTTAGGTAAAACTTGGCAATGCTCTCTTACTTATGATAAAATAATGTACCATTCTAT TTGTCCTCTCTCTTTCTCAGGCCTATGTTCAGCAGCTAGAATCGAGTAGGATTAGGCTCAATCAGCTGGAACAAGAACTA CAGCGTGCAAGAGGCCAAGTAAGAGAACAAAAAAAACCTTTCTTTTTAGTCATCCATAACACTATGTGCATGTTAGTATA CACACCGAAAAGTCACAGTGAGTCTAAAATCACGCAGGATAACTTTCTTTAGTTTTTGAGACTTTTTCACCGTAATTTTT CATTGTATATTTTAACATGGAGTATGCTCGATGATGATATCGAGGAAGTATGAAATTCTAACATGAGTGGTGGATGGTTA TTTCTTTTTTTAGGGCATGTTCTTTGGTGGGGGTGGTGCAATTGTGGCAGGAGAGCAAGGCCTTCCTGTCCCTATGAATA GCACTAGCTCAGGTATCTATTCCTATTTCCCAGTACTGTCATAAAACAAACATATCAATTGTGCTTTAGTTGTTGATCCT CTTGGATTGTCATTTATGAATTTTATTTATATTTTTCTCAGAGGCTGCAATATTTGATGTGGAATATGGTAGATGGCTAG AGGAGCACCACCGTTTAGTTTGTGAGCTGAGAGCTGCAGTTCAAGAGCACCTTCCTGAGAACGAGCTTAGGATGTTTGTG AACAATTGCTTGGCACATTATGACCAAGTCATGAACCTCAAGTGCTTAGTGGCCAAAACAGACGTATTCCATGTTTTTTC TGGCATGTGGAAGACCCCAGCTGAACGTTGCTTCATGTGGATTGGTGGATTCAAACCATCTGAACTCATCAAGGTATATA CAATACAACTAACGATCTTATCCAATAGCTTAGTGTGTTTCAATACCAGTAGAGCCTAAATGATGTGTGTGAATGCAAGT TTGCACTAATGCGCACACGGATAGCCAAATACATGCTCAATCTTAATATTTACTGTATTTTTCAATATGACTTTCTTTTC CATGTTAATTTATTGGAATAACTTGCATGCGGAAAGGAGGCATGAAATTGGGTAACGTTATATACAAAATTCAAAAGAAG TTGACATTATAAATGCATGAAATAAACTCCGTTTTGTCGGTCAGACTATACCTAAGAAAACAAAGGAGTATGAATTTAAT GCCATAAATATGAATGACGAAATGAAACCATGAAGATTTTCCGGTCATGAATGGGAAGTTAGGTTTCATCCCCCATGATC CCATGTCTTCAACTCCAATTTGTAACCGGAACTGGAGATAATCGATTAAGAAATTATGCAAATTAAAGAAAAAGAGAGTG GCACGCACGGGTCTCTATCTCTCTATCATTTTCTTGTTTTCAAATGGTTGTTGATGGGAAATGGGAATAAAGTCCTTGTT TTCATACCCATATCTCCTTGTACCCTAGTTAATCAATAAACAACCTCTCACAATCATAATATTATGTGATTTGACATCCA TATATGTGCACAGTTATACAATTATACATACTAGAATAGCATAAGTATATGTGTATATTGATTTAATGATTATGATCGAC TTTGTGTGTTTTAGATTGTTCTGACTCAAATTGAGCCTTTAACGGAGCAACAAATATTGGCTATATGTGGATTGCAACAA TCTACACAAGAAGGAGAAGAGGCTCTTTCTCAAGGGCTTGAAGCTCTCAATCAATCTCTTGCAGACACTATCACATCAGA CTCATTGAGCTATCCTCCTAACATGGCTAATTACATGGGACAAATGTCTGTGGCCATGAACAAGCTCGGAGCTCTTGAAG GTTTGGTGAGACAGGTACACACTACATTACTTTCACTTCATATAAACATTTGGTAATTTAAAATAATAATGTAATATTTG TTTAGGTGTGAAAATTTATTACTCTCATCATAAATAATGTTAATCATAGACATAGTATTTGGTTTTGAAGATTCGGTATG GGAGTTTTCGTGAGCTAGTGATTTTGGTTGATTAGTTTTGTCTTGTGGTCCCTAATGACTTAGTTTTCATAACGGATCTC GTGGGGTCAGTTATAAGTACAAGAATCTGTTGCTCCTCGGGTAGGAAAACCTGCCCCAACCCCATAAACTAAACTGCTCT TTTCCACGCATTTTACTCTTTGGTGAGATGCATCGTTTCGTGTAAATTTGGATACACAGTAAAAAAATTATGCTAAAGTT AAAATTACAGTGAATCAACATAAAAAATAAGAGAAGAGTTACTTTTATTCATCGTAATTTTAACTTATTTTAATTTTTTA TTGTGTATTCAAACATTCATTTCATTCGGGGAATCTACAAACAAACATTGGGGGCCCAATATTTATATCTCTAAAAAGAC TCTAGTTCCATTCACTTCTGTCTCGTACAGATACTTGGATACTCTATAAACAGAGACGTGCATCTCAATAAGGAATATTA CATGCAACAAATTGAAGGTGCATGTGTACTAAAGCTTAAAGTTGGTAGAAGAATTAGCATCTTTGTAGTACATGTATTTT AAAAAGTGATTGGATAAGTACACATACGCATAAAAAGCATAACAAAGGTATCATATTAATTAAGAAGGATAAAATACATT AGCATGAGGATATATATGATTTTGAACATTTTTCATGAACATTGAATTCCTAAGGTGTCTATAGTATGTGTTGTTATTGA TTGAATACACGTGACAGTACTAAGGTTAGTGGTCCCCTACCTATACAATTCTAATGTGAAGATATGTCCCTCTAGCTAGG CCCATATCTATGTGATGTCATGGTCATAACCGTTTGACTCCAAGACACCACTACATAGACCCTTCCCCATAACTTTCCTT TTTGACTACTTCTATATACACTCTTGAAATTACTAGAAATCCCACATGGGGTGGAATTTGGATTTGATGAAGTTGCATTT TCCTAAATTCATTTTGTAGTCATTATTCCAACACTGTTTAATTAAGATCCTGCAACTTGAATTTAAAGTGATTAATTATA CATCTGAAATCTAATTTTAATTTTGAACCGCTTGATCTTAATTAAACAGCTATGAAGCTTTGACTAGAATGAATATGTGA CCGTAGGAAAACCGAATCTAGTGGGTTAAAATAAAAACTATAGTATATAGATGCTAGAAATCTAAAATGTCTTAACCATT CTACACTCAATCCATAGTCCAACACTCTTCAACCATTTTGGGCCCACATCCTCAGCCCAACATGCACAAAGAGAGTTTGT GTTTGTTTAGCTTTGTGTGGGTGAATTTTGAATGGAGTGGGATTCTTTTCTAAAGTAAGAATGTGATCACTTGGTTTTGG AATTTTTATCAAAAAAAAAAAAAAAAGTTGACACCTTTGGTAAAATGGCCTGAGTTTTTTTTGTGAATTTTTTGCATTGG CAATTAATCTGCAAATGCCACCTCATTATGTATGTGTGTGTGCAGTGAATATTATGTATGTGTGTGTGCAGTGCTGTATT CATCATCTCACTAGCTAGAGTTGGTCCACCAAACTTTTATTAATTTCTACACATGAATGATGGGGGGGGGGGGGGGTTAT TTACAAGTCATCCAAGAATATATTCTCTCTTTCAATCTAATTAACCAACCGAAACCATGTGAAACGAAAAATGTAGGAAT AATTAGGTAGGCTAGATCAATCATAATTATGATTATGTGATTTAATCACAAGTTAACCTCAAGTCGTAGTTTGACCAATT TGTAGTATTTGCATGTTCTACACTTCTATTCTATGTTAATTATGGGATCAATTTGATCATTGTTATTCTTAATTATTATT GTTGCCATTTCGGATTCAGAAACCCAATGTTTGAAAATATTGTCTAAGCGTTGAACCATTAGTCATACTTCTTGAAAATA ATACAGTCCGTACATTAACTTGTATGTGTATAATAAGGTGTTTTACGGCTCGATCCGTTGAAAATGTTCTACAATATTTT ACTTTTGATATTGAAGTGTTTTAATGAAATTTTGATCAAATATTCCAGAATTTGTCCATGAAAATCTCCCCATGCATTGA ATCAGGGGGTAAAGGTTTCATTTCTTAGTTTAATTTCTTTCAAAGTTTTGAAAAAGAAAGAAAGATTGTTCTAGTTTTCC TTCCAACTTCTTTTGTCTTTTTCTGACCATTTTAACTTCAAATATATTTGCTTCTAAGCGTTGAACCATTAGTCATACTT CTTGAAAATAATACAGTCTGTACATTAACTTGTATGTGTATAATAAGGTGTTTTACGGCTCGATCCGTTGAAAATGTTCT ACAATATTCTACTTTTGATATTAAAGTGTTTTAATGAAATTTTGATCAAATATTCCAGAATTTGTCCATGAAAATCTCCC CATGCATTGAATCAGGGGGTAAAGGTTTCAGTTCTTAGTTTAATTTCTTTCAAAGTTTTGAAAAAGAAAGAAAGATTGTT CTAGTTTTCCTTCCAACTTCTTTTGTCTTTTTCTGACCATTTTAACTTCAAATATATTTGCTTCTAACTGCAGTTCTATC CAGTATCCACCATTAAAATTATAAATGTTTTTACAACTAACATTCATTACATGTTATTTACAATTCATTACATGTTATTT AGGATATGGTTCTCATGTACTAAAACTAATTTTTTTTTAAATCATTTGAACCTGCATGTGAACCATTTCTTAGTTCAGAT GAGTAGACAAAGTCATTATTTTATATACTTTTCGCTAGATAGAATGTCAGAGGGGAAAATCAAAAGTTGAAATTACCTTT CCAATATCCTAAACATCAAATGTAGCTGATGAACTCTTTCTTTTCTGTTGAATATGTAACAAAGATATCCTTAACCTGAA GCATACTATGAATGGTTAAAATTATTTCATTCAAATCTAGTTTTAACTATTTATTTATTTTCTAAGGTTAAAATTGAAGC ATGTTCTCACCAGATTCTCTGTGTATATGCATGTGTAATTGAGAATTAGAAGAAAGAAAAATAATTAGAAAGTTAACTTG TTTTGTGATTGAAACTTACAGGCAGATTGTCTGCGGCACCAAACCATTCACCGTCTGCATCAGATCCTAACGACGCGTCA AGCGGCAAGGTGTTTTCTGGCCATGGCGGAGTACTTCCACCGTCTGCGAGCTCTGAGTTCTCTGTGGGTGGCACGCCCTC GCCAAGAATGA
CDS sequence (LotjaGi1g1v0724300.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAGGCCTCCAACTCTCAACATTTTCCCCTCTCAGCCTATGCACGTAGAGCCATCATCATCCAATTCCAAGGCTCTTAG CATAGACTTGGTAAATTCTTCACAAACCAGTGGATCCAAGAGAGCAATATCAGAGCCGTCCATGGAGTTGGCCAACCCAA GAAATGAAGCCGCCTCTGCACCTGAGCCACCCAAAGGTGTCAAGCAGCGAGTGAGCATTGGCAAGGGTCCTACCTCAAGT TCTGAACATGAAGGACCAAAGACACCAGATCCAAAGACACTCAGAAGACTTGCTCAGAATAGAGAGGCAGCTAGGAAAAG CAGGCTGAGGAAAAAGGCCTATGTTCAGCAGCTAGAATCGAGTAGGATTAGGCTCAATCAGCTGGAACAAGAACTACAGC GTGCAAGAGGCCAAGGCATGTTCTTTGGTGGGGGTGGTGCAATTGTGGCAGGAGAGCAAGGCCTTCCTGTCCCTATGAAT AGCACTAGCTCAGAGGCTGCAATATTTGATGTGGAATATGGTAGATGGCTAGAGGAGCACCACCGTTTAGTTTGTGAGCT GAGAGCTGCAGTTCAAGAGCACCTTCCTGAGAACGAGCTTAGGATGTTTGTGAACAATTGCTTGGCACATTATGACCAAG TCATGAACCTCAAGTGCTTAGTGGCCAAAACAGACGTATTCCATGTTTTTTCTGGCATGTGGAAGACCCCAGCTGAACGT TGCTTCATGTGGATTGGTGGATTCAAACCATCTGAACTCATCAAGATTGTTCTGACTCAAATTGAGCCTTTAACGGAGCA ACAAATATTGGCTATATGTGGATTGCAACAATCTACACAAGAAGGAGAAGAGGCTCTTTCTCAAGGGCTTGAAGCTCTCA ATCAATCTCTTGCAGACACTATCACATCAGACTCATTGAGCTATCCTCCTAACATGGCTAATTACATGGGACAAATGTCT GTGGCCATGAACAAGCTCGGAGCTCTTGAAGGTTTGGTGAGACAGGCAGATTGTCTGCGGCACCAAACCATTCACCGTCT GCATCAGATCCTAACGACGCGTCAAGCGGCAAGGTGTTTTCTGGCCATGGCGGAGTACTTCCACCGTCTGCGAGCTCTGA GTTCTCTGTGGGTGGCACGCCCTCGCCAAGAATGA
Protein sequence (LotjaGi1g1v0724300.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MRPPTLNIFPSQPMHVEPSSSNSKALSIDLVNSSQTSGSKRAISEPSMELANPRNEAASAPEPPKGVKQRVSIGKGPTSS SEHEGPKTPDPKTLRRLAQNREAARKSRLRKKAYVQQLESSRIRLNQLEQELQRARGQGMFFGGGGAIVAGEQGLPVPMN STSSEAAIFDVEYGRWLEEHHRLVCELRAAVQEHLPENELRMFVNNCLAHYDQVMNLKCLVAKTDVFHVFSGMWKTPAER CFMWIGGFKPSELIKIVLTQIEPLTEQQILAICGLQQSTQEGEEALSQGLEALNQSLADTITSDSLSYPPNMANYMGQMS VAMNKLGALEGLVRQADCLRHQTIHRLHQILTTRQAARCFLAMAEYFHRLRALSSLWVARPRQE
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 95 | 95 | - | – | |
| PANTHER | 5 | 384 | 380 | 1.4E-213 | – | |
| PANTHER | 5 | 384 | 380 | 1.4E-213 | – | |
| MobiDBLite | 12 | 43 | 32 | - | – | |
| SMART | 88 | 162 | 75 | 1.6E-6 | ||
| Pfam | 89 | 133 | 45 | 6.5E-8 | ||
| ProSiteProfiles | 90 | 134 | 45 | 9.22 | ||
| SUPERFAMILY | 92 | 134 | 43 | 4.75E-7 | – | |
| Gene3D | 92 | 139 | 48 | 7.0E-10 | – | |
| ProSitePatterns | 95 | 110 | 16 | - | ||
| Coils | 111 | 138 | 28 | - | – | |
| ProSiteProfiles | 166 | 380 | 215 | 32.462 | ||
| Pfam | 184 | 258 | 75 | 1.3E-30 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | DNA-binding transcription factor activity | A protein or a member of a complex that interacts selectively and non-covalently with a specific DNA sequence (sometimes referred to as a motif) within the regulatory region of a gene to modulate transcription. Regulatory regions include promoters (proximal and distal) and enhancers. Genes are transcriptional units, and include bacterial operons. | ||
| Biological process | Transcription, DNA-templated | The cellular synthesis of RNA on a template of DNA. | ||
| Biological process | Regulation of transcription, DNA-templated | Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription. | ||
| Molecular function | Sequence-specific DNA binding | Interacting selectively and non-covalently with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding. |
Expression pattern of LotjaGi1g1v0724300.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…