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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0724900 |
| Transcript ID | LotjaGi1g1v0724900.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Receptor-like protein kinase; TAIR: AT5G06820.1 STRUBBELIG-receptor family 2; Swiss-Prot: sp|Q9FG24|SRF2_ARATH Protein STRUBBELIG-RECEPTOR FAMILY 2; TrEMBL-Plants: tr|K7KF15|K7KF15_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0724900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:129604602..129607937) extracted from Lotus japonicus Gifu genome v1.2.
GGTTCCTGCAGAATAACAAATTCACTGGATCAGTCGCCTACCTGGCTGAACTTCCACTTACTGATTTGTAGGGTTATCAC TAACATTTTCCCTATATATGCACATTTTCCCTTCTATTAGTTGCTCATTTGTCTATGTTGCTCATTTGTCTATGTTGCTA GGAACATTCAAGATAATTTGTTTAGTGGCATTCTTCCACATCATTTCCAGTCCATACAAAATTTATGGTTAGTGACAACT ATTATCATCCATGCTTCTTGCATCAAATGAATTAAAATAAGATTGAATGATTACACTCTATACCTTCATTTAGGATTGGA GGGAATAAATTCCATGCAACGGACAACTCTCCTCCCTGGACTTTTCCTTGGGATACTTTACAAGTTGACCATAATATTAG TCACCCACCCACAGCCACAACTCAGGCAAATGCCATAAAGAACTATGCTCCTCCCAAAGTAAGTGAGTACAAGAAGAAAC ATATAGGTCCTGGAGGAATAGCTCTAATGGTTGGTGGGGGAACACTTCTGGCTACATGTCTGACATTCTTTGTTGCAATC CGTTTGAACAAACTCCGTGCACAAAGCTTTGACTTGAAGAACTTTGAAAGCAACCATATCTCTTTGCATTCTCATCCAAC CAGTGCAACCATAGGTAACTCATACAGAAATGCATATGGATTCTGAGATACTATATCCCGTTTGTCATGATTGCTAACTG AGGAAATCTTGAGAAAATCTGGAACAAATACTATTAGAAAAGTTTGATATGATATTAAAAGATTGCTTTTTCTATGTAAT TATCAAAAAGCAACCTCTCTGAGTGAGGATGCCATTCCATTTAGTATATCTGTCAATTCATTACTATTGTTTATCATGCT TTCCTTTTTCCACAATTGTGATAGAGATCTCTTCTGCTGCACTGGATGAGAGCCCACAAATCCCACCATCTTATACTGCA TCCCTTTTGGGTCCAATGCGATTGCCTTCCCTGCACCACAAAAATGTAGAGGAATCAGCAAGAAGGAGTTTTTCCAGAAG ACGCAGATTCACCGGAAAGACGAATATTTACACAGAAGCAGAGCTTCAGTTAGCCACCAACAACTTCAATGAAGGCAACC TTCTGGGAGAGGGATCTCTTGGTCCTGTTTACATAGCTAAATTTACGGATGGCAAAGTACATTCTTAAGCTATCTTTTAA ACACTAAAGTCATATTCCTTTTTTCTCAGGTTATGCAACTTTTTTTCTTGTTGAAGGTTTTGGCTGTGAAGAATATAGCA ATGGCTGGACAGTCTTTCAGAGAAGAGGAAAAGTTCCTGGATGTCATTTGCACGGCTTCCCGACTGAAGCACCCCAACAT TGTAGCACTCAATGGTTATTGTTTGGAGCGCAGAAAGCATCTTCTTGTTTACGACTACATTGGAAATTTAACTCTAGGCG ATGCTCTTCACAGTGGGGCATGCAAGCCTCTATCGTGGATCCACCGCCTTCGGATTGCTGTAGGTGTTGCCCAGGCCCTG GAGTAAGTTTAAGTTCCATGTTTCCTCAAAAATTTATGACTTGTTCATATGATAGTTGAAGCTCAACTCTTTAATGTCAT GCCAATGTTTTCAGCTATTTGCACTCAGCATGTTGCCCCCCTGTGGCCCATGGTAACTTGAAGGCTGCAAATGTTCTACT GGATGAAAATTTCATGCCTCGTGTTTGTGACTGTAGCTTGGCTATTTTGAGACCATTGAGGAGTGATCTAGTTCAGATTC CAGTAAGTAATTGCTAAGATTTTTGTGGCTTAAGTTACTTACAACTTGCTTTGAGCTATATAGTTCTACTACCTAAAACT TGATGATAGATGACAGTTACATTTGCTAATGCTCTCTGTTGGTTTTATCTTTCAGGTTGTTTTAACTTTTAAGTTGTCAC ATAAAACATTCTTTGTCAAAACTTTAGGCCAATTGAATGTTCCAGTATAAAGTCTGAGCAGAACTGGAATAGTAAATGAT TTGAACAACAGACAAGAGTATTAAAATTTGGTTAATTTTAGTGAACATTTGATGAAAGGGTTTCTTGAAGTTGAGATTAT AGAAGGATGCAAATTTGATTGTTTTTTATTCAAGATAAAGTATGATATTTTAATTAGTAAGTTTTGAATAGGACATAGTT CAGATTTTAGAACAAAGACTAAAATTGGGGTTCAGATTTTAGAACAAAGACTAAAATTGGGAGGTGCTCACAGTAGAGAC AAAAATGCAATTAGACCAAAATTTTATGAACCGCCTATTGCAATGTGAATCAGAAGCTTTACAATCATCTCCCTAAATAT GCCCATTGCAGATATAGGTTCACTGATCACTTTGATGACTTTTTGAAACAGGCTCCTGAGATTATTGGTAGAGAGAGAGG CTACTGCAGCAGAAGGAAAGACGTGTTTGCCTTTGGGGTATTGCTTCTGGAACTGTTAACAGGAAGGAAACCTTTGGATG GCTATCTTTTTCATCAATCTTGCATTCCATTTATTTCAACACGGTGCCAGGGTAGTTGGACCGAATTATGGCCTCTATTT CAATTTCAACACAGTGCCAGGCCAAGTGAGGAGCAATATCTGGTGAAATTGGCTTCACCCAAGCTTCATGATATCGTGGA TCCCAGCATGAAAAGGACATTTTCATCCAATGAACTTTCATGTTATGCTGATATCATCTCCCTCTGTATACAGGTATTTG CACCTAAATGTTATCATTAAGATTGTATTTTGCCATTTAGCACTCGGTTTTAAATCTTACCGTCTTTCCTACAGCCTTTA AAGCAATTCCGTCCTCCAATGTCGGAAGTTGTGGACTCTCTTGTATCTTTTTCCCAAAAGTTCAGCTTTGCAGAGAGCGA TATGGAAGATGGTGCTGATTTTGATCTATTTGAGAGGTCTTTCCGTTCAACCAACACATGCTTTATAGGTTCACCTGTAT TGAGCCATGTATCAGCCTGATATACAACATCAACGTTTGACGTAGAAGCCGCCTGGGTGATATTAACCAGCTAGAAGACA TTAAGGTGTTCTCTCATTGCATATGAGAATCATCAATGTTGCAGATAATTCAGTTAGACAAGGATGTAGTTAGTTGGACT TGGCTAACATACCTTATCTGGAAGAAGGTGGTTAGTTAATAGCTATAGCTGTGTATAAGTAGTCAGTTGACAGTTACAAG TGTGTATTGATGAATAACTGATGCAGTGTATTGTGATATAAATAAATATCTCAATACAATTTTTTTCAACTTAGTAATCC ATCACTCTCTCAATTCTTCCCCTCCCTGTATAGTGCTAATGCAGTGAGTGTGTTCC
CDS sequence (LotjaGi1g1v0724900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTTGGTGGGGGAACACTTCTGGCTACATGTCTGACATTCTTTGTTGCAATCCGTTTGAACAAACTCCGTGCACAAAG CTTTGACTTGAAGAACTTTGAAAGCAACCATATCTCTTTGCATTCTCATCCAACCAGTGCAACCATAGAGATCTCTTCTG CTGCACTGGATGAGAGCCCACAAATCCCACCATCTTATACTGCATCCCTTTTGGGTCCAATGCGATTGCCTTCCCTGCAC CACAAAAATGTAGAGGAATCAGCAAGAAGGAGTTTTTCCAGAAGACGCAGATTCACCGGAAAGACGAATATTTACACAGA AGCAGAGCTTCAGTTAGCCACCAACAACTTCAATGAAGGCAACCTTCTGGGAGAGGGATCTCTTGGTCCTGTTTACATAG CTAAATTTACGGATGGCAAAGTTTTGGCTGTGAAGAATATAGCAATGGCTGGACAGTCTTTCAGAGAAGAGGAAAAGTTC CTGGATGTCATTTGCACGGCTTCCCGACTGAAGCACCCCAACATTGTAGCACTCAATGGTTATTGTTTGGAGCGCAGAAA GCATCTTCTTGTTTACGACTACATTGGAAATTTAACTCTAGGCGATGCTCTTCACAGTGGGGCATGCAAGCCTCTATCGT GGATCCACCGCCTTCGGATTGCTGTAGGTGTTGCCCAGGCCCTGGACTATTTGCACTCAGCATGTTGCCCCCCTGTGGCC CATGGTAACTTGAAGGCTGCAAATGTTCTACTGGATGAAAATTTCATGCCTCGTGTTTGTGACTGTAGCTTGGCTATTTT GAGACCATTGAGGAGTGATCTAGTTCAGATTCCAGCTCCTGAGATTATTGGTAGAGAGAGAGGCTACTGCAGCAGAAGGA AAGACGTGTTTGCCTTTGGGGTATTGCTTCTGGAACTGTTAACAGGAAGGAAACCTTTGGATGGCTATCTTTTTCATCAA TCTTGCATTCCATTTATTTCAACACGGTGCCAGGGTAGTTGGACCGAATTATGGCCTCTATTTCAATTTCAACACAGTGC CAGGCCAAGTGAGGAGCAATATCTGGTGAAATTGGCTTCACCCAAGCTTCATGATATCGTGGATCCCAGCATGAAAAGGA CATTTTCATCCAATGAACTTTCATGTTATGCTGATATCATCTCCCTCTGTATACAGCCTTTAAAGCAATTCCGTCCTCCA ATGTCGGAAGTTGTGGACTCTCTTGTATCTTTTTCCCAAAAGTTCAGCTTTGCAGAGAGCGATATGGAAGATGGTGCTGA TTTTGATCTATTTGAGAGGTCTTTCCGTTCAACCAACACATGCTTTATAGGTTCACCTGTATTGAGCCATGTATCAGCCT GA
Protein sequence (LotjaGi1g1v0724900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVGGGTLLATCLTFFVAIRLNKLRAQSFDLKNFESNHISLHSHPTSATIEISSAALDESPQIPPSYTASLLGPMRLPSLH HKNVEESARRSFSRRRRFTGKTNIYTEAELQLATNNFNEGNLLGEGSLGPVYIAKFTDGKVLAVKNIAMAGQSFREEEKF LDVICTASRLKHPNIVALNGYCLERRKHLLVYDYIGNLTLGDALHSGACKPLSWIHRLRIAVGVAQALDYLHSACCPPVA HGNLKAANVLLDENFMPRVCDCSLAILRPLRSDLVQIPAPEIIGRERGYCSRRKDVFAFGVLLLELLTGRKPLDGYLFHQ SCIPFISTRCQGSWTELWPLFQFQHSARPSEEQYLVKLASPKLHDIVDPSMKRTFSSNELSCYADIISLCIQPLKQFRPP MSEVVDSLVSFSQKFSFAESDMEDGADFDLFERSFRSTNTCFIGSPVLSHVSA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 6 | 6 | - | – | |
| Phobius | 1 | 25 | 25 | - | – | |
| Phobius | 7 | 18 | 12 | - | – | |
| Phobius | 19 | 25 | 7 | - | – | |
| Phobius | 26 | 453 | 428 | - | – | |
| PANTHER | 67 | 318 | 252 | 2.9E-137 | – | |
| PANTHER | 67 | 318 | 252 | 2.9E-137 | – | |
| Gene3D | 78 | 194 | 117 | 1.5E-25 | – | |
| SUPERFAMILY | 95 | 408 | 314 | 5.47E-57 | ||
| ProSiteProfiles | 117 | 411 | 295 | 27.072 | ||
| Pfam | 118 | 314 | 197 | 1.5E-26 | ||
| Gene3D | 196 | 430 | 235 | 7.1E-37 | – | |
| PANTHER | 363 | 446 | 84 | 2.9E-137 | – | |
| PANTHER | 363 | 446 | 84 | 2.9E-137 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi1g1v0724900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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