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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0727500 |
| Transcript ID | LotjaGi1g1v0727500.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | GTPase Der; TAIR: AT4G02790.1 GTP-binding family protein; Swiss-Prot: sp|Q8H1F6|DGP3_ARATH DAR GTPase 3, chloroplastic; TrEMBL-Plants: tr|V7CZS8|V7CZS8_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0727500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:129922086..129926987) extracted from Lotus japonicus Gifu genome v1.2.
GGAAAATCAGAAAAAAAAAATAGTTTATTTTGAGAAGCTTTATTACTTTCGAATTATCCAAAAGAAGAGAATGAATGTGA GTGTTGTTGGACTTGGAGGCTAAACGATTTGCAGAAAAAACAAGGAAGGTAGAGGAAGTAGCAGCATGGCGATGAGTGTT CAGCTATCATCTTCATCAGGCTTGTGGGTACCCAACTCTCCACACCGTGTTCCCAGCCGAGGCAAACCCGGGTCCCCATC AGCTCTCGCTGCCACACCACCAACACTCTCATCTCAACCTCCCACCATTCAGGTAACCACCCTCACTCACCTACCCACAT GCTCCTTTCATTCAAGTTCTTATCTTTTTACTGTAAATATTCATTTGTAGCACTTGAAGAGCTTTCAATGTTGTGGGTTT GTTCATTGCTGTGTTATGAAATGTTTCAGAAATCCAAGTTTCTTCCTTTTTTTGTTTTTTCAAAGAGGATGTTCTGGACT TATGTATAATCAAACCAATAATTTAGTCGAGTCTTGTGGATGGAAAAAACGTCCGCGGGGAGAGTTTGCCCCACCATGAT GTGGATGTTCCCGGCTCGAGCAGGATTGTCTCCGAAGGAGGACACCTGTCATTAAAATTAACATTGGGTATTTTTGTGAT GAGAATGTTGCAGATAGTAGGGCTGAGAGGCCCTAGTTGGAGTGAAAATGGAATTGCCAATCCCAATAGCAATACATTTG ATGGCTGTGAAGGAGAGAATAATCTTTGGTCTGAACTTGACACTGATCTTTATCATTGGACAAAGGCCTTACGCCCCGTG CAGGTATTTATGTATCCATCAATGTGCCTTGTTTTGTGTTACATCATTGCATAACTTTTGTTAGGTTATTTATTCTTCCT TGGTATTGGGCAGTGGTTTCCTGGACATATTGCAAAAGCAGAAAAAGAGCTGAAGGAGCAGCTCAGGTTGATGGATGTTG TGATAGAGGTGCGGGACGGGCGAATTCCTATGTCCACAACTCATCCTCAGGTAAGGTTTTTCTTCTGTCTTTTGAATTTT GTTGAGTATTGACTTAGAGTTAACATGAAAGTGTTTTGTGTTAATTCTGTTCTCTGTACTCCTTGTGTTGACTTAAACCA ATTGGCATTTGATTGAACTTTTTTGGGGTTTTTCTTCTCCTCTTCCCATTATTTAAAATCTATAAGGTGTTCTCGTTTTC CCTCTTGGTTAAGGAAATCAATACTTGTTTCTTGCAGTTCTCTATTGTTGCTCTTGGCTTCTTTATCTGATAGGTACTTG CAGTCATTCTCCATGGCTTATTTGTTTGTTGAACATTATTTCTTCTGCCAATGTTAAAAATTGTTATGAATGTCACATGA TACTTCTTAATGGGGCATAAAGTATTAGTGAATAGTGAGACCCTGCATCCAATTACAATATTTAGGCCTTAGTAGGAACT AGGAACTAGGACAATACATTTCAAGTTTTCAACTCTTCGTCTAATTATTACTTCTGCTTTTATAGATGGATCTATGGCTT GGTAATAGAAAGAGAATTCTGGTTTTAAATAGAGAAGACATGATATCAACTGAAGACCGTAATGCTTGGGCAGAGTATTT TACTAGGAATGGCACAAAGGTTGTCTTCTCCAATGGGCAGCTTGGAATGGTATCCAAACAATTTTTTTTTTCTAGTTCTC GATGTTCTGAATGTTCTTGTACAAGATGTCTGATCCTATGTTGTAAGTACAGGGCACAATGAAGCTAGGCCGGTTAGCAA AGGAATTAGCAGCTAATGTAAATGTTAAACGCAGAGCCAAAGGACTACTTCCTCGTGCGGTGGGTTGCTCCTAGAAATTG CAAACCAATTTTGGTTCTCTTTTATTCATTTCATATACTAGTTTTCTTGTAAAAGGACTACTTCTCTACCTCAAAGAATA AGGAAACATATCTTTTATTTGAGGAAGAAATAACTTATATTTCTGTATGCATGCTAATTTTTGGCAACACTCTTGTAATT TAAAAGGACCATTTTTTCATCTCAAAGAATTAGAAAAAATGTGTTTTATTAGAGAAAGAGAGGACTGAATACATACTCAT TTTCACCACTCTCGTCCTCTCTTTCTTAGTTTCTTACAGCTTCTATGCTCACTGATTTAAAATATTTTTCTGTAAATGGT ATGAAATGTTATAGTTTTGCTGATTCCTTTTAGTAAATTGCATCTAGAGTGAAACAGAGGCTCAGGTAAATGGTATATAA AGAATAAAATTTGGTGATTTCTCTGTACAGTTTTCCCTTGCATTCCATCTATCTTGTGTTCCTTATTTTACAAGAAAAGA GGTGCCTTATCAGGTCATCAGTTAGTTACTTAGTTTTGCAGATTTTTAGTATTTTTTTAAATGAATATAATTGATTTTGG ATAATTCTGATTCTTGAGTTAAATTTTCATGTTGCTTTGGCTTTTGGTTCGTAATACTACTCAAAATTATATTTTATTGA TTATTGATATGCTCTATGGTAGTAGATTGGTCCTGAATCTGCACGGAGCAAACTTGCCCTTTAATTGATAGCAAATCATT GTCATTCATGTGTAATGCTTCTCAAAGTATTATTTCTTATCACAATTATTTAAAGAATGTATTTTACTGTTAAATAGGTT CGAGCTGGAATAGTTGGATATCCTAATGTTGGAAAATCATCTTTGATCAACCGTTTGTTGAAGCGAAGAATGTGCCCAGC AGCTCCTAGGCCAGGAGTAACTAGAGAATTGAGGTAAGTTGCTAATTTTATTTATTTATATGTTGATGAATTTATTTGTA GTTTCTTTAACTTGTTACTTGACAGAAACCTTGGTACTGTTAAGTTTGTACTGTGTCTGATATTGAATGTTATCTATAAC CCCCTCTGACCTCTAAAATGGCTAAAACTTGAACAAACTTCAAAATCTAATGGGTGCAACCTGTTTCCTGACATCAGAAC GATCTAATGCTGAAAAATATAGCTTATGTGGTTTTCTTTGCTCTCAACAGATGAAACGCTAATGGTGATATATTCTGTTT AAGTGCTAATCCTGCGAAAGTATATCACATTTAATTTGTTCTGACTAAAATTCTGAGCTCAAACAGAAAATAGTGGTGGA TTTCTTATTACTCATATACTGAAAATTCATAAATAATTATATTCCATTATTAATCTGATAGGTGGATTCGTTTTGGGAAA GATCTTGAACTTCTGGATTCTCCTGGGATTCTCCCGATGCGAATCAGCGACCAGTCATCAGCTATCAAACTTGCCATATG TGATGACATTGGAGAGAGGTCCTATGATGTGACTGATGTTGCTGCAGTTCTTGTACAGATGCTAACAAAGCTTCCTGCAG TAGGTATGTATCATGACATGCAGCCAAAGTGGAATACCATTTTGGCTAACAAAAAAATGACAGGTTCTGTATCTCAGAGA ATGGATGGGTTTCCTTGTCATAGTATCTTATTTAGAAGATCGATGCTGAAAATTTTCTACTGCCATTTTGCATAGTGCTT CACTTTTTTTTCTTCCAATTTGTGTTAGGAACCAGAAAATCTAGACGAAAGATTGAAGGAAAGAACGAAAAGAATGAAAT TCTATAATAAAATTTAAGCATAGAAATGGAGAATGAATTCTCCCCTAGGATTTCCCCTTCTGAAAGGATATCTCCTTTTA ATCACAAACTAATAATGATACTGAATGATCTCCTCTACTCTCTCTATCCCCTATTTATAAACCCTGCTTACTATTAACTA ATCACAAAAAGATCCCCTAATTACTTTAAAAGTCCTTACTATTTTTCCCTTTCTTTTAAATCCTAACAGTTAGCATTCTG TAATTTTATATTCTAATCCAGGTTGGGATCAAGATTACATTGTTCAGTCCACCTTCCATCCTTCAAACTCGTATATAATT CTAAGTTTTTGTTCAATGCAGGTGGAGATGCTCTTCGTAAGCGATACAAGATTAATGTAGATAGTCAGTGTGGTAAAACG TATGCCCGTATTTTTGTTTTCTCTAGTCACATTAATTTACTTGGTCAGACAGTGGTCATGTCTTCATATTTTTAAGTGAT TTCTGCTTAATTTGATATCATGTATTGGCTAATTTGCAGGTTCGTAGAGAAGCTGGCGCTCCAATTGTTCAACGGAGATT TTCACCAAGCATCATTTCGGGTTTTGTCAGATTTTAGAAAAGGTAAGTTTGGTTGGACTGCACTGGAGAGGCCTCCTAGG TGATGTCAGGTTCTTTTGCTCCTACAAGCAGGGCTTCTGTGAAGCTTGATCTGAAAAAGTTTGGTGGAGACCTGTGGAGA CCTCCAGGAGCTGAATGCAGAACTCAATCCCTCGCGGTGATAAATGAATGCATGTGGATGATATATGTGAATGACATTAT GGAAGGGAAAGGCTGACATGGCTAAAAGCTTTGCAGATTTGAGGTCCAAGAAACAAAGGATTTGAAGCAATAAATGCTTC TTGTTATTACCATGTAATTAGTGGGTGATTGGTCTCGTGTAACTTGTGTAAACAACTAGTGGATACAATTAGTTGGTCTA TACAACTAGTGTGTCATAGTGAGTTTGTATGCATCATGAATATGGTGTTGTATATCTATAATTGATATATTGTGATGTTG ATTCAAACATATTTGAACTAAGTTTTTTTTTCTTCTACCCCTACCCATCGGAATATTTCCAAATGGTGATTGCCCTTTGC TCGCTGGCCATATTTAAGCTCCCTAAGATGAGATTTTACTATTTTAGTACCCTTTTCTATTATGAGAGTTAACTCAACTT TCTATCCAATGGTTGTAGAATTGAACAAGGAATTGTATCATTGAGAATGCCCTTATAAAAGTGATTTTTTTTCCACTGAG AATAATTCATTCTGGTAGCGAG
CDS sequence (LotjaGi1g1v0727500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGATGAGTGTTCAGCTATCATCTTCATCAGGCTTGTGGGTACCCAACTCTCCACACCGTGTTCCCAGCCGAGGCAA ACCCGGGTCCCCATCAGCTCTCGCTGCCACACCACCAACACTCTCATCTCAACCTCCCACCATTCAGATAGTAGGGCTGA GAGGCCCTAGTTGGAGTGAAAATGGAATTGCCAATCCCAATAGCAATACATTTGATGGCTGTGAAGGAGAGAATAATCTT TGGTCTGAACTTGACACTGATCTTTATCATTGGACAAAGGCCTTACGCCCCGTGCAGTGGTTTCCTGGACATATTGCAAA AGCAGAAAAAGAGCTGAAGGAGCAGCTCAGGTTGATGGATGTTGTGATAGAGGTGCGGGACGGGCGAATTCCTATGTCCA CAACTCATCCTCAGATGGATCTATGGCTTGGTAATAGAAAGAGAATTCTGGTTTTAAATAGAGAAGACATGATATCAACT GAAGACCGTAATGCTTGGGCAGAGTATTTTACTAGGAATGGCACAAAGGTTGTCTTCTCCAATGGGCAGCTTGGAATGGG CACAATGAAGCTAGGCCGGTTAGCAAAGGAATTAGCAGCTAATGTAAATGTTAAACGCAGAGCCAAAGGACTACTTCCTC GTGCGGTTCGAGCTGGAATAGTTGGATATCCTAATGTTGGAAAATCATCTTTGATCAACCGTTTGTTGAAGCGAAGAATG TGCCCAGCAGCTCCTAGGCCAGGAGTAACTAGAGAATTGAGGTGGATTCGTTTTGGGAAAGATCTTGAACTTCTGGATTC TCCTGGGATTCTCCCGATGCGAATCAGCGACCAGTCATCAGCTATCAAACTTGCCATATGTGATGACATTGGAGAGAGGT CCTATGATGTGACTGATGTTGCTGCAGTTCTTGTACAGATGCTAACAAAGCTTCCTGCAGTAGGTGGAGATGCTCTTCGT AAGCGATACAAGATTAATGTAGATAGTCAGTGTGGTAAAACGTTCGTAGAGAAGCTGGCGCTCCAATTGTTCAACGGAGA TTTTCACCAAGCATCATTTCGGGTTTTGTCAGATTTTAGAAAAGGTAAGTTTGGTTGGACTGCACTGGAGAGGCCTCCTA GGTGA
Protein sequence (LotjaGi1g1v0727500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAMSVQLSSSSGLWVPNSPHRVPSRGKPGSPSALAATPPTLSSQPPTIQIVGLRGPSWSENGIANPNSNTFDGCEGENNL WSELDTDLYHWTKALRPVQWFPGHIAKAEKELKEQLRLMDVVIEVRDGRIPMSTTHPQMDLWLGNRKRILVLNREDMIST EDRNAWAEYFTRNGTKVVFSNGQLGMGTMKLGRLAKELAANVNVKRRAKGLLPRAVRAGIVGYPNVGKSSLINRLLKRRM CPAAPRPGVTRELRWIRFGKDLELLDSPGILPMRISDQSSAIKLAICDDIGERSYDVTDVAAVLVQMLTKLPAVGGDALR KRYKINVDSQCGKTFVEKLALQLFNGDFHQASFRVLSDFRKGKFGWTALERPPR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 17 | 17 | - | – | |
| MobiDBLite | 1 | 46 | 46 | - | – | |
| PANTHER | 68 | 374 | 307 | 5.3E-169 | – | |
| PANTHER | 68 | 374 | 307 | 5.3E-169 | – | |
| Gene3D | 98 | 271 | 174 | 8.0E-43 | – | |
| TIGRFAM | 98 | 370 | 273 | 6.5E-81 | ||
| CDD | 100 | 271 | 172 | 1.70495E-80 | – | |
| SUPERFAMILY | 104 | 287 | 184 | 6.2E-40 | ||
| PRINTS | 218 | 238 | 21 | 1.5E-6 | ||
| Pfam | 218 | 288 | 71 | 2.3E-15 | ||
| PRINTS | 264 | 279 | 16 | 1.5E-6 | ||
| Gene3D | 276 | 364 | 89 | 1.0E-9 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | GTP binding | Interacting selectively and non-covalently with GTP, guanosine triphosphate. |
Expression pattern of LotjaGi1g1v0727500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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