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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0729700 |
| Transcript ID | LotjaGi1g1v0729700.4 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Kinase family protein; TAIR: AT1G73690.1 cyclin-dependent kinase D1;1; Swiss-Prot: sp|P29620|CDKD1_ORYSJ Cyclin-dependent kinase D-1; TrEMBL-Plants: tr|A0A1J7HGF0|A0A1J7HGF0_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0729700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:130141737..130145835) extracted from Lotus japonicus Gifu genome v1.2.
ATGGCAGAAAACGATCCGTCGAAGAAAGTAGCCGATAGGTATCTCAAGCGTGAGGTCCTTGGTGAAGGTACCTATGGTGT CGTCTACAAAGCCATTGATACCCAGGTAACTTTTCTCTTTCTTTCTACTCTTAACTTGTTTTGCGTAGTGGTAATTGTGA TGTTTTTTCAGTTTCAGTGGATAAAATTAGATTTTCATGTGTATTTTCTAGGTGGGTTGTGAGAATTAGGTCTATAAATT AATTAAATTTGATGAGATAAGTTTCAACATGTTATAGTTTATGATTTGATTTCAAAATGGGTTTGGCAAAGTGTCCTGTT CTTCTTGAGAATTCCAAAAATTCAGCTGGAGATGTGTTGCTTACATGAACTAGATATGTGTCCCCGAAGGTTAGCTCAAG TGGTAAGAGCTAGGGGACATAAGGGTTTGGGAGGGTGGAGGGTGGAGGGTGAAGGGTGAAGGGTCTAGGGTTCGAACCCT GAGGATGACTAATTTACTAACATTACTAACAACTAACATTTGCCTATAAAAAAAAAAAAGAACTAGATATGTTGCTTACA TGAACTGGCCTCTATTCAATAATGAAGATGGGGTGCTTTAGTAGTCTAGTGCTATTAGGTCTATAAAATTTTCTGTGATG TGAGAATAGTGTTATCAAATAGCGGCTATAGCGGCCGCGACCCACTATAGCGTAGCGGATTTTAGGGCCACCGCAATCGC TACGCCGCGACATAGCGGCCACCGCGAGAAACGCAATCGTGGCCGCGACGGCCATAGCGGCGCTGGAAGCTGAAGCGGAA ATAGCGGATTTTGAGGAATACTGCATGTTTTTTAATTTTTTAGGGTTTTTAAATATGGTAATTCTTGACTATTGGGCCAC CGACTGCCCAATTAACTCCCCATTAATTCTTTTTTTCTATATTTATGCTTCATCATGAAGAATAATCACGGCAGAATTGG AAAGGTTTACAAAATCCTAATTCTCCTTCTCTCATCCTCCTTCTACAAGCCCAATTAACTCCCCATTAACTCCCCATTAA TTCGTTTTTGTTGGATTTCCTTTTTCTGTTTCTCTGTTTTACTGCCCAATTAACTCCCCATTAATTCGTTTTTGTTGCAT TTCCTTTTTCTGTTTCACTGTTTTAAGACTTGTGTTTGGTTTATGTTGCTTTTAGTCTTTGGACATTTGTTTTGAGCTGG TGGCTGCCTTTAATAATTAACATTTGGTTGTTAAAATGATGATTTTATGCAGTTTCTATTATTATGTGATAAGCTGTTGT TTCTTATGCAGTTTTTATTTGTTCATTTCAAATGTTTCTGCTCTAGTATTGCAATAGATGTCTGATAAGCTGCTGTTTTT TATAATATTTTACTTATTTTAACCGCTATGTGGTTTCCGCTATTTGCCCGCGACGCTATCCGCTATATGAAATAGCGGAG TTTGGCCTCGCCGCGATGGTCCGCTATCGCGATTTGATAACACTGTGTGAGAATTAGGTCTATAAATTAATTTGATGAGA TGAGTTTCAACATGTTATAGTTTATGATTTAATTTCAAAATGGGTTTGGCAAAGTGTATTGTTCTTCATATCACTTGCAA TTGAGAATTCCAAAAGTTCAGCTGGAGATATGTTGCTTACATGAAATGGCCTTCTATTCAATAATGAAGATGGGGTGCTT TAGTAGTTTAATGCTATTATATTTGTTATTTTGTGGTCTTTGTAATGATGTGCTCATTGCATGGACAGACAGGACAAACG GTTGCCATTAAAAAGATTCGGCTTGGCAAGCAGAAAGAAGGGGTGAATTTTACAGCTCTTAGAGAAATTAAACTGCTTAA AGAGCTCAAAGATCCAAACATTATTGAGTTGATTGATGCCTTCCCGCATAAAGGGAATTTACATCTTGTATTTGAGTTCA TGGAGACAGACCTCGAAGCTGTCATAAGAGACCGGAATATTTTCCTTTCTCCAGGAGATATTAAATCTTACCTTCAAATG ACGCTAAAAGGCCTTGCTGTCTGCCACAGGAAATGGGTTCTGCATAGGTAGGTTTTATTGCTAATTTGCTCATTACAAAA TTGTTACCTGCCTTTAGTTCTGAGCTGAATAGTTCGATTATGTATTTTCAGGGATATGAAACCAAACAATTTGTTGATAG GACCTAATGGACAGCTGAAACTTGCAGATTTTGGTTTAGCACGGATATTTGGAAGTCCAGATCGCCGGTTCACTCATCAG GTTGGTTTCGTTATAAGTATCTCATGCATTGCACAAATTTTCTTTAAATTTAAAATCATATTAAAAGAAAATATTTGACA GATAGAGTATTTAAAACTATAAAGGAAATATGTGTGAGTTATGGAGATGAGACATTTTAAATTTTGAGGATTGAGGAAAA CTATGAAAAGAAATTGTGTGAATTAAGACATGCCATCATTTTTTAGTTAGGTTTGACTTATATGATGCTTTTGTTTGTAT TTATACAAAAACAAAGGGTGTAAGAACTCAATGTTTTCCTCTTAAATCTCCACTATTATTGCCTTCTCTGTCCCAGAACT ACAAGAGAAGGAAATGGAGTACTAGGTTTAGGTGCATGTGTTCTATGATTGTGGTTCTCTAGGATAACCATCTCTTGCTG TAACTATGAAGAGTGGAGTACTGTTGAACTAGTAGCTTCGTACTTACTAACTTATATGGGATAAAAATGATTCTCTTGGA ACCCTTGCTTCCTTCCAATTTAGTGGTCTCTTCTACATCTTAGCTTCTGTCTAATATTGAACATGGCATGTTTTATTCTT ATATTTGTATTTTGCACTTTCTCTTAATGGATCTACAGAGTTGACACTTATGCATGAATAGGTGTTTGCTCGGTGGTATA GAGCACCTGAGCTATTATTTGGTACAAAGCAGTATGGTTCAGGGGTAGATGTTTGGGCTGCAGCTTGTATATTTGCGGAA CTCCTCCTTCGTCGTCCTTTTCTTCAGGTAAACCGAGATTGTTCTGAACATTAGGTTGTATATGAAATGTATTTTACGGT AAATCATTAATATTGATGTTCCGGAATGATGGATTTTTTATTGGCCATTTTAACTGTGCAACTTTTTATTGAGGAATGAA GTTGACCATTTAATTTTATCATTCGTCTGAATAAACCCTTCAAAGATGTTTTACTTAACTGCGATTAGTTTCAAAGCTGT TGGCTATGGTATTTATAGACATTATCGACTTTTAATTTTGGCTTTCATCTTTTTCCTGTTTTAATATCTTTTATCTAGCT GTTTTTCTTTTACAATATTTAAGTGATTAGATGTCATGTATTGCATTGGTTGATTTCACTCTTTTATTCCTTTTTGCTTA AGCATCTTTCTTCTAGTAAATTTATGAGTTTGCTTTAACATTTCGTAGGGTTCAAGTGATATTGATCAATTAGGAAAGAT TTTCGCAGCGTTTGGAACTCCTTCACCTTCCCAGTGGCCTGATATGGTTTACCTTCCTGATTATGTTGAATACCAATATG TCCCTGCTCCCCCTTTGCGTTCTTTATTTCCGATGGCAAGTGATGATGCTTTGGATTTGTTGTCAAAGATGTTCACATAT GATCCAAAGGTTAGAATTTCCGTGCAGCAGGCATTAGAACATAGGTATGTGCCTTAAACATCCCATATAGAAGAAAAAAA GTTTCCTTCCCTTTTCCTAATTTTAATGTCTCTTCTACTGTAGGTACTTTTCTTCTGCTCCTCTGCCTACAATTCCAGAT AAGCTTCCTAGACCTGCCCCTAAGAAGGAGTCTAGGGCTTCAGATTTCAATCCTCATGAGGGTCCTACTGTCTTATCACC TCCAAGAAAGTCTAGGAGAGTGATGCCAGGGCGTGATGGGTCTGAAGGAAATTCTTTGCAAGAGGCGGATAAGGTTGATG ACAATGTTGGTAATTTCAGACAGACAGCCGGTGATAATACAGGCAAGAGTGAGCCGGCGCCAATGTCTCTAGATTTTTCT ATATTTGGAATAAAACCTCCAAATAGACCAACAATTAACAGGTAAGACTGCATTGATCATGCAATCATTTCAAAATGACT TATAATTTGCATTTTGTAA
CDS sequence (LotjaGi1g1v0729700.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCAGAAAACGATCCGTCGAAGAAAGTAGCCGATAGGTATCTCAAGCGTGAGGTCCTTGGTGAAGGTACCTATGGTGT CGTCTACAAAGCCATTGATACCCAGACAGGACAAACGGTTGCCATTAAAAAGATTCGGCTTGGCAAGCAGAAAGAAGGGG TGAATTTTACAGCTCTTAGAGAAATTAAACTGCTTAAAGAGCTCAAAGATCCAAACATTATTGAGTTGATTGATGCCTTC CCGCATAAAGGGAATTTACATCTTGTATTTGAGTTCATGGAGACAGACCTCGAAGCTGTCATAAGAGACCGGAATATTTT CCTTTCTCCAGGAGATATTAAATCTTACCTTCAAATGACGCTAAAAGGCCTTGCTGTCTGCCACAGGAAATGGGTTCTGC ATAGGGATATGAAACCAAACAATTTGTTGATAGGACCTAATGGACAGCTGAAACTTGCAGATTTTGGTTTAGCACGGATA TTTGGAAGTCCAGATCGCCGGTTCACTCATCAGGTGTTTGCTCGGTGGTATAGAGCACCTGAGCTATTATTTGGTACAAA GCAGTATGGTTCAGGGGTAGATGTTTGGGCTGCAGCTTGTATATTTGCGGAACTCCTCCTTCGTCGTCCTTTTCTTCAGG GTTCAAGTGATATTGATCAATTAGGAAAGATTTTCGCAGCGTTTGGAACTCCTTCACCTTCCCAGTGGCCTGATATGGTT TACCTTCCTGATTATGTTGAATACCAATATGTCCCTGCTCCCCCTTTGCGTTCTTTATTTCCGATGGCAAGTGATGATGC TTTGGATTTGTTGTCAAAGATGTTCACATATGATCCAAAGGTTAGAATTTCCGTGCAGCAGGCATTAGAACATAGGTACT TTTCTTCTGCTCCTCTGCCTACAATTCCAGATAAGCTTCCTAGACCTGCCCCTAAGAAGGAGTCTAGGGCTTCAGATTTC AATCCTCATGAGGGTCCTACTGTCTTATCACCTCCAAGAAAGTCTAGGAGAGTGATGCCAGGGCGTGATGGGTCTGAAGG AAATTCTTTGCAAGAGGCGGATAAGGTTGATGACAATGTTGGTAATTTCAGACAGACAGCCGGTGATAATACAGGCAAGA GTGAGCCGGCGCCAATGTCTCTAGATTTTTCTATATTTGGAATAAAACCTCCAAATAGACCAACAATTAACAGGTAA
Protein sequence (LotjaGi1g1v0729700.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAENDPSKKVADRYLKREVLGEGTYGVVYKAIDTQTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKDPNIIELIDAF PHKGNLHLVFEFMETDLEAVIRDRNIFLSPGDIKSYLQMTLKGLAVCHRKWVLHRDMKPNNLLIGPNGQLKLADFGLARI FGSPDRRFTHQVFARWYRAPELLFGTKQYGSGVDVWAAACIFAELLLRRPFLQGSSDIDQLGKIFAAFGTPSPSQWPDMV YLPDYVEYQYVPAPPLRSLFPMASDDALDLLSKMFTYDPKVRISVQQALEHRYFSSAPLPTIPDKLPRPAPKKESRASDF NPHEGPTVLSPPRKSRRVMPGRDGSEGNSLQEADKVDDNVGNFRQTAGDNTGKSEPAPMSLDFSIFGIKPPNRPTINR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 5 | 94 | 90 | 1.2E-30 | – | |
| PANTHER | 5 | 397 | 393 | 5.0E-203 | – | |
| PANTHER | 5 | 397 | 393 | 5.0E-203 | – | |
| SUPERFAMILY | 10 | 301 | 292 | 2.7E-95 | ||
| CDD | 13 | 307 | 295 | 0.0 | – | |
| SMART | 14 | 294 | 281 | 5.0E-94 | ||
| ProSiteProfiles | 14 | 294 | 281 | 44.032 | ||
| Pfam | 16 | 294 | 279 | 3.7E-70 | ||
| ProSitePatterns | 20 | 44 | 25 | - | ||
| Gene3D | 95 | 310 | 216 | 1.3E-64 | – | |
| ProSitePatterns | 132 | 144 | 13 | - | ||
| MobiDBLite | 300 | 398 | 99 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi1g1v0729700.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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