Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0730300 |
| Transcript ID | LotjaGi1g1v0730300.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | BTB-POZ and MATH domain protein; TAIR: AT3G06190.1 BTB-POZ and MATH domain 2; Swiss-Prot: sp|Q9M8J9|BPM2_ARATH BTB/POZ and MATH domain-containing protein 2; TrEMBL-Plants: tr|I1JNR6|I1JNR6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0730300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:130197123..130201732) extracted from Lotus japonicus Gifu genome v1.2.
ATTCCATTTTCTTATTTCTCCGAAAATCATAAATAAACTCTTATTTAAACCCTCTCCTTCTCCATCATCTCATTCATCCC AAGCCTTTATCCGTCATTTCATTCATTCTCTCTCTCTCTCTCTCTCTGAGAAATCGAAATTCGAAACCCTAGAAATTCAT CATCCAGAATCTGAACAATTCCCAAATCGAACCTCTAGATTCTCTCATCAAACCCCACTTCGCTCACCTCAATTTCACCC ATCGATCCCGATCCTGATACGGTGGCTCGCGCATGGGTAAGATTCTCCGAGAAACCGCGAGGCCATCTTCCTCCAGTTCC GCCCACCCATCATCCTCTTCCGATCCGGCGACGACCTCGTCGACGTCGATAACCGAGACGGTGAGAGGCTCCCACCAGTT CAAGATCACCGGGTACTCGCTCTCCAAGGGAATCGGGATCGGGAAGTACATAGCTTCCGATATTTTCACGGTGGGTGGGT ACGATTGGGCGATTTATTTCTACCCTGATGGGAAGAGCCCTGAGGACAATGCCTCCTATGTTTCCCTCTTCATCGCGCTT GCCAGCGACGGCACCGACGTTAGGGCGCTTTTCGAGTTGACCCTTTTGGATCAGAGTGGCAACGAGAGGCATAAGGTGCA TAGCCATTTCGAGAGGACTCTTGAAAGCGGGCCTTACACCTTGAAATACCGCGGTAGTATGTGGTAGGTTCTGTTCAGAA TTTTTATTTTTATTTTCTTTTCGTCATGCCCTTGTTTTGTTTTTCAGTTTTTCAGCTTGCTTGTTCTTGATTTCGTTGAA TTTGGTCTAAAAAAATTAATTTTTAGCTTGGGTGTATTTTGTTAAGTTTAGAATTCGAAATGTTAGCTTGTGGGTAATAC TTGTGTCTTGAAGCAGCTATCATGGTTCACCCTTGTAGTTTGCATGTAGAATTTAAGTATTTAGAGTTTAAAATGTGTGT TGGATATGGCTGTTGTATGCCAAGTTGTGGGATAATTTCCTTGTGCAGTGAAATGGTAGGTTTGATGAGGTGCCCTGTTA TTTTACTATTTGTCTGATTGAGTAGGAATGATTCAAGGGTGAAATCTTTCGTCTTTTGATCCATCGAATTTGGTTATGGT TGGGGATGTTGTGGTTAAGGGATGATGGGAATGATAATTTGAGAGAGGGGTGGTGGATGGGGAAGGGTTAATGATATTTG ATTAGTATCTTTTGAGAGAATTGTTTCTTGAGATATGTGTGAGCGGTCTTGCTTGTACAATTTGTGCACACACTCACAAC TGCTTGTCAGAAATGAATCCTTACAGTTTGGTAAATGCTTGATTGTTTGACACTGGGTTTTGCAGGGGTTACAAGCGGTT TTTTAAGAGAACAGCTCTAGAGACATCGGACTACCTTAAAGATGATTGCCTTAATGTGAATTGTAGTGTTGGTGTTGTGA GGTCTTTTACGGAAGGCCCTAAAATCTATTCCATAGCAATACCGCCTTCTAACTTTGGTCAGCAATTTGGGCAATTGCTG GAAAGTAGTAAAGGAAGTGATGTTAGTTTTGAAGTGAATGAGGAAATGTTTGATGCTCATAAATTGGTGCTAGCAGCTCG ATCACCTGTTTTCAGAGCCCAGCTTTTTGGTCCTATGAAAGATCACAATACCCACTGTATTAAAGTTGAAGACATGGAGG CTCCAGTTTTTAAGGTTTGATTTAATGTTCTTTGTACTTCGTATTATTCATGTGATATTTGTTTGTAATGTGGTCTCTGA ATATATGGTTTTGGTTTTTATTTTAGTCCATATACTAACCAGACACACTGTGCTTCATGATTTTTATTTTTATTTGCATT CCCCCCCCCCCCCCTTGGCTTTTCCTTATAAATCCATCGTTAAGCCTATGTCTTACTTAATACATACCCACTCCTACAAT CTGGTTCATAAATTAGTCTGGTGTGTTGTTCTGAAATGGGTATGCAAAAAAAAATTGCATGATGGTCTCGTCTCAATCTC TGACTCTTTTGTGGCTTCTCCCTTTGTGAGTAGAACACACATTTCATTCTAATGCACCGTTTTTCTTATGAAAGGTCATA GTTCATTTGTAAATTAAAAAATTCTATGGTATACACCTCCCCAGATGATGTATTAGGAACCCATGAGTCAGAATTGGCCG AATCTATTGTTATTGAATGTGAGGTGTGATCAGAATAGGAGACAATCTCCTCCAAGAGTTTCCCCTTTACAATTGACACT TCACTGAGATGACATGTATCTTTCAAAAATACCCAGGGTAAAAAAGAAGCAAGGGAGACTGAGGTTCTCATATTTTTTTA TGGGCTTGATTTCGTTCTTATTTTGTAGGTTCTCCTTCCATAAGTTTCACCAGCTGGTTCTGATTATTTAATTGATAAAG CTGTAAATATAATATCATCTTGTTGAGTTTGAAACACGAATTCAGGCATTAAAGTAAATTTTGTATTTATCATATTAATG TATGAGCTTGCATCTATATTTGGCTGATCAACATGGCCTTTTTGTCACGGGAAGAAGTTATTTGGCTGATCTTCGTCTTT GAGGTTATAAACATCATCTGATGTATCATGTAACATAATATCCTAATTAATCTTAAATATGTGGATAAAATTGTTTGGTA ATGACAATAGAATTGGAAAATTTCCTTCATTGATTTCTTGTGGAGGAAATTTCATTGTTTTTCTTTTTTGTGAATACATT GTTTGAATTACTCCATTTGGTTTCTATTTAGTTGCTACACGCAGGACTTCTGTTTTGTCTAACATGAGACAAATTAGATA GAGCAATGTGCTTATGACTAACAGCTGTGCCTTTCTGTTTTTTCTATATTTTGCAGGCATTGCTTCATTTTATATACTGG GACTCCCTACCTGACATGCAGGAGCTTACTGGGTTGAATACCAAATGGGCAACGACCTTGATGGCTCAGCATCTTCTAGC AGCAGCTGATCGCTATGGCTTAGAGAGACTTAGACTGATGTGTGAAGCAAGTCTCTGTGAAGATGTTGCAATAAATACTG TGGCTACAACTTTAGCCTTGGCAGAGCAGCACCATTGTTTCAAGCTTAAAGCAGTCTGTCTCAAGTTCATTGCTAGCTCC GAAAATCTCAGAGGTTTGTTTTTTTCCCTGAACTTCTACTCCCTACAAGTTAGTGCTATATTTGGAGTAATTGTGACACT AGAATGTCTGAAAACCTGTAGTTAACTATAATTCAAGTTAAATTTGTTACTGAGTGTTGACAATGAAGCTTGTCTGTCAG CCTGTCCCTGTTACATCATCCAGTCTGAACTTAAAAAAATGCTATGCTGTGAAGTGGTTTTGCTTTAATGCCACCATCTT TTCCTTACTCTTCTATATACCACTAATCTCATGCAATTATCCCAAGTTGACCTTGAACCAGTATCCCCTTATTAATACTT TTATTGTACCTCTTAGGGAGGGGTTTCTGCCTCTCTACTTCCTTATGCCTCTTCTAAAACAGTATTGTTATCAGAAATGA AAACAAATATGAGTGCTTAGATTATGGAACAATTAGTGTATAGTGTATACATTCGAGGATATCAGTCTAACTTCCGGGTG AAATATTTGATATTCACATGGCATAGGATAGTTACTGATGGCTATTACCAAAACTCTGTTGTAAATTTATCTGGACTAAT TTGGCTTATTGATATTGGTGCCATTTTTCATTTTCATAGAGAAATATAATTATCAACTGAACTATTTCTATCCTTTGATT CTTCAGCTGTGATGCAAACTGATGGATTTGAGTACTTGAAGGAAAGCTGTCCCTCTGTGCTGACTGAGCTGTTGGAGTAC GTGGCTAGATTTACTGAGCATTCGGACTTTATGTGCAAACATAGGAATGAAGCAAATCTTGATGGCAGCGACATTAATGG GAGGCGGGTGAAGCAAAGACTTTAGTGTGAACAGCTTTCTGTTTAACCCTCTTCCCCGAGAGCAGCCATAGTTAGCGGGA GATGATAGTCTTTTATAGGATTAGGGGCAATTGTTAATCTTCTTGGCTTATTCATGTGTAACTGTGTAAGAGGTGTAAAT GTAATTTGTGCTGGTGCTGTTATGTTTGATTGACGTAGGTTTCTGTAATATCTGAAGTATTTCGTGGAATAACATTTGTC TGAAAATCACTGCTCCTTTGTTTCTGGATTCTTTTACTTTAATATTCTATTCTGTATGGTTCTTCAATCTAGTTCTCATT GCTGTTCTTCTTTTTCATTTTACTGTAAGAGGGGTGAGAAGGTGATGGAGGAAGATACTCAATATAGTGATTCTAAGAAC AATGAACGAGCAGTTGGGAAGATAACCTTGTTGGTGAGAAGAATAAGGATACACTTCTTAATTTTCATTTTTCAATTCAA TGAATTTAAAAATCAATTTATGATGTAAGATTATAGGGGAGGTTTGTGTAAAAAGTAAAAACCCTCAGTTGAGGGGGGAT TTGTTTGCAGTTGTACAGTTTTAACCGGTCTAATGACTTATAATAGCCAATGACTTTTTGTGACTCTTGATTTCCTATCA AATCCTAGAATTCACCTTGTTCTCTTTCCTTGTTTTTATGTATGTTTAGG
CDS sequence (LotjaGi1g1v0730300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGTAAGATTCTCCGAGAAACCGCGAGGCCATCTTCCTCCAGTTCCGCCCACCCATCATCCTCTTCCGATCCGGCGAC GACCTCGTCGACGTCGATAACCGAGACGGTGAGAGGCTCCCACCAGTTCAAGATCACCGGGTACTCGCTCTCCAAGGGAA TCGGGATCGGGAAGTACATAGCTTCCGATATTTTCACGGTGGGTGGGTACGATTGGGCGATTTATTTCTACCCTGATGGG AAGAGCCCTGAGGACAATGCCTCCTATGTTTCCCTCTTCATCGCGCTTGCCAGCGACGGCACCGACGTTAGGGCGCTTTT CGAGTTGACCCTTTTGGATCAGAGTGGCAACGAGAGGCATAAGGTGCATAGCCATTTCGAGAGGACTCTTGAAAGCGGGC CTTACACCTTGAAATACCGCGGTAGTATGTGGGGTTACAAGCGGTTTTTTAAGAGAACAGCTCTAGAGACATCGGACTAC CTTAAAGATGATTGCCTTAATGTGAATTGTAGTGTTGGTGTTGTGAGGTCTTTTACGGAAGGCCCTAAAATCTATTCCAT AGCAATACCGCCTTCTAACTTTGGTCAGCAATTTGGGCAATTGCTGGAAAGTAGTAAAGGAAGTGATGTTAGTTTTGAAG TGAATGAGGAAATGTTTGATGCTCATAAATTGGTGCTAGCAGCTCGATCACCTGTTTTCAGAGCCCAGCTTTTTGGTCCT ATGAAAGATCACAATACCCACTGTATTAAAGTTGAAGACATGGAGGCTCCAGTTTTTAAGGCATTGCTTCATTTTATATA CTGGGACTCCCTACCTGACATGCAGGAGCTTACTGGGTTGAATACCAAATGGGCAACGACCTTGATGGCTCAGCATCTTC TAGCAGCAGCTGATCGCTATGGCTTAGAGAGACTTAGACTGATGTGTGAAGCAAGTCTCTGTGAAGATGTTGCAATAAAT ACTGTGGCTACAACTTTAGCCTTGGCAGAGCAGCACCATTGTTTCAAGCTTAAAGCAGTCTGTCTCAAGTTCATTGCTAG CTCCGAAAATCTCAGAGCTGTGATGCAAACTGATGGATTTGAGTACTTGAAGGAAAGCTGTCCCTCTGTGCTGACTGAGC TGTTGGAGTACGTGGCTAGATTTACTGAGCATTCGGACTTTATGTGCAAACATAGGAATGAAGCAAATCTTGATGGCAGC GACATTAATGGGAGGCGGGTGAAGCAAAGACTTTAG
Protein sequence (LotjaGi1g1v0730300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGKILRETARPSSSSSAHPSSSSDPATTSSTSITETVRGSHQFKITGYSLSKGIGIGKYIASDIFTVGGYDWAIYFYPDG KSPEDNASYVSLFIALASDGTDVRALFELTLLDQSGNERHKVHSHFERTLESGPYTLKYRGSMWGYKRFFKRTALETSDY LKDDCLNVNCSVGVVRSFTEGPKIYSIAIPPSNFGQQFGQLLESSKGSDVSFEVNEEMFDAHKLVLAARSPVFRAQLFGP MKDHNTHCIKVEDMEAPVFKALLHFIYWDSLPDMQELTGLNTKWATTLMAQHLLAAADRYGLERLRLMCEASLCEDVAIN TVATTLALAEQHHCFKLKAVCLKFIASSENLRAVMQTDGFEYLKESCPSVLTELLEYVARFTEHSDFMCKHRNEANLDGS DINGRRVKQRL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 35 | 35 | - | – | |
| MobiDBLite | 8 | 35 | 28 | - | – | |
| PANTHER | 19 | 391 | 373 | 1.4E-241 | – | |
| PANTHER | 19 | 391 | 373 | 1.4E-241 | – | |
| SUPERFAMILY | 35 | 174 | 140 | 3.11E-36 | ||
| Gene3D | 36 | 176 | 141 | 5.8E-33 | ||
| ProSiteProfiles | 38 | 172 | 135 | 23.536 | ||
| CDD | 39 | 172 | 134 | 4.27841E-28 | ||
| SMART | 43 | 155 | 113 | 1.3E-9 | ||
| SUPERFAMILY | 185 | 315 | 131 | 3.92E-30 | ||
| Gene3D | 185 | 312 | 128 | 4.9E-44 | – | |
| CDD | 195 | 314 | 120 | 7.42242E-68 | – | |
| Pfam | 199 | 315 | 117 | 1.8E-24 | ||
| ProSiteProfiles | 208 | 267 | 60 | 16.445 | ||
| SMART | 208 | 317 | 110 | 7.2E-24 | ||
| CDD | 314 | 377 | 64 | 1.7898E-32 | ||
| Gene3D | 317 | 394 | 78 | 2.2E-21 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi1g1v0730300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…