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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0730300 |
| Transcript ID | LotjaGi1g1v0730300.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | BTB-POZ and MATH domain protein; TAIR: AT3G06190.1 BTB-POZ and MATH domain 2; Swiss-Prot: sp|Q9M8J9|BPM2_ARATH BTB/POZ and MATH domain-containing protein 2; TrEMBL-Plants: tr|I1JNR6|I1JNR6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0730300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:130197783..130201460) extracted from Lotus japonicus Gifu genome v1.2.
ATGGGTAAGATTCTCCGAGAAACCGCGAGGCCATCTTCCTCCAGTTCCGCCCACCCATCATCCTCTTCCGATCCGGCGAC GACCTCGTCGACGTCGATAACCGAGACGGTGAGAGGCTCCCACCAGTTCAAGATCACCGGGTACTCGCTCTCCAAGGGAA TCGGGATCGGGAAGTACATAGCTTCCGATATTTTCACGGTGGGTGGGTACGATTGGGCGATTTATTTCTACCCTGATGGG AAGAGCCCTGAGGACAATGCCTCCTATGTTTCCCTCTTCATCGCGCTTGCCAGCGACGGCACCGACGTTAGGGCGCTTTT CGAGTTGACCCTTTTGGATCAGAGTGGCAACGAGAGGCATAAGGTGCATAGCCATTTCGAGAGGACTCTTGAAAGCGGGC CTTACACCTTGAAATACCGCGGTAGTATGTGGTAGGTTCTGTTCAGAATTTTTATTTTTATTTTCTTTTCGTCATGCCCT TGTTTTGTTTTTCAGTTTTTCAGCTTGCTTGTTCTTGATTTCGTTGAATTTGGTCTAAAAAAATTAATTTTTAGCTTGGG TGTATTTTGTTAAGTTTAGAATTCGAAATGTTAGCTTGTGGGTAATACTTGTGTCTTGAAGCAGCTATCATGGTTCACCC TTGTAGTTTGCATGTAGAATTTAAGTATTTAGAGTTTAAAATGTGTGTTGGATATGGCTGTTGTATGCCAAGTTGTGGGA TAATTTCCTTGTGCAGTGAAATGGTAGGTTTGATGAGGTGCCCTGTTATTTTACTATTTGTCTGATTGAGTAGGAATGAT TCAAGGGTGAAATCTTTCGTCTTTTGATCCATCGAATTTGGTTATGGTTGGGGATGTTGTGGTTAAGGGATGATGGGAAT GATAATTTGAGAGAGGGGTGGTGGATGGGGAAGGGTTAATGATATTTGATTAGTATCTTTTGAGAGAATTGTTTCTTGAG ATATGTGTGAGCGGTCTTGCTTGTACAATTTGTGCACACACTCACAACTGCTTGTCAGAAATGAATCCTTACAGTTTGGT AAATGCTTGATTGTTTGACACTGGGTTTTGCAGGGGTTACAAGCGGTTTTTTAAGAGAACAGCTCTAGAGACATCGGACT ACCTTAAAGATGATTGCCTTAATGTGAATTGTAGTGTTGGTGTTGTGAGGTCTTTTACGGAAGGCCCTAAAATCTATTCC ATAGCAATACCGCCTTCTAACTTTGGTCAGCAATTTGGGCAATTGCTGGAAAGTAGTAAAGGAAGTGATGTTAGTTTTGA AGTGAATGAGGAAATGTTTGATGCTCATAAATTGGTGCTAGCAGCTCGATCACCTGTTTTCAGAGCCCAGCTTTTTGGTC CTATGAAAGATCACAATACCCACTGTATTAAAGTTGAAGACATGGAGGCTCCAGTTTTTAAGGTTTGATTTAATGTTCTT TGTACTTCGTATTATTCATGTGATATTTGTTTGTAATGTGGTCTCTGAATATATGGTTTTGGTTTTTATTTTAGTCCATA TACTAACCAGACACACTGTGCTTCATGATTTTTATTTTTATTTGCATTCCCCCCCCCCCCCCTTGGCTTTTCCTTATAAA TCCATCGTTAAGCCTATGTCTTACTTAATACATACCCACTCCTACAATCTGGTTCATAAATTAGTCTGGTGTGTTGTTCT GAAATGGGTATGCAAAAAAAAATTGCATGATGGTCTCGTCTCAATCTCTGACTCTTTTGTGGCTTCTCCCTTTGTGAGTA GAACACACATTTCATTCTAATGCACCGTTTTTCTTATGAAAGGTCATAGTTCATTTGTAAATTAAAAAATTCTATGGTAT ACACCTCCCCAGATGATGTATTAGGAACCCATGAGTCAGAATTGGCCGAATCTATTGTTATTGAATGTGAGGTGTGATCA GAATAGGAGACAATCTCCTCCAAGAGTTTCCCCTTTACAATTGACACTTCACTGAGATGACATGTATCTTTCAAAAATAC CCAGGGTAAAAAAGAAGCAAGGGAGACTGAGGTTCTCATATTTTTTTATGGGCTTGATTTCGTTCTTATTTTGTAGGTTC TCCTTCCATAAGTTTCACCAGCTGGTTCTGATTATTTAATTGATAAAGCTGTAAATATAATATCATCTTGTTGAGTTTGA AACACGAATTCAGGCATTAAAGTAAATTTTGTATTTATCATATTAATGTATGAGCTTGCATCTATATTTGGCTGATCAAC ATGGCCTTTTTGTCACGGGAAGAAGTTATTTGGCTGATCTTCGTCTTTGAGGTTATAAACATCATCTGATGTATCATGTA ACATAATATCCTAATTAATCTTAAATATGTGGATAAAATTGTTTGGTAATGACAATAGAATTGGAAAATTTCCTTCATTG ATTTCTTGTGGAGGAAATTTCATTGTTTTTCTTTTTTGTGAATACATTGTTTGAATTACTCCATTTGGTTTCTATTTAGT TGCTACACGCAGGACTTCTGTTTTGTCTAACATGAGACAAATTAGATAGAGCAATGTGCTTATGACTAACAGCTGTGCCT TTCTGTTTTTTCTATATTTTGCAGGCATTGCTTCATTTTATATACTGGGACTCCCTACCTGACATGCAGGAGCTTACTGG GTTGAATACCAAATGGGCAACGACCTTGATGGCTCAGCATCTTCTAGCAGCAGCTGATCGCTATGGCTTAGAGAGACTTA GACTGATGTGTGAAGCAAGTCTCTGTGAAGATGTTGCAATAAATACTGTGGCTACAACTTTAGCCTTGGCAGAGCAGCAC CATTGTTTCAAGCTTAAAGCAGTCTGTCTCAAGTTCATTGCTAGCTCCGAAAATCTCAGAGGTTTGTTTTTTTCCCTGAA CTTCTACTCCCTACAAGTTAGTGCTATATTTGGAGTAATTGTGACACTAGAATGTCTGAAAACCTGTAGTTAACTATAAT TCAAGTTAAATTTGTTACTGAGTGTTGACAATGAAGCTTGTCTGTCAGCCTGTCCCTGTTACATCATCCAGTCTGAACTT AAAAAAATGCTATGCTGTGAAGTGGTTTTGCTTTAATGCCACCATCTTTTCCTTACTCTTCTATATACCACTAATCTCAT GCAATTATCCCAAGTTGACCTTGAACCAGTATCCCCTTATTAATACTTTTATTGTACCTCTTAGGGAGGGGTTTCTGCCT CTCTACTTCCTTATGCCTCTTCTAAAACAGTATTGTTATCAGAAATGAAAACAAATATGAGTGCTTAGATTATGGAACAA TTAGTGTATAGTGTATACATTCGAGGATATCAGTCTAACTTCCGGGTGAAATATTTGATATTCACATGGCATAGGATAGT TACTGATGGCTATTACCAAAACTCTGTTGTAAATTTATCTGGACTAATTTGGCTTATTGATATTGGTGCCATTTTTCATT TTCATAGAGAAATATAATTATCAACTGAACTATTTCTATCCTTTGATTCTTCAGCTGTGATGCAAACTGATGGATTTGAG TACTTGAAGGAAAGCTGTCCCTCTGTGCTGACTGAGCTGTTGGAGTACGTGGCTAGATTTACTGAGCATTCGGACTTTAT GTGCAAACATAGGAATGAAGCAAATCTTGATGGCAGCGACATTAATGGGAGGCGGGTGAAGCAAAGACTTTAGTGTGA
CDS sequence (LotjaGi1g1v0730300.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGTAAGATTCTCCGAGAAACCGCGAGGCCATCTTCCTCCAGTTCCGCCCACCCATCATCCTCTTCCGATCCGGCGAC GACCTCGTCGACGTCGATAACCGAGACGGTGAGAGGCTCCCACCAGTTCAAGATCACCGGGTACTCGCTCTCCAAGGGAA TCGGGATCGGGAAGTACATAGCTTCCGATATTTTCACGGTGGGTGGGTACGATTGGGCGATTTATTTCTACCCTGATGGG AAGAGCCCTGAGGACAATGCCTCCTATGTTTCCCTCTTCATCGCGCTTGCCAGCGACGGCACCGACGTTAGGGCGCTTTT CGAGTTGACCCTTTTGGATCAGAGTGGCAACGAGAGGCATAAGGTGCATAGCCATTTCGAGAGGACTCTTGAAAGCGGGC CTTACACCTTGAAATACCGCGGTAGTATGTGGGGTTACAAGCGGTTTTTTAAGAGAACAGCTCTAGAGACATCGGACTAC CTTAAAGATGATTGCCTTAATGTGAATTGTAGTGTTGGTGTTGTGAGGTCTTTTACGGAAGGCCCTAAAATCTATTCCAT AGCAATACCGCCTTCTAACTTTGGTCAGCAATTTGGGCAATTGCTGGAAAGTAGTAAAGGAAGTGATGTTAGTTTTGAAG TGAATGAGGAAATGTTTGATGCTCATAAATTGGTGCTAGCAGCTCGATCACCTGTTTTCAGAGCCCAGCTTTTTGGTCCT ATGAAAGATCACAATACCCACTGTATTAAAGTTGAAGACATGGAGGCTCCAGCATTGCTTCATTTTATATACTGGGACTC CCTACCTGACATGCAGGAGCTTACTGGGTTGAATACCAAATGGGCAACGACCTTGATGGCTCAGCATCTTCTAGCAGCAG CTGATCGCTATGGCTTAGAGAGACTTAGACTGATGTGTGAAGCAAGTCTCTGTGAAGATGTTGCAATAAATACTGTGGCT ACAACTTTAGCCTTGGCAGAGCAGCACCATTGTTTCAAGCTTAAAGCAGTCTGTCTCAAGTTCATTGCTAGCTCCGAAAA TCTCAGAGCTGTGATGCAAACTGATGGATTTGAGTACTTGAAGGAAAGCTGTCCCTCTGTGCTGACTGAGCTGTTGGAGT ACGTGGCTAGATTTACTGAGCATTCGGACTTTATGTGCAAACATAGGAATGAAGCAAATCTTGATGGCAGCGACATTAAT GGGAGGCGGGTGAAGCAAAGACTTTAG
Protein sequence (LotjaGi1g1v0730300.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGKILRETARPSSSSSAHPSSSSDPATTSSTSITETVRGSHQFKITGYSLSKGIGIGKYIASDIFTVGGYDWAIYFYPDG KSPEDNASYVSLFIALASDGTDVRALFELTLLDQSGNERHKVHSHFERTLESGPYTLKYRGSMWGYKRFFKRTALETSDY LKDDCLNVNCSVGVVRSFTEGPKIYSIAIPPSNFGQQFGQLLESSKGSDVSFEVNEEMFDAHKLVLAARSPVFRAQLFGP MKDHNTHCIKVEDMEAPALLHFIYWDSLPDMQELTGLNTKWATTLMAQHLLAAADRYGLERLRLMCEASLCEDVAINTVA TTLALAEQHHCFKLKAVCLKFIASSENLRAVMQTDGFEYLKESCPSVLTELLEYVARFTEHSDFMCKHRNEANLDGSDIN GRRVKQRL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 35 | 35 | - | – | |
| MobiDBLite | 8 | 35 | 28 | - | – | |
| PANTHER | 19 | 388 | 370 | 3.1E-236 | – | |
| PANTHER | 19 | 388 | 370 | 3.1E-236 | – | |
| SUPERFAMILY | 35 | 174 | 140 | 2.94E-36 | ||
| Gene3D | 36 | 176 | 141 | 5.7E-33 | ||
| ProSiteProfiles | 38 | 172 | 135 | 23.536 | ||
| CDD | 39 | 172 | 134 | 2.87398E-28 | ||
| SMART | 43 | 155 | 113 | 1.3E-9 | ||
| Gene3D | 185 | 309 | 125 | 1.0E-38 | – | |
| SUPERFAMILY | 185 | 312 | 128 | 1.1E-25 | ||
| CDD | 195 | 311 | 117 | 8.00735E-63 | – | |
| Pfam | 199 | 312 | 114 | 7.9E-20 | ||
| ProSiteProfiles | 208 | 264 | 57 | 13.074 | ||
| SMART | 208 | 314 | 107 | 4.5E-17 | ||
| CDD | 311 | 374 | 64 | 1.80234E-32 | ||
| Gene3D | 314 | 391 | 78 | 2.1E-21 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi1g1v0730300.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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