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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0731900 |
| Transcript ID | LotjaGi1g1v0731900.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Sugar transporter family protein; TAIR: AT2G48020.1 Major facilitator superfamily protein; Swiss-Prot: sp|P93051|ERDL7_ARATH Sugar transporter ERD6-like 7; TrEMBL-Plants: tr|A0A151TUC1|A0A151TUC1_CAJCA Sugar transporter ERD6-like 7; Found in the gene: LotjaGi1g1v0731900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:130354293..130358529) extracted from Lotus japonicus Gifu genome v1.2.
CTTTTATCCGCGCTGACGTGTCCATGACCACAAGGGCTTAGCATTAACATTTGCCAACTTTGTGTAACATGTTCTATATT ATGCCTCATGGCAATCCTATCACACCATGATTGCTTGCATCTGAGTCCCTTGAACAAGGAACCAGTGATCATCATACACA CAAGTTAATATGGCCATCAAAGAGGATGTGGAATATGGTGTGGAGAAAGGAATCAGAGAGCCATTGGTGAAGGATCAGAA CAAGCTGCTGAACCATGCAAGAAAAGGGCATCCATGGATTGTTTATTTCACCACATTTGTTGCAGTCTGTGGTTCTTATG AATTTGGGGCTGGTGTAAGTGTTTACAATGCACTTCAACTGTTTGTAGCATTGCCCATCTCCAATAAAAGCGGATATATA GTTCAACTCCTATAAAAAATTAAACAGTTTTTGAAATGATTATTATTTGACTAAGAGTTTGATAGATATGTGTCTCTCTG AGTGTGGAATGATTATTGTTCTGTTTTCAGATTGGATACTCGTCTCCTACTCAAGATGCTATCAGGAAGGATCTCAATCT GTCTTTGGCAGAGGTAAGATAAGAGAGTAGTTATTGAAACTTGAATCCAAATATATATATATATATATATATATATATAT ATATATCCAACTGATTCACTCTTGTAGGGTTAATGAAATCATGGCAAATATATTGAGAATGATTCAAAAGGGGCAAAGGT ATATACTTGATTTGATGGGAATAGGGGAAGTATATAGAAATTTTACTTTGTGGAGTTGATGATGCCAGTGCTTGAAAACT AGTCCTGGACTTGATGTAATTTTATTTGCTTTTTGCTTGCAGTACTCCTTGTTTGGCTCCATCGTGACATTTGGAGCAAT GATCGGCGCAATCACAAGCGGGCTTATTGCTGATTTTATTGGACGAAAAGGCGTAAGTTCAGGAAAATTTTGATGGTTGT TTTAAGATTGACTTCTTAACTATATTTATTTGGGGCATTTTCAAGGTGATAAAAAAGTTGAAATCTGAAAAAATGCAGGC AATGAGAGTATCAAGTGCTTTCTGTGTTGCAGGATGGCTTGTTATTTACTTTTCTCAGGTTCTCACTACAGAACTTTTGT GATGTTTGTGACCAAACCTTTTTCCAAGGGTTATGAACTAACTTAACAGAAATTATCTTTCTTTTATGCAGGGCCCAGTG CTTTTGGATATTGGGAGGGTAGCAACAGGATATGGAATGGGAGTTTTTTCATATGTGGTAGGTTGGAGTTCTATTCCCAA GAACATAAATTTTTTTTGTTCAGTGAAATAATTCAAAAGATTTCACCTGAGACACTTCTATGCTCAAATTGTCAAAGTTT GACTGTACACTTTTATGAATTATATAAGGTTCCTGTCTTCATAGCCGAAATCGCACCAAAAGAACTCCGTGGGGCACTGA CTACCTTAAATCAGGTAGGTTTTGCATCACTTATCGTAACTTTGGGCACTGACTACCTCATACAGTGAACTGATTGAATG TGTAGTAAGTAGTATGCAATGAAGGTAGCAATGGCATCTAACTTTTGCTTTCTTTTATCCTTGTAGTTCATGCTCGTTTC TGCCATGTCTGTGTCATTCGTAATTGGAAATGTACTTTCATGGAGGGCTTTAGCATTAACCGGTGAGCTTTCTTCCCAAT TTAAATATAATTCACCAAAAAGAAATCTAGTCAGAACATAAAAATTTTGAAAATTAGAAATCAAAAGTACTATTTTGCAA TTGCAGGCCTGATTCCCACTGCTGTATTGCTTTTGGGTCTTTTTTTCATTCCAGAGTCCCCTAGATGGCTGGTAAGAAAA AAAGTCACATATAAATGTACTTATAACATATAAGAGTACAATATGCATTGATTTGAATATCATCAGTAGTACCAACTAAA AATCACTGCAGGCAAAGAGAGGATGCAGAGAAGATTTTGAGGCAGCACTGCAGATACTTCGCGGCAAAGATGCTGACATA TCTCAAGAGGCGGAAGAAATTCAGGTTCCTTTATCTTCCTATATTATCAATGTTGATAGAATTATGTGTGTGACTTTGTC TCCATGCACAACTCAAAGCATTCCAAAGATAATTTGATTAAGAGGGTGCATTGTGTCACTGCAGGATTATATAAAAACTT TAGAACGGCTCCCAAAACCCAAGCTTCTGGATTTGTTTCAGAGAAGAAATTTGCGGTCACTCACTGTAATTGGAAGCTGC CTTGTTTCCTTTTGGATATCACTTTACTTTCTTTAAATATGTGTTTTACAAACTAAGTGGAGAGGTGGAAAATGAAGTGC ATGTTGAAAATGATTTTTAATCAAGAGTGAAAATTCTATACAGTTTATTTTCCACCTTCTCTAGTATTTGCCGTATCAAG CAAATCTGAAGTGATTTTCATTTAAAATTTTAGTCTTCCTATTTTTCACCAACTCAAGCAAGAAGTATACTGCAAGGACC AACATATAACTAACTTTTATTTATCAATTACCAGATTGTAGTGGGACTTATGATCTGCCAGCAATTAGGAGGAATCAATG GAGTTTGCTTTTATGCTCGAAGTACTTTTGAGCTAGCAGGTACTATTGAGAATCATTGTAAATGTAACTCTGCATTCCAA GTCTCTGGATCACTGATAATTTTTCTTGCATACAACCATTTCCTCGCATATAACATATAATTCCCATTGCCAGTTTCCCA AACTTGAATAAACTTCATGATACAATCAGATTCTAATTTTGATTTTGCCATGGATTTTATGTCATAGGTTTTTCTACCAC TATTGGGACTATAATATATGCTTGCCTTCAGGTTATTTTTAACTTAAACCACTATTTCTTGGAAAATAAGATATTTGTTT TCCCCTAACCAACTCATCATTTTTTTTTTGCAGATTGTGATCACTGGTGTAGGAGCAGCCTTGATAGATAAAGCTGGCAG GAAACCGCTACTACTGGTAGATTCAAATTGGAAAACATTTTATCTTTGAAATTTTGACTACTTATTCAGACTTCCTTTCA TGTATAATATGCTCATTTTTCTTTCTTGGTTTTATTTAGTTTGCTGGATTCGGATTGGTTGCAGGATCTATACTTACTGC AGTTGCGTTCTATCTCAAGGTACATACCAACTGAGAATCCTATAGATTCCTGGTTCTAGTCCTGATTTTTTATATGAATT TGTTATCCTTGAGTGCAACAGGTTCAGGAAGTTAGTGTGGGAGCAGTTCCGGCACTTGCTGTAACTGGCATAATGGTATG ACCGTTAGAGCCGTTTTGATGCAGATCAAAAAACACTTACTGGAGTTTATCTGATAAGCTCCAATAAGTGTTCATTGGTC CTCATTCAAATGTGATCTTACTTTTTTTTATAGTGCTATTTGCTTGAATGTATCTCAGAAAAATGAAATCATCCTCCATA TGATGGTACTCTTACTTTTACTTATATTAGGTCTATGTAGGATCATTTTCAATAGGAATGGGAGCAATTCCATGGGTTAT GATGTCTGAGGTACTCCTCCCTTCTCTGCTTTCAAGTTCTAATGGTATCAACTATCAAGATATTAGAAATGCAAATTAAT TAAACATTTACCTTTTCAAAATAAGAATTGCAATAAAAGAACTAGCAAATGTTGATATTCAAGTCCTCACAGCTTCTACT TTTACTTATCTTTTGGTCGCAGATATTCCCTGTGAATATTAAAGGGCAGGCTGGAAGCTTAGCCACTTTACTGAACTGGT TTGGTGCATGGCTATGCTCCTACACTTTCAACTTTCTCATGAGCTGGAGCTCCTATGGTATGTACAAGTTATATTTTTCT TTATTTCATTAAAAAGAGTGACTGATCAGTACTGTCATATGACAACCAATTACCATTAGGGAATACAGTAAAGGATTGAA GTTCAAGAAACCTGTGGATCAACATCTAAATTTTACTTGTATTTACGAATTTCAGGTACCTTCATTCTTTATGCTGCAAT CAATGCAATAGCTATACTATTTATAGTTGTAGTGGTGCCAGAAACCAAGGGTAAGAGCCTGGAACAAATACAAGCAGCCA TTAATAAGTAGGAAGCAGAGTTTAGCAGTTTGCACTGTGTGATGGGAAAGAAAAAAAGAAGCATGTTGATGATTGAATTT TTGTATTATTATTTTTTTCTTAAGACATTAATCAATTGATTAGGATGTATATTTTAGTCATAATATCAATTATGTGA
CDS sequence (LotjaGi1g1v0731900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCCATCAAAGAGGATGTGGAATATGGTGTGGAGAAAGGAATCAGAGAGCCATTGGTGAAGGATCAGAACAAGCTGCT GAACCATGCAAGAAAAGGGCATCCATGGATTGTTTATTTCACCACATTTGTTGCAGTCTGTGGTTCTTATGAATTTGGGG CTGGTATTGGATACTCGTCTCCTACTCAAGATGCTATCAGGAAGGATCTCAATCTGTCTTTGGCAGAGTACTCCTTGTTT GGCTCCATCGTGACATTTGGAGCAATGATCGGCGCAATCACAAGCGGGCTTATTGCTGATTTTATTGGACGAAAAGGCGC AATGAGAGTATCAAGTGCTTTCTGTGTTGCAGGATGGCTTGTTATTTACTTTTCTCAGGGCCCAGTGCTTTTGGATATTG GGAGGGTAGCAACAGGATATGGAATGGGAGTTTTTTCATATGTGGTTCCTGTCTTCATAGCCGAAATCGCACCAAAAGAA CTCCGTGGGGCACTGACTACCTTAAATCAGTTCATGCTCGTTTCTGCCATGTCTGTGTCATTCGTAATTGGAAATGTACT TTCATGGAGGGCTTTAGCATTAACCGGCCTGATTCCCACTGCTGTATTGCTTTTGGGTCTTTTTTTCATTCCAGAGTCCC CTAGATGGCTGGCAAAGAGAGGATGCAGAGAAGATTTTGAGGCAGCACTGCAGATACTTCGCGGCAAAGATGCTGACATA TCTCAAGAGGCGGAAGAAATTCAGGATTATATAAAAACTTTAGAACGGCTCCCAAAACCCAAGCTTCTGGATTTGTTTCA GAGAAGAAATTTGCGGTCACTCACTATTGTAGTGGGACTTATGATCTGCCAGCAATTAGGAGGAATCAATGGAGTTTGCT TTTATGCTCGAAGTACTTTTGAGCTAGCAGGTTTTTCTACCACTATTGGGACTATAATATATGCTTGCCTTCAGATTGTG ATCACTGGTGTAGGAGCAGCCTTGATAGATAAAGCTGGCAGGAAACCGCTACTACTGTTTGCTGGATTCGGATTGGTTGC AGGATCTATACTTACTGCAGTTGCGTTCTATCTCAAGGTTCAGGAAGTTAGTGTGGGAGCAGTTCCGGCACTTGCTGTAA CTGGCATAATGGTCTATGTAGGATCATTTTCAATAGGAATGGGAGCAATTCCATGGGTTATGATGTCTGAGATATTCCCT GTGAATATTAAAGGGCAGGCTGGAAGCTTAGCCACTTTACTGAACTGGTTTGGTGCATGGCTATGCTCCTACACTTTCAA CTTTCTCATGAGCTGGAGCTCCTATGGTACCTTCATTCTTTATGCTGCAATCAATGCAATAGCTATACTATTTATAGTTG TAGTGGTGCCAGAAACCAAGGGTAAGAGCCTGGAACAAATACAAGCAGCCATTAATAAGTAG
Protein sequence (LotjaGi1g1v0731900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAIKEDVEYGVEKGIREPLVKDQNKLLNHARKGHPWIVYFTTFVAVCGSYEFGAGIGYSSPTQDAIRKDLNLSLAEYSLF GSIVTFGAMIGAITSGLIADFIGRKGAMRVSSAFCVAGWLVIYFSQGPVLLDIGRVATGYGMGVFSYVVPVFIAEIAPKE LRGALTTLNQFMLVSAMSVSFVIGNVLSWRALALTGLIPTAVLLLGLFFIPESPRWLAKRGCREDFEAALQILRGKDADI SQEAEEIQDYIKTLERLPKPKLLDLFQRRNLRSLTIVVGLMICQQLGGINGVCFYARSTFELAGFSTTIGTIIYACLQIV ITGVGAALIDKAGRKPLLLFAGFGLVAGSILTAVAFYLKVQEVSVGAVPALAVTGIMVYVGSFSIGMGAIPWVMMSEIFP VNIKGQAGSLATLLNWFGAWLCSYTFNFLMSWSSYGTFILYAAINAIAILFIVVVVPETKGKSLEQIQAAINK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 35 | 35 | - | – | |
| PANTHER | 28 | 472 | 445 | 6.6E-222 | – | |
| PANTHER | 28 | 472 | 445 | 6.6E-222 | – | |
| Gene3D | 32 | 473 | 442 | 9.5E-116 | – | |
| SUPERFAMILY | 33 | 468 | 436 | 1.31E-57 | ||
| TMHMM | 35 | 57 | 23 | - | – | |
| TIGRFAM | 36 | 467 | 432 | 2.9E-87 | ||
| Phobius | 36 | 58 | 23 | - | – | |
| CDD | 39 | 466 | 428 | 7.75017E-178 | – | |
| ProSiteProfiles | 41 | 460 | 420 | 43.62 | ||
| Phobius | 59 | 77 | 19 | - | – | |
| Pfam | 73 | 469 | 397 | 1.1E-87 | ||
| TMHMM | 77 | 99 | 23 | - | – | |
| Phobius | 78 | 99 | 22 | - | – | |
| ProSitePatterns | 95 | 112 | 18 | - | ||
| Phobius | 100 | 105 | 6 | - | – | |
| Phobius | 106 | 125 | 20 | - | – | |
| TMHMM | 112 | 131 | 20 | - | – | |
| Phobius | 126 | 136 | 11 | - | – | |
| PRINTS | 132 | 151 | 20 | 5.7E-16 | ||
| TMHMM | 136 | 158 | 23 | - | – | |
| Phobius | 137 | 157 | 21 | - | – | |
| Phobius | 158 | 163 | 6 | - | – | |
| Phobius | 164 | 183 | 20 | - | – | |
| TMHMM | 165 | 187 | 23 | - | – | |
| Phobius | 184 | 188 | 5 | - | – | |
| Phobius | 189 | 210 | 22 | - | – | |
| TMHMM | 191 | 210 | 20 | - | – | |
| Phobius | 211 | 273 | 63 | - | – | |
| TMHMM | 270 | 292 | 23 | - | – | |
| Phobius | 274 | 297 | 24 | - | – | |
| PRINTS | 284 | 294 | 11 | 5.7E-16 | ||
| Phobius | 298 | 308 | 11 | - | – | |
| TMHMM | 307 | 329 | 23 | - | – | |
| Phobius | 309 | 329 | 21 | - | – | |
| ProSitePatterns | 325 | 342 | 18 | - | ||
| Phobius | 330 | 335 | 6 | - | – | |
| TMHMM | 336 | 358 | 23 | - | – | |
| Phobius | 336 | 358 | 23 | - | – | |
| Phobius | 359 | 369 | 11 | - | – | |
| Phobius | 370 | 395 | 26 | - | – | |
| TMHMM | 373 | 395 | 23 | - | – | |
| PRINTS | 373 | 394 | 22 | 5.7E-16 | ||
| PRINTS | 396 | 408 | 13 | 5.7E-16 | ||
| Phobius | 396 | 406 | 11 | - | – | |
| TMHMM | 407 | 429 | 23 | - | – | |
| Phobius | 407 | 426 | 20 | - | – | |
| Phobius | 427 | 437 | 11 | - | – | |
| TMHMM | 434 | 456 | 23 | - | – | |
| Phobius | 438 | 456 | 19 | - | – | |
| Phobius | 457 | 473 | 17 | - | – | |
| Coils | 464 | 473 | 10 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi1g1v0731900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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