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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0732700 |
| Transcript ID | LotjaGi1g1v0732700.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Gibberellin receptor GID1A; TAIR: AT3G63010.1 alpha/beta-Hydrolases superfamily protein; Swiss-Prot: sp|Q9LYC1|GID1B_ARATH Gibberellin receptor GID1B; TrEMBL-Plants: tr|A0A1J7H1K7|A0A1J7H1K7_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0732700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:130438478..130439560) extracted from Lotus japonicus Gifu genome v1.2.
GTTAGGAGTAGTGCAGAGTGATGTGGAGAATGTTAACATCATCAATGTTTGATGTATTGTTTGTTCCTTTCTATTTTTTT GTAGAATGTTGTTCCACTGAATACATGGGTGCTTATCTCCAATTTCAAGCTAGCCTACAATCTTCTCAGACGTGCTGATG GAACATTCAATCGAGAGTTAGCAGAGTTTCTGGACCGAAAGGTGCCGGCCAATGCATTTGCTGTTGATGGAGTCTTCTCT TTTGATCACGTGGACCGGAACAATGGCCTCTTCAACCGGGTCTACATGCCAGCTTCTGAGAATGAATCTCAATGGGGTGT GAAGAACATGGAGAGGCCTTTAAGCACAACAAAGATTGTGCCTGTCATAATCTTCTTCCATGGGGGAAGCTTCTGTCATT CCTCTGCCAACAGCGCTATCTACGATGCCTTCTGCCGCCGCCTTGTAAGCGTCTGCGGGGCAGCTGTGGTGTCGGTTGAT TACAGGCGGTCACCGGAGCACCGGTATCCGGCTGCCTACGAAGACGGCTGGGCGGCACTCAAGTGGGTGAAGTCAAGAAC TTGGCTGCAAAGTGGGAAGGATTCCAAGGTTTATGTGTACATGGCTGGGGACAGTTCTGGAGGGAACATTGCTCATCATG TGGCGGTGAGGGCGGCGGAGGAAGGAATTGAGGTTTTAGGGAACATTCTTCTCCACCCTTTGTTTGGCGGCGAGAAGAGG ACGGAATCGGAGATGAGGCTTGATGGGAAGTACTTTGTGAGATTGCAGGACCGTGATTGGTATTGGAGAGCTTTTCTTCC TGAGGGAGAGGATAGGGACCATCCTGGTTGTAACCCTTTTGGCCCCAAAGGGAAAAGCATTAAAGGGATCAAATTCCCTA AAAGCCTTGTTTGTGTGGCTGGTTTGGATGTTCTCCAAGATTGGCAATTGGCTTATGCGGAAGGCCTTCAGAAAAATGGC CACCAGGTCAAACCTCTTTTCCTCAAGGAGGCCACCATTGGTTTCTACTTCTTGCCAAACAATGATCATTTCTATTGCCT CATGGACGAGATCAAGAGCTTCGTGAGTTCTTCTGACTGTTAA
CDS sequence (LotjaGi1g1v0732700.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCCAGCTTCTGAGAATGAATCTCAATGGGGTGTGAAGAACATGGAGAGGCCTTTAAGCACAACAAAGATTGTGCCTGT CATAATCTTCTTCCATGGGGGAAGCTTCTGTCATTCCTCTGCCAACAGCGCTATCTACGATGCCTTCTGCCGCCGCCTTG TAAGCGTCTGCGGGGCAGCTGTGGTGTCGGTTGATTACAGGCGGTCACCGGAGCACCGGTATCCGGCTGCCTACGAAGAC GGCTGGGCGGCACTCAAGTGGGTGAAGTCAAGAACTTGGCTGCAAAGTGGGAAGGATTCCAAGGTTTATGTGTACATGGC TGGGGACAGTTCTGGAGGGAACATTGCTCATCATGTGGCGGTGAGGGCGGCGGAGGAAGGAATTGAGGTTTTAGGGAACA TTCTTCTCCACCCTTTGTTTGGCGGCGAGAAGAGGACGGAATCGGAGATGAGGCTTGATGGGAAGTACTTTGTGAGATTG CAGGACCGTGATTGGTATTGGAGAGCTTTTCTTCCTGAGGGAGAGGATAGGGACCATCCTGGTTGTAACCCTTTTGGCCC CAAAGGGAAAAGCATTAAAGGGATCAAATTCCCTAAAAGCCTTGTTTGTGTGGCTGGTTTGGATGTTCTCCAAGATTGGC AATTGGCTTATGCGGAAGGCCTTCAGAAAAATGGCCACCAGGTCAAACCTCTTTTCCTCAAGGAGGCCACCATTGGTTTC TACTTCTTGCCAAACAATGATCATTTCTATTGCCTCATGGACGAGATCAAGAGCTTCGTGAGTTCTTCTGACTGTTAA
Protein sequence (LotjaGi1g1v0732700.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MPASENESQWGVKNMERPLSTTKIVPVIIFFHGGSFCHSSANSAIYDAFCRRLVSVCGAAVVSVDYRRSPEHRYPAAYED GWAALKWVKSRTWLQSGKDSKVYVYMAGDSSGGNIAHHVAVRAAEEGIEVLGNILLHPLFGGEKRTESEMRLDGKYFVRL QDRDWYWRAFLPEGEDRDHPGCNPFGPKGKSIKGIKFPKSLVCVAGLDVLQDWQLAYAEGLQKNGHQVKPLFLKEATIGF YFLPNNDHFYCLMDEIKSFVSSSDC
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 2 | 262 | 261 | 1.4E-78 | ||
| PANTHER | 5 | 262 | 258 | 8.0E-143 | – | |
| PANTHER | 5 | 262 | 258 | 8.0E-143 | – | |
| SUPERFAMILY | 22 | 260 | 239 | 2.01E-49 | ||
| ProSitePatterns | 28 | 44 | 17 | - | ||
| Pfam | 28 | 241 | 214 | 7.7E-60 | ||
| ProSitePatterns | 104 | 116 | 13 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Hydrolase activity | Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3. |
Expression pattern of LotjaGi1g1v0732700.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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