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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR033140
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 16 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.963s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj1g3v1686830.1
n.a. Gibberellic acid receptor-b [Medicago truncatula] gi|357442625|ref|XP_003591590.1| chr1 20072692 20075563 +
2 domain predictions
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Lj1g3v3328850.1
n.a. PREDICTED: probable carboxylesterase 17-like [Glycine max] gi|356567288|ref|XP_003551853.1| chr1 37363701 37364842 -
2 domain predictions
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Lj4g3v0575590.1
n.a. PREDICTED: probable carboxylesterase 12-like [Cicer arietinum] gi|502143057|ref|XP_004505200.1| chr4 9171141 9172786 +
2 domain predictions
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Lj4g3v0575620.1
n.a. Hormone-sensitive lipase [Medicago truncatula] gi|357475449|ref|XP_003608010.1| chr4 9183741 9184884 +
2 domain predictions
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Lj4g3v0575640.1
n.a. PREDICTED: probable carboxylesterase 12-like [Cicer arietinum] gi|502143057|ref|XP_004505200.1| chr4 9186784 9187898 +
2 domain predictions
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Lj4g3v0575670.1
n.a. PREDICTED: probable carboxylesterase 12-like [Cicer arietinum] gi|502143060|ref|XP_004505201.1| chr4 9193558 9195632 +
2 domain predictions
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Lj5g3v1692530.1
n.a. Gibberellic acid receptor-b [Medicago truncatula] gi|357442625|ref|XP_003591590.1| chr5 23949017 23951260 +
2 domain predictions
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Lj5g3v2217200.1
n.a. PREDICTED: probable carboxylesterase 17-like [Glycine max] gi|356574179|ref|XP_003555229.1| chr5 31934753 31938189 +
2 domain predictions
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LotjaGi1g1v0551500.1
n.a. Alpha/beta-Hydrolases superfamily protein; TAIR: AT5G16080.1 carboxyesterase 17; Swiss-Prot: sp|Q9LFR7|CXE17_ARATH Probable carboxylesterase 17; TrEMBL-Plants: tr|I1N5D4|I1N5D4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0551500 LjG1.1_chr1 108282089 108283614 -
2 domain predictions
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LotjaGi1g1v0732700.1
n.a. Gibberellin receptor GID1A; TAIR: AT3G63010.1 alpha/beta-Hydrolases superfamily protein; Swiss-Prot: sp|Q9LYC1|GID1B_ARATH Gibberellin receptor GID1B; TrEMBL-Plants: tr|G7I2T6|G7I2T6_MEDTR Gibberellin receptor GID1c-like protein; Found in the gene: LotjaGi1g1v0732700 LjG1.1_chr1 130436750 130440609 -
2 domain predictions
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LotjaGi1g1v0732700.2
n.a. Gibberellin receptor GID1A; TAIR: AT3G63010.1 alpha/beta-Hydrolases superfamily protein; Swiss-Prot: sp|Q9LYC1|GID1B_ARATH Gibberellin receptor GID1B; TrEMBL-Plants: tr|A0A1J7H1K7|A0A1J7H1K7_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0732700 LjG1.1_chr1 130438478 130439560 -
2 domain predictions
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LotjaGi4g1v0072300.1
n.a. Carboxylesterase 1; TAIR: AT3G48690.1 alpha/beta-Hydrolases superfamily protein; Swiss-Prot: sp|Q9SMN0|CXE12_ARATH Probable carboxylesterase 12; TrEMBL-Plants: tr|A0A151UAJ0|A0A151UAJ0_CAJCA Putative gibberellin receptor GID1L3; Found in the gene: LotjaGi4g1v0072300 LjG1.1_chr4 9134869 9136340 +
2 domain predictions
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LotjaGi4g1v0072400.1
n.a. Carboxylesterase 1; TAIR: AT3G48690.1 alpha/beta-Hydrolases superfamily protein; Swiss-Prot: sp|Q9SMN0|CXE12_ARATH Probable carboxylesterase 12; TrEMBL-Plants: tr|A0A151UAJ0|A0A151UAJ0_CAJCA Putative gibberellin receptor GID1L3; Found in the gene: LotjaGi4g1v0072400 LjG1.1_chr4 9144592 9146134 +
2 domain predictions
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LotjaGi4g1v0072600.1
n.a. Alpha/beta-Hydrolases superfamily protein, putative; TAIR: AT2G03550.1 alpha/beta-Hydrolases superfamily protein; Swiss-Prot: sp|Q9ZQ91|CXE7_ARATH Probable carboxylesterase 7; TrEMBL-Plants: tr|I1JEV6|I1JEV6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0072600 LjG1.1_chr4 9166711 9169704 +
2 domain predictions
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LotjaGi5g1v0260700.1
n.a. Gibberellin receptor GID1A; TAIR: AT3G63010.1 alpha/beta-Hydrolases superfamily protein; Swiss-Prot: sp|Q9LYC1|GID1B_ARATH Gibberellin receptor GID1B; TrEMBL-Plants: tr|A0A1J7IIT0|A0A1J7IIT0_LUPAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0260700 LjG1.1_chr5 56913545 56917793 -
2 domain predictions
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LotjaGi5g1v0341700.1
n.a. Alpha/beta-Hydrolases superfamily protein; TAIR: AT5G16080.1 carboxyesterase 17; Swiss-Prot: sp|Q9LFR7|CXE17_ARATH Probable carboxylesterase 17; TrEMBL-Plants: tr|I1NFG8|I1NFG8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0341700 LjG1.1_chr5 65880607 65882476 +
2 domain predictions
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