Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0740800 |
| Transcript ID | LotjaGi1g1v0740800.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Cation/H(+) antiporter; TAIR: AT2G13620.1 cation/hydrogen exchanger 15; Swiss-Prot: sp|Q9SIT5|CHX15_ARATH Cation/H(+) antiporter 15; TrEMBL-Plants: tr|A0A0B2NY16|A0A0B2NY16_GLYSO Cation/H(+) antiporter 15; Found in the gene: LotjaGi1g1v0740800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:131475218..131478650) extracted from Lotus japonicus Gifu genome v1.2.
AAATAAGATAGTAATTCATCGTTGTTATTGTTCTACTAGAATAGAGGAACATAACCACTAATAGAAAGTTACAACCAATA GTTAAGGTACATGCCATCTCAAACAAACACATAAATTTGCTCCGGAACGTGGTTTTTTTTACATCGTACAACAAACAAGA CAAAAATAAACTTAGATACTTGTGAGTCATAAATCATAAGTTTCAAAACCTGATACAACCATAGCAGAACAAAAAGTGGA AGTCACACGTCGAATAGTATAGGGAGAATATCAGAAGGAAGACAGAAACTATGGGGGATTCTGCAAGAAATGCATGCTAC AATGTATCTGTGATTCATCCCAATCGAATCTGGCAAACAGATAATGTTGTAAAATCAGAGCTCAGTGTTCTCGCCTTTCA AATTTGCTTCACTGCATTCTTCTCTAGTATTTTCTTCTACATCTATAAACGCCTCCTACAACCACGTCTACTTTCCCAAA TCGCTGTAAGTATATACAAGTGTTTCAATTCCTCTGTAAAATGATGAAATGTGATTGAAAATCAGTGTAACATTTTTAAT CAAAAAACAAACAAACCTAGTGCTAGAAAGCTCCCCGCTATGCGTCGTGGTATAGGGAAAGGTTGTATCCACTTCGTGGA TTTAATGTAGGCCATCCTAAATTTTACAAGGGGGAAAAGCCTTGGCGCAGCGATAAGGTTGGGTTTGCAATCACATATTC GAGCCAGGGAACAATTCTAATAAACTAATAACAAATTAATAGCCAATATGTTATTTGTCATTCTAACTAGAGGATATTCT AAATTCAAATTTGCAGGTTGGCTTCATCCTAACGAGCCCATTTATAGGGAATTACGCATCTGTTTTTCAGTTCATTTATC CTGTAAGAGGGGTCATAAACATTGAAGTGCTAGGAAACCTTGGATTGATATTCTACTCATTCCTCAGTGGGTTGGAAATG AACTTGAATACCATTCTAAATGCCAATAAGAAAGCCAAAAGCATCGCCGTTGCTGGGATCGCGTTTCCCATGGTGATGGC ACCAACCTTATATGTTATGCATCGAAAAGTTTACATGGGACCTGTTTTCTACAAACTTGAAGAAGACACAACTCATGCTT ATTTACTTTGGACTCTAGTTATCACTGTAACAGGTTTTCCAGTCGTAGCTCAGTCCCTTTCTGATCTCAAGCTCCTACAT ACGGGTCTCGGCAAAACTGCTTTAACAGCAGCCATGATTAGTGATTCCTATGCATGGATTCTTTTCACATTAGTGGTTCC ATTTTGTATTAATGCTAAAGGAGCAATGTACGCAGTGGTATGTACCATAGTATTCATTATCTTTAGCGTCTTTGTGCTAC ATCCTGTCGTCGAAAAGTATATTAACCAAAAGACCGAAAATGATGACTGGAACGACAGGGAGCTAGTCTTTGTGGGGATG GGGGTCTTAGCTTTTTCATACTTAACAGATCTTCTTGGAACCCATGGGATTGTTGGTGCTTTTGTGTATGGACTCATTCT ACCTCATGGAAAATTTTCTGACATGGTTATGTCAGCTACAGATGATTTTGCTACTGGGTTTCTGGCACCAACCTACTTCG CTGGAGTTGGACTAAGACTCACATTACCAGCTATTTTTAACCAAGATAATTGGCACTTGACATTGCTAGTTGTACTCTTG CTGTGTGTTCCAAAGATTTTAAGCACTTTGTTCACTGGTTTCTTCTTCGGCATGCGCAACCAAGAAGGTCTAGCTCTGGG CTTGATTATGAATACCAAGGGTGCCATGGCATTGATCATGCTAAACATTGCTTGGGATAGAGGGGTAATTATTTATTTTA GCCATACTATTTAATTTAGTACATGTTTGAAAAATGTCGTAAAGGCAAAATCATGGTAAACAAAAGTAAAAGGAAATGGA TTTTGGTTCACTGTGGTTTTCCCGAATGCGTTGCCAAACATGCACTTACTCAAATTCTTTAGTTTTGATTACTCAAACAA TATCTATTGAAATTAAAAGTTCTTGAAATGTGATATTGCAGATATTATCTCCAGCAACCTACACTGTTATTACCTCTGCT GTTCTCCTAATGACTGCAGTGGTGTCTCCAATCCTTAACATCATGTACAAGCCTAGAAAGATATTTGGGCAGAATAAGCT AAAGACAATACTAAAGCTAAGACCTGATGCAGAGCTTCGAATTCTGGCGTGTGTCCACAATACTCGCCAAGCCACCGGCA TGATCAAGTTAATTGAATCCTTTAATGCGACAAGACTTTCTCCGTTACATGTTTTTGCACTCTACCTTATCGAGTTCACC AAACGCGGTGCTGCGCTTGTTGCTGCCCACATGGAGAAGCCTAACCATCATAACGGAGTGCAAAACCTGACCACAACACA GGCAGAGTTAGAGAACATTACTAGCATGTTCGTAGAATACGGAGAGAAACATGATGCTGCAAGAGTCCATACATTAAGTG TCATGTCAAACTACAACACCATTCATCAAGACATACACTTCACAGCAAATGAGAAACACACAAGCCTAATTCTCCTTCCA TTCCATAAACATTTATCTTCAGAAAAGGTGTTAGAGATAACTAGTCCTGTATATAGAGATATAAACCAAATGGTAATGCA TGATGCACCTTGTTCTGTGGGAATCTTTGTTGATCGTTTTCCTGGGAACTTACCGGAAAATAATTTCCACATTCTCATGC TTTTTATTGGTGGTCCTCATGACCGTGAAGCACTGGCTGTTGCGCGGAGGATGGCGGGGAAGGCAGGAGTCACGCTTACG GTGGTTCGATTCATATTTCTTGATGAATTAGCAGAGGTGGATACAAAAAGTTACCCTGAAGAGCAAGAGTTTTTATCTTT TATGATGGACATTGAGCAACAGAGAGAGTTGGATGATGAGTACGTGAGTTCATTCAGACTCAAAACAGTGAATATGAGTG ATGATTCTATATCCTACTCAGAGATTGGTGTACATTCGATTACTGATATCAACACAGTCCTGAATGAGATAGAAAACAAT GGCTGCGATTTATACATAGTTGGACAAGGAAATTTTAAGAACTCCCGTGTGTTCTCGAATTTATTGGTGTGGTCTGATTG CCCAGAACTTGGAGTTATGGGGGATATTCTTGCGTCAAAGGATTTTAGTCCACGTTCATCTGTGTTGGTTGTGCAGCAGT ATGGGTTTGGAGGATTGGTTTCTGGAAAAGATCCTAACCTTGTGAGGGTTCAAGTTGCTTGAGGTGAAGATGGGTCAATA ACGGTTGTTAAGGATTTAACATGTGTATACGATGAAAAAGACTCGCTTTGTTTGCTTATTAAGTTTCCTGAATTATTTTG CATTTCCGTGAATATATGACATCATTTAATTTAATTATTTTTTATTATTTTTATGCTTCAAAATTGAATTTAT
CDS sequence (LotjaGi1g1v0740800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGGGATTCTGCAAGAAATGCATGCTACAATGTATCTGTGATTCATCCCAATCGAATCTGGCAAACAGATAATGTTGT AAAATCAGAGCTCAGTGTTCTCGCCTTTCAAATTTGCTTCACTGCATTCTTCTCTAGTATTTTCTTCTACATCTATAAAC GCCTCCTACAACCACGTCTACTTTCCCAAATCGCTGTTGGCTTCATCCTAACGAGCCCATTTATAGGGAATTACGCATCT GTTTTTCAGTTCATTTATCCTGTAAGAGGGGTCATAAACATTGAAGTGCTAGGAAACCTTGGATTGATATTCTACTCATT CCTCAGTGGGTTGGAAATGAACTTGAATACCATTCTAAATGCCAATAAGAAAGCCAAAAGCATCGCCGTTGCTGGGATCG CGTTTCCCATGGTGATGGCACCAACCTTATATGTTATGCATCGAAAAGTTTACATGGGACCTGTTTTCTACAAACTTGAA GAAGACACAACTCATGCTTATTTACTTTGGACTCTAGTTATCACTGTAACAGGTTTTCCAGTCGTAGCTCAGTCCCTTTC TGATCTCAAGCTCCTACATACGGGTCTCGGCAAAACTGCTTTAACAGCAGCCATGATTAGTGATTCCTATGCATGGATTC TTTTCACATTAGTGGTTCCATTTTGTATTAATGCTAAAGGAGCAATGTACGCAGTGGTATGTACCATAGTATTCATTATC TTTAGCGTCTTTGTGCTACATCCTGTCGTCGAAAAGTATATTAACCAAAAGACCGAAAATGATGACTGGAACGACAGGGA GCTAGTCTTTGTGGGGATGGGGGTCTTAGCTTTTTCATACTTAACAGATCTTCTTGGAACCCATGGGATTGTTGGTGCTT TTGTGTATGGACTCATTCTACCTCATGGAAAATTTTCTGACATGGTTATGTCAGCTACAGATGATTTTGCTACTGGGTTT CTGGCACCAACCTACTTCGCTGGAGTTGGACTAAGACTCACATTACCAGCTATTTTTAACCAAGATAATTGGCACTTGAC ATTGCTAGTTGTACTCTTGCTGTGTGTTCCAAAGATTTTAAGCACTTTGTTCACTGGTTTCTTCTTCGGCATGCGCAACC AAGAAGGTCTAGCTCTGGGCTTGATTATGAATACCAAGGGTGCCATGGCATTGATCATGCTAAACATTGCTTGGGATAGA GGGATATTATCTCCAGCAACCTACACTGTTATTACCTCTGCTGTTCTCCTAATGACTGCAGTGGTGTCTCCAATCCTTAA CATCATGTACAAGCCTAGAAAGATATTTGGGCAGAATAAGCTAAAGACAATACTAAAGCTAAGACCTGATGCAGAGCTTC GAATTCTGGCGTGTGTCCACAATACTCGCCAAGCCACCGGCATGATCAAGTTAATTGAATCCTTTAATGCGACAAGACTT TCTCCGTTACATGTTTTTGCACTCTACCTTATCGAGTTCACCAAACGCGGTGCTGCGCTTGTTGCTGCCCACATGGAGAA GCCTAACCATCATAACGGAGTGCAAAACCTGACCACAACACAGGCAGAGTTAGAGAACATTACTAGCATGTTCGTAGAAT ACGGAGAGAAACATGATGCTGCAAGAGTCCATACATTAAGTGTCATGTCAAACTACAACACCATTCATCAAGACATACAC TTCACAGCAAATGAGAAACACACAAGCCTAATTCTCCTTCCATTCCATAAACATTTATCTTCAGAAAAGGTGTTAGAGAT AACTAGTCCTGTATATAGAGATATAAACCAAATGGTAATGCATGATGCACCTTGTTCTGTGGGAATCTTTGTTGATCGTT TTCCTGGGAACTTACCGGAAAATAATTTCCACATTCTCATGCTTTTTATTGGTGGTCCTCATGACCGTGAAGCACTGGCT GTTGCGCGGAGGATGGCGGGGAAGGCAGGAGTCACGCTTACGGTGGTTCGATTCATATTTCTTGATGAATTAGCAGAGGT GGATACAAAAAGTTACCCTGAAGAGCAAGAGTTTTTATCTTTTATGATGGACATTGAGCAACAGAGAGAGTTGGATGATG AGTACGTGAGTTCATTCAGACTCAAAACAGTGAATATGAGTGATGATTCTATATCCTACTCAGAGATTGGTGTACATTCG ATTACTGATATCAACACAGTCCTGAATGAGATAGAAAACAATGGCTGCGATTTATACATAGTTGGACAAGGAAATTTTAA GAACTCCCGTGTGTTCTCGAATTTATTGGTGTGGTCTGATTGCCCAGAACTTGGAGTTATGGGGGATATTCTTGCGTCAA AGGATTTTAGTCCACGTTCATCTGTGTTGGTTGTGCAGCAGTATGGGTTTGGAGGATTGGTTTCTGGAAAAGATCCTAAC CTTGTGAGGGTTCAAGTTGCTTGA
Protein sequence (LotjaGi1g1v0740800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGDSARNACYNVSVIHPNRIWQTDNVVKSELSVLAFQICFTAFFSSIFFYIYKRLLQPRLLSQIAVGFILTSPFIGNYAS VFQFIYPVRGVINIEVLGNLGLIFYSFLSGLEMNLNTILNANKKAKSIAVAGIAFPMVMAPTLYVMHRKVYMGPVFYKLE EDTTHAYLLWTLVITVTGFPVVAQSLSDLKLLHTGLGKTALTAAMISDSYAWILFTLVVPFCINAKGAMYAVVCTIVFII FSVFVLHPVVEKYINQKTENDDWNDRELVFVGMGVLAFSYLTDLLGTHGIVGAFVYGLILPHGKFSDMVMSATDDFATGF LAPTYFAGVGLRLTLPAIFNQDNWHLTLLVVLLLCVPKILSTLFTGFFFGMRNQEGLALGLIMNTKGAMALIMLNIAWDR GILSPATYTVITSAVLLMTAVVSPILNIMYKPRKIFGQNKLKTILKLRPDAELRILACVHNTRQATGMIKLIESFNATRL SPLHVFALYLIEFTKRGAALVAAHMEKPNHHNGVQNLTTTQAELENITSMFVEYGEKHDAARVHTLSVMSNYNTIHQDIH FTANEKHTSLILLPFHKHLSSEKVLEITSPVYRDINQMVMHDAPCSVGIFVDRFPGNLPENNFHILMLFIGGPHDREALA VARRMAGKAGVTLTVVRFIFLDELAEVDTKSYPEEQEFLSFMMDIEQQRELDDEYVSSFRLKTVNMSDDSISYSEIGVHS ITDINTVLNEIENNGCDLYIVGQGNFKNSRVFSNLLVWSDCPELGVMGDILASKDFSPRSSVLVVQQYGFGGLVSGKDPN LVRVQVA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 30 | 30 | - | – | |
| PANTHER | 7 | 795 | 789 | 0.0 | – | |
| PANTHER | 7 | 795 | 789 | 0.0 | – | |
| TMHMM | 29 | 51 | 23 | - | – | |
| Phobius | 31 | 52 | 22 | - | – | |
| Gene3D | 33 | 435 | 403 | 2.0E-71 | ||
| Pfam | 40 | 427 | 388 | 1.3E-45 | ||
| Phobius | 53 | 63 | 11 | - | – | |
| Phobius | 64 | 85 | 22 | - | – | |
| TMHMM | 64 | 86 | 23 | - | – | |
| Phobius | 86 | 90 | 5 | - | – | |
| Phobius | 91 | 108 | 18 | - | – | |
| TMHMM | 91 | 113 | 23 | - | – | |
| Phobius | 109 | 127 | 19 | - | – | |
| TMHMM | 128 | 145 | 18 | - | – | |
| Phobius | 128 | 147 | 20 | - | – | |
| Phobius | 148 | 166 | 19 | - | – | |
| TMHMM | 166 | 184 | 19 | - | – | |
| Phobius | 167 | 187 | 21 | - | – | |
| Phobius | 188 | 198 | 11 | - | – | |
| Phobius | 199 | 221 | 23 | - | – | |
| TMHMM | 199 | 221 | 23 | - | – | |
| Phobius | 222 | 226 | 5 | - | – | |
| Phobius | 227 | 247 | 21 | - | – | |
| TMHMM | 228 | 250 | 23 | - | – | |
| Phobius | 248 | 267 | 20 | - | – | |
| Phobius | 268 | 296 | 29 | - | – | |
| TMHMM | 284 | 303 | 20 | - | – | |
| Phobius | 297 | 315 | 19 | - | – | |
| Phobius | 316 | 335 | 20 | - | – | |
| TMHMM | 316 | 338 | 23 | - | – | |
| Phobius | 336 | 346 | 11 | - | – | |
| Phobius | 347 | 371 | 25 | - | – | |
| TMHMM | 348 | 370 | 23 | - | – | |
| Phobius | 372 | 376 | 5 | - | – | |
| Phobius | 377 | 398 | 22 | - | – | |
| TMHMM | 377 | 398 | 22 | - | – | |
| Phobius | 399 | 409 | 11 | - | – | |
| TMHMM | 408 | 430 | 23 | - | – | |
| Phobius | 410 | 430 | 21 | - | – | |
| Phobius | 431 | 807 | 377 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Cation transport | The directed movement of cations, atoms or small molecules with a net positive charge, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. | ||
| Molecular function | Solute:proton antiporter activity | Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: solute(out) + H+(in) = solute(in) + H+(out). | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi1g1v0740800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…