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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0743200 |
| Transcript ID | LotjaGi1g1v0743200.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Dihydrosphingosine 1-phosphate phosphatase; TAIR: AT3G58490.1 Phosphatidic acid phosphatase (PAP2) family protein; Swiss-Prot: sp|Q9M2G7|LPPD_ARATH Lipid phosphate phosphatase delta; TrEMBL-Plants: tr|I1JQE7|I1JQE7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0743200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:131673416..131678368) extracted from Lotus japonicus Gifu genome v1.2.
GAAAAATTGACATGGCAAAGTCTTGTTTTCAAGTGGAGTTCTAAAGCCACTTTCATATAATCCGTGTTCCTCACAATTTC GTCCTCCATGAAATTGAAAGAACGCCGTTGACCCGCTACGCGTTGAACCTTCTTACTATGTCACGTTACTAGTCATAGTG CCACCAAATTCCAGCTAATTCCAAAGACCACACACTTGAACCGAATATAAATTCCATGGCTCACAAAAATCTTCACTATT TTCTTTTTTAAAATGAATAATCACATTTTTAGAGATTAATTTAAAAATTAAAATAATGTTGAATCTTTGCAAATACCGTT GATTCCTCAATTTGATTCAGCCAGGTTTACTATTTCTGTACCTGCGACTCTCTCTCCTCTGTTCTTCTTCTTTCTTCGGT TCCTCTCTTCTTCTTCCTTCCTCTGTTCCCAAAGAGGAAACAAACCAGAGAGAACAACAATGGAGGTTGAGGGTGCAGGT GCGGGTGCAGCACTGTGGCAAGGTGCGGTTCTGGGTGGAATTCTCTTCTGGGTTGTGTTTTCTTCATACATCAATCTCAC TCGCAAGCTTAGATCCTTCCTTCAACCCTCTGTGACTCACCTTGTTGATACCGGAACCCCTATTATCCTTCAGATCCAGG TAACTCCCAAAATTAGAATTACAAAAAAATAAGAGAACCCCAGATTTTGATTCTCTCCAAGTTCTAAGCTTTTCAATGTT TTTTTGCTGTAAATGCTGATTTTGTGTTTTGATTTTTTTGTTTAAGGGTTACCGTGCTGGTTTGCTGGATGCTCTTTTCT CTGGGTTGTCTTGTGTTGTTTCTGTTCCCTTTTACACTGCTTTTCTCCCTCTGCTATTTTGGGTACGCACGTGTTGTTGA TGATGATGATGTCATGTTCCATGAACTGGTGAGAGTTCTTGTTTTTGGGAAAATTGAGATTGATTGGGTTTTTGGCTTCT GTGTAGAGTGGTCATGGCAAATTGGCAAGGCAGATGACGTTGTTGATGGCGTTTTGTGATTATATTGGAAACTGCATAAA AGTATGCACTTACTTTTGTTGAATTCAATACTAGAATTTAGAATTCTTAGTCTATGTTTGAGCTCACTTTTTACCTGTTA TATTAAATGCTTGCTGTGTTTGTCACTCAACAGGATGTGGTTTCAGCTCCAAGACCTGCTTCTCCACCTGTCTACAGAAT AACTGCTACCAAAGATGAAGAAGAGAACGCCTTAGAATATGGACTTCCTTCTTCTCACACGCTTAATACAGTTTGCTTAT CTGGGTACTCATTCTAATTCTTTTATAATCTTTTAATCCTAAGTCATCTTTCTTGTTGTGGTGTGAGGCTAAGTTAGCCG GCGGGGTGACAGAAAGGGATTATGAGGCATTTCTAGCATGTATGGATTAACTTTTCTGTCCTCGTGATCAATTATGGAGT CCAGAAGCTACTCACATAAGCTTCTTCCCATAATTGATTATAGATTAGAATCAATTATAGAAGGATTTCCAAACATGCAC ATCATTAGAGTGGCAATGTTGTGTGTTCTTGAGGCTGTTTGTGTGTAGCAAGTTGGTGGTTTTAGATATGCACAATTGCA CATTGTATAGAGAATTGAGCAGGCTGGATTCATGCCTTATTATTCAAGTCATATAATTAAACTTTTTTTTTTCTATCTAT TTTCTGGATCAACTAAGGAGAAAAGAGAACAGCTAAATATGTTAATGCATTTGCAATCAAACACTTAATGTACTGTCTAT CATCAGTTCAATTTGATTAGAAGCATGAAGGTTTTCAAAGCTAGATCATCTGTTGAGAAAGATGAAACCTTTGCTTCCAA TTCTGTTTTTTATCATTAATGGATGCTTTTCCTCGGAATGGTTTTTTTATCAGCTACCTTTTGCACTATGTCCTGACTCA TCCTCAAATTCAAGGTGCCTATATTAATTATCTTGGAGTTTCTCTCGGTTGCTTGTTTGTGGCTCTCATTGGTTTGGGTA GGTATTCTATTACTGTTACATTATTATCAGTTTCCCTATTGTTGGCCTATTGCACTGAAAAACAATGAAATTTGTTTGGT CTTTTTTGTAGGAAGAATTTATCTTGGTATGCACAGTGTGGTTGATGTTCTTGCTGGCCTTCTTATTGGACTCGTGATCC TTCCATTTTGGCTCACAGTTGATGGATACATAGACAGTTTTGTGATTTCAGGACAAAATGGTATTCTTACTTCAATTGAA TAAATTCAGCGCAGCATAGCTTTATCCTTTACAATAGCCCAAATGCTGGCAACTGGCTCTCAGATTGTGCAAATTGGATT ACATTTTTAACTATATTCTCAAGGTTTTTAGGATTGCTTTCTTATTTCTTAAACATCTTTTATATGTAAAATGATTAAAA CCACTCAATTTTCCTATGTTTTTTCTCCTTACTCCCTTTTCTTGATGAGTTTTCCTTCTACCCTCTCTTTATCTGAATCT GTTTTTGTTGCAGTTACATCTTTTTGGGCTGCCTTGAGCTTCCTCTTGCTCTTTGCTTATCCAACTCCTGAACTTCCAAC TCCAAGTTTTGAGTTTCACACTGCTTTCAACGGTGTTGCATTGGGAATTGTAAGCAGTTTCTCACCCTTTGACATCATCT AAACTTGTTTCATCTTGATTATTTCATTATGGATGAACATACACCATTTTACATAATTTATTCTTGGTCTAAGGTTAGAC ATTATGGGAGAAAACAGATCATAGGCCAAAAGAAGACGTCTGGTAGTCCTTTAGGATTCGTTTGAGTAGTTCTCCAATAC CAATTAAATACGCCATAAGGCTAGACCAGAGCTTTACTCAGTTTTGGTTTCTCAAATTACTTTTAGTCTTGGATAGATAC ATATTATTCTTATAGGTATTATTTTAGGGTAGGGAAAACTGCAATGAAAAATATTAGGACTTCAGAGTGTGCAATTGTGT CAGACTATTTACTAATTAGCATACTGTATAAAAAAGAACAAGTGAATCTATATGAACATAAAAAGTTCTGACAAATGCCA ACTACAACATATTTTTCACTTCCTTGTTAGAGTAGTCTGAGTAGATGCTGCTGTCTCAGAATTTGTTAAAAGATGGGAAA TGTGAAGACAAGAATCAAGAATGTGTTGACATCTCTATTCTCAAGTATTTGATTAATTTTTTTGGCCCTTAAAGTCTTTG TTTTCTTTTGTTTGGTCTTTGGGCCAGGGTATAGTGGTTAGGTGAAGTTATCGCCTAAGTGTTGGATTCAGGATTCAAAT CCGTAACATTATAAGTTTGTTCAGAGTCATAGTTGGGTAATTGCAGTTTCTAATTTATTATAATTACTATTATTATTGAC AAATTCTCAAGAAACAGTGCAGTGTGGAACACTGGTGTCTTGCTGAATATTAGAATAAAACTTTTGTTGGTACAATATCC TGAGCTTTCTGCATTGAGCAAGGTGTTCTAACAGTCCCTCGGCATGTCACTTATTGCTTGACTTTGCAGAGGGGCAAAAG GGGGGGGGGGGGGGTTCTAATTTCCTTCACTCACTAGTCACTACCCCTTTGAATTATGGAATCAACATGTTGTGGAACTA TACCCTTATGGTCCTATGTGCTTCTGCCCTTTTTGTTTACTATATATCTTTTAGCCTCTCAGGGTTTTCGGTGTTGTATA GCAATAAACCTCCAAGTCATTCCACTTGTGACCGCAACTTCCATGTTACTTCAGTTATTTCAATCCTTTATGGCAAGTAT CTTTGCAGACCGTTCAGATTTTGTAGAAATCAAAGTTATGATATAAATTTGGGGAAGAAGAAATAAATTGAGAGTAACTG TGTAGAATCTCCAGATTCTATGCTTTAGTTAGGTTTGACTTTCCTCAGTCAGCTTTCCTCTCTAAAGTGAGCTTTTTCCT TATTACAGTCGGGCTCTGTTGTAATACTTGAGACAAACTCTTAAAATGATTCTAACTCCTATGTATACACTATTTATCAA TGTGATAGAGATTCAGGGAACATTTTTTGTAACATGATATAGAGTCTCCTTTCAGACCTAAGAACGGTACTTGTATATAT ATGCAATATGCTTTTTCAAGTGACTTTACATCTTCACCCTGAATATTCAAAAGCATAGGGAAATTAGATTGTTGTTGATA AAGACGAGAAGCATTTGCACTTGTATATTTCCTGCTTAGTGGTGTTTCATGTTTTGTAACCTGTACTAATTTCAATGCTT CTGTTCAGGTCTCTGGGGTACAGCAAACTTACCATCTATTTCACCATGATTCTGTTCCTCATTTGTTCTCTTCAGAACTG ACAATACCGGCATATGTGGGAAGAGTGCTGTTGGGAATACCTACAATTCTAATTGTGAAGTTCTGCAGCAAGGCTCTTGC TAAATGGACTCTTCCTGTGGTAGCAAACACCTTGGGCATCCCAATTAAATCAACCAGCTACATCCCCACACTGAATGGAT CCACAGCGGGGAAAACGTCCGATAAGCTCAAAGGAGGAGGTTACTTACAGAAGCTCTTTTCACACAAGGCATTCGATGTT GACACCGGAATTAGATTTCTTCAGTATGCAGGCCTTGCGTGGTCTGTGGTCGACCTCGTGCCATCTCTTTTTTCATACAT GAGCTTGTGACATTGAGATTCTTTATTATTTTATTAAATTTTTGTACAGAAGAAGAATTCATCCCATTTTGATCGTATAC AGTCAAAATGAGCTATCATATCACAACAATAAATCATTTCCACCCTGTGAAATTTAAGCCTAGTGTGATCCCATGTAGGC CCATACTACTTCCCAGTAGGTTTCACAAATTAATCCACGAAACACATTTCTTCAACTTGGCGCAAAAAAATAAAGAAAAA TCTGAATGCACTATTAACTTTGGTTCAAATCAATTTGTTTGCAATCTCATGTTTTTTGACGTTTAATTCACAG
CDS sequence (LotjaGi1g1v0743200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGGTTGAGGGTGCAGGTGCGGGTGCAGCACTGTGGCAAGGTGCGGTTCTGGGTGGAATTCTCTTCTGGGTTGTGTT TTCTTCATACATCAATCTCACTCGCAAGCTTAGATCCTTCCTTCAACCCTCTGTGACTCACCTTGTTGATACCGGAACCC CTATTATCCTTCAGATCCAGGGTTACCGTGCTGGTTTGCTGGATGCTCTTTTCTCTGGGTTGTCTTGTGTTGTTTCTGTT CCCTTTTACACTGCTTTTCTCCCTCTGCTATTTTGGAGTGGTCATGGCAAATTGGCAAGGCAGATGACGTTGTTGATGGC GTTTTGTGATTATATTGGAAACTGCATAAAAGATGTGGTTTCAGCTCCAAGACCTGCTTCTCCACCTGTCTACAGAATAA CTGCTACCAAAGATGAAGAAGAGAACGCCTTAGAATATGGACTTCCTTCTTCTCACACGCTTAATACAGTTTGCTTATCT GGCTACCTTTTGCACTATGTCCTGACTCATCCTCAAATTCAAGGTGCCTATATTAATTATCTTGGAGTTTCTCTCGGTTG CTTGTTTGTGGCTCTCATTGGTTTGGGAAGAATTTATCTTGGTATGCACAGTGTGGTTGATGTTCTTGCTGGCCTTCTTA TTGGACTCGTGATCCTTCCATTTTGGCTCACAGTTGATGGATACATAGACAGTTTTGTGATTTCAGGACAAAATGTTACA TCTTTTTGGGCTGCCTTGAGCTTCCTCTTGCTCTTTGCTTATCCAACTCCTGAACTTCCAACTCCAAGTTTTGAGTTTCA CACTGCTTTCAACGGTGTTGCATTGGGAATTGTCTCTGGGGTACAGCAAACTTACCATCTATTTCACCATGATTCTGTTC CTCATTTGTTCTCTTCAGAACTGACAATACCGGCATATGTGGGAAGAGTGCTGTTGGGAATACCTACAATTCTAATTGTG AAGTTCTGCAGCAAGGCTCTTGCTAAATGGACTCTTCCTGTGGTAGCAAACACCTTGGGCATCCCAATTAAATCAACCAG CTACATCCCCACACTGAATGGATCCACAGCGGGGAAAACGTCCGATAAGCTCAAAGGAGGAGGTTACTTACAGAAGCTCT TTTCACACAAGGCATTCGATGTTGACACCGGAATTAGATTTCTTCAGTATGCAGGCCTTGCGTGGTCTGTGGTCGACCTC GTGCCATCTCTTTTTTCATACATGAGCTTGTGA
Protein sequence (LotjaGi1g1v0743200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEVEGAGAGAALWQGAVLGGILFWVVFSSYINLTRKLRSFLQPSVTHLVDTGTPIILQIQGYRAGLLDALFSGLSCVVSV PFYTAFLPLLFWSGHGKLARQMTLLMAFCDYIGNCIKDVVSAPRPASPPVYRITATKDEEENALEYGLPSSHTLNTVCLS GYLLHYVLTHPQIQGAYINYLGVSLGCLFVALIGLGRIYLGMHSVVDVLAGLLIGLVILPFWLTVDGYIDSFVISGQNVT SFWAALSFLLLFAYPTPELPTPSFEFHTAFNGVALGIVSGVQQTYHLFHHDSVPHLFSSELTIPAYVGRVLLGIPTILIV KFCSKALAKWTLPVVANTLGIPIKSTSYIPTLNGSTAGKTSDKLKGGGYLQKLFSHKAFDVDTGIRFLQYAGLAWSVVDL VPSLFSYMSL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 11 | 11 | - | – | |
| PANTHER | 7 | 410 | 404 | 9.3E-150 | – | |
| PANTHER | 7 | 410 | 404 | 9.3E-150 | – | |
| TMHMM | 10 | 32 | 23 | - | – | |
| Phobius | 12 | 33 | 22 | - | – | |
| Phobius | 34 | 44 | 11 | - | – | |
| Phobius | 45 | 63 | 19 | - | – | |
| SUPERFAMILY | 52 | 228 | 177 | 5.1E-20 | ||
| Phobius | 64 | 68 | 5 | - | – | |
| CDD | 66 | 223 | 158 | 4.22917E-53 | – | |
| Phobius | 69 | 92 | 24 | - | – | |
| TMHMM | 70 | 92 | 23 | - | – | |
| Phobius | 93 | 176 | 84 | - | – | |
| SMART | 99 | 223 | 125 | 4.1E-10 | ||
| Pfam | 101 | 222 | 122 | 1.1E-18 | ||
| Gene3D | 132 | 238 | 107 | 7.5E-17 | – | |
| TMHMM | 152 | 169 | 18 | - | – | |
| TMHMM | 176 | 198 | 23 | - | – | |
| Phobius | 177 | 199 | 23 | - | – | |
| Phobius | 200 | 204 | 5 | - | – | |
| Phobius | 205 | 225 | 21 | - | – | |
| TMHMM | 208 | 225 | 18 | - | – | |
| Phobius | 226 | 231 | 6 | - | – | |
| TMHMM | 232 | 254 | 23 | - | – | |
| Phobius | 232 | 254 | 23 | - | – | |
| Phobius | 255 | 302 | 48 | - | – | |
| TMHMM | 301 | 323 | 23 | - | – | |
| Phobius | 303 | 323 | 21 | - | – | |
| Phobius | 324 | 410 | 87 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0743200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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