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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0743300 |
| Transcript ID | LotjaGi1g1v0743300.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | lipase (DUF620); TAIR: AT5G06610.1 lipase (DUF620); Swiss-Prot: sp|A2SDV6|PANB1_METPP 3-methyl-2-oxobutanoate hydroxymethyltransferase 1; TrEMBL-Plants: tr|I1NAZ2|I1NAZ2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0743300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:131694298..131699010) extracted from Lotus japonicus Gifu genome v1.2.
TCCTTTTAAGAGTGAGTTCCCACACACTACCCTTTTGTCTTTTACATCTCTCTCTGTACGAGAACTATGAGTCAGTAGTT CAGAACCCTCTTTCTCTCTGTTTCACCTTTCAGCAGTGATTAATCACAGTGAGAATTCAGACTGAGCTGAGATATGGGTC GACTCGCCACATTATCAGAAGAACCCATCAACGAGCAAGATGATGATGGAAGAAGGAAAGCATATTGGCGCAAATGGAAC TGGGTGATGTTCAAAACTCACTTCAGCTTCCACAACAAGAAGCCTGACCTCAAAATCCTCCTCAGTGTTCTTGCTTCCCC TCTCTTCCCTGTTCCTCCCAAACCCAAACCACCCATCAATCAGGCAAGCCACCATTTTTCTTCTAGATCATATCATCTAT ATATATGTTTGAACTTTGAATACCAGTTAAGTGCCGTATAAACTGTTTTTCATCCGAACACATAAGGAGTTGTGTTCAGC ACCATTGTCAACAGATATCTAAACATAGCTTATACACGCATTCTATATATTTCTTATTACTTGTCATTTTCCAGTGATTT TAGAAGCATGATATACAGCTTGCTTCATGAATTTTTGAACAATACTATATGTTACTATTTATTTGGTATTAATGATAACA GTGGATGTATATATTCTTTCTACATCTAACACTACTAATAAAGTTAGCACAAAAAGAAAAAAAAATTGTTCTGTAATATG AATGAGGGGAACTATATATTTTGGCCACTTTTCTGAACAATCTTCATACTTCATTTGTACCACCAATAAATAGGTTGTCA TTTCCCAACCCCACTTGCAGGCTCTCTTTTCTTTTGGACCAAAATGAATGTGTCCCTGTCTCTGTTTTTCCATGTGCATC TGATTCACACTAAAGATTGAAACTTTTTGCTTCCCATCCACTACTAACTAGTAACTAGCAGGTTTAAGGCATTTGAATAG TAATGATTAATTATTTATCACTGTTGGTTGTAATTAGTTGTGGTCTTTATTATTTATTTATAGCATGTTAGAATCAACTT CATTTTCATTAGAAACTTTTCTAAGAACACGGAGAAACTTTTTCCCAAAATTGATTATGACTTCAAAATCAATTCATTTC GTAGAAAGATTTTTAAAAATACACTTAATTACTTTTGATGCGATAGCTAGGTGTCAGGATCAGCTCAGTATATCATCCAG CACTTCACGGCAGCAACAGGGTGCCGGAAGTTGGAGGGGAAGGTGAAGAACGTGTTCTCCACAGGGAAGGTGGCGATGGG GGTGGTGGATGAGGTTGGAGGAGTCTCTGAAAAAGGGTGCTTTGTCATGTGGCAAATGGTCCCAGATAAGTGGCAGATTG AGCTGGTTGTGGCCGGCCACAAGGTTGTTGCTGGTTGCGACGGAACCGTCGCGTGGCGCCACACCCCTTGGCTCGGACCT CATGCCGCCAAAGGTGGTGGCGTGCGCCCTCTTCGTCGCGCTATTCAGGCAAGTCCTTTCACTCTTTAGCATGTTTGGTT ACAAAGTACAATGTTTTTTTTTTAGAACCACTTGTGTTTAATACTCCCCAGTAGTTAATATTTTAGCTACTAACTAATGG TGACTTGGTTATGTGCAAATTGTTATAAAATTTCTGAAGTTCTAACTACTGGGGAGTTGTTGGTCTGTTTGTTAATGTTC TTCTTGTTGTCTAGTACTATTTTATTTCTGGCTAAGCAAGGTTTGTTGATATTTAATTCCGAAATTGCTGGTGGTGTTTT TGAGTATTTCTAATGTTTTTGGACACTAGTTCCAATTTAGGGAGCGAGAATTCAATGTGATGTATGCTTTGAATCATGAT GATGCTTGGCTAAATAAATATAGTGTCACATGATAAGTTACACAATGAAAAGTCATGATGAATTAAAATTACGATGAATA GAAATAATTTTTCATTTAACTTTTGTAGTTGTTCACTATGATTTTAGCTTCACAGTGGTTTCTCATTATATATTCGAACA TGCATTCATAATCACAATGGTATGGTATGTATGGCTACATGGTTCAACTTTGTTTATTAAATATATTCATTTGAGGAATG ATCCCCTTTAAAAGTGGGCTTTGGTCAGGTTTGGAATTTAATTACCATGAGAAAAGAGTTACTTTTTTTTTGAACGTGAG AAAAGAGTTACTTAATCTATCTCTTTTTGTCTGCATTCAATAGTTAATTTGTGTCCACTAATCTAAGTCAAGTCAAATAG ATTGTTTATGAACAACACTTTGTAGGATCATCTATAACTAAAATCAAGATCTTGAATAAGAAAAATCCAGCTTCTTATTA CTTGAATATACGGGTGTTGGTGTTACTGAAATAGTATTTTATTATATGAGTAACTAATGTACTCATACTAAAATGTCCAA TTTTTCTACAAAAATCATAAGTGTCGGTTGATGACTGTTTTGGTCCACTTTACTTATTATTATTATTTTTTTATAATGTG GAGGGCTAAAGCCCCTGTTTTGTCCACTTTAATTAATATAGTTGTTTTTTTCCCACATTACCGGCCAATAAATTGGATCT TTGTTTCCCTTCTAAATTCCCTTCCTCTGTTTGATACTTTGATCTATGCACATTCTTCTGTTTCCTTTGTTTATGGGGAG GAATCAAATTCAATTATCACGTGTAATTATTTTGACTTGTTATTTAAGATTCTTTGATTAAAAAAACAAAGCTCAAGATG ACACACAGACAAAGGAATTGAATTTATTGTCATACTGAAATTTCAAACTACTTTTTATGGATCATTAGATTTGGCACCCC AACCATTAGAAATGTCACCCCACTTACGGAAACTCAGTTTCCGAAATATTTCGGAAATAAGGTTTCCGAAGCACTTTTTT ACTCAAAAGTGTGGTTTTTTACTCAAAAGTGTGGTTTTTTACTCAAAAGTGTGGTGTTAGATGTATTTTGAACTAAAAAT CATGAATTAATTTCGGAATCTAAATAATTCGGAACTTGAAAATCCGAAAATTAGGGGTGTGAAATCTAATGGTTGGGGTG GCAAATCTAGCTCTCCTTTTTATGGAAAACGTTGGCTATTGGCCAATCTGGTCCACCCTGCAGCTATGATCTAGAAAATA TATGGTATAGTGACTTGACTTTATCAGCATCTACCATGGTACTCTTGCTGTTACTGTTTTTGTCACCCTTAAAGGACAAA GTGTGCAATTCTCATTTTGTAAAATCACTTTTTAATGATAATATAGAGTTTGTTTGGTTTATTCTTTTTGATGAAGTACC AAATTGTTGTTTCAACAAAAAGTGTTCAGGGTGTCTTATTTTTCACTTTTCATTCTTTCTAATTGTAAATTAAAAGTAAA TTCATGAACAAATTGTGATGAAACTAAAACATGGTGAAAAGCAGCAACCGTTAGTTGCTTTTATGTTACCAGATTCAGGT GATCCTATTATGAAAACAAAACATACTTATAGACGTTTAGGAGTCATAACTGAGGAATTAATTTTAACTCCAAAATCAAT TCTGCATAGAAGTTAGAAAGAGTAGCTTTTGCGTTCAATATAATCCATTATGAGATTTTATAATTGGATTTCACACTATT ACTTAAAAATTAAAATTTTCGCAAATGCGTGTCATAAATCATTTCACTCTCAATTCACTTACACTTATTTTTACCAAAAT TAATTATGAGAACTCTGATACAAACCTGTACAAATTGGTTATAAATGTTGTAGGGACTAGACCCTTTGGCAGTGTCTGCT GTATTCGATGCTGCACAATACATGGGAGAAAAACAAATCTCAGGCATGGATTGTTTTGTGTTGAAGTTATCAGCTGATCA AACGGACTTAGTTGACCGCAGTGATAACACTGCAGAGATGATCAAGCATGTTACATTTGGTTACTTCAGCCAGAGAAATG GATTACTGGTTTATTTAGAAGACTCTTACTTGACAAGGATTCAATCACCTGGTACACACCCCACATACTGGGAAACCACA ATGTCAACAACAATTGAGGATTATAAGCATGTGGATGATGTGATGATTGCACATTCTGGCCAATCAACAGTCATCATCAC AAGGTTTGGGGAAATTTTAAAGGCAGGCCCTTCCATCACACGGTTGGAAGAATCATGGACCATTGATGATGTTGCATTCA ATGTTCCAGGCTTATCCATGGACTGCTTCATACCACCCAAGGAACTCCAGAAAGATTATCCACAAGAAGATCTAGATTGG AGGTCACCCTTACATAGATGATATTTTCGGTCTTTGATGAGGGATGTCAAACTGTTTGAGAAACTGTAGTTGTCCTCCCC GACAAATGACATTTTTAGGGTTTGAAATTGTGTTATTATCTTGTGCGAAGTCTAGCTTTCTTACCACTAGACCAACACCT TGTTGGATTTCATTTTGCTTTTTTGAGCTAAAGATATGGTTGATGCTAATTGTCTCATAATATATTAGAATGCTTTGTAA CTGTATTAGTGGATTACTGATTCTGTGCATAATAAATGTCAGTTGTTAATTGTGTCTGGAGCTTATTTTTGTGTTCTTTG TTCAATCCTGGGTTTGTATCCTACCATAATGGATCAATAAAGCAAATAGCTTGCTGATGTAATTGAGCTTGCGAGCCTGA ACATGAAATCTGGCTCTCTGAACATTTATCAGGATATCTACGAGCTTTGAGCAATCAGTCTCTCAAAAAACCT
CDS sequence (LotjaGi1g1v0743300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGTCGACTCGCCACATTATCAGAAGAACCCATCAACGAGCAAGATGATGATGGAAGAAGGAAAGCATATTGGCGCAA ATGGAACTGGGTGATGTTCAAAACTCACTTCAGCTTCCACAACAAGAAGCCTGACCTCAAAATCCTCCTCAGTGTTCTTG CTTCCCCTCTCTTCCCTGTTCCTCCCAAACCCAAACCACCCATCAATCAGGTGTCAGGATCAGCTCAGTATATCATCCAG CACTTCACGGCAGCAACAGGGTGCCGGAAGTTGGAGGGGAAGGTGAAGAACGTGTTCTCCACAGGGAAGGTGGCGATGGG GGTGGTGGATGAGGTTGGAGGAGTCTCTGAAAAAGGGTGCTTTGTCATGTGGCAAATGGTCCCAGATAAGTGGCAGATTG AGCTGGTTGTGGCCGGCCACAAGGTTGTTGCTGGTTGCGACGGAACCGTCGCGTGGCGCCACACCCCTTGGCTCGGACCT CATGCCGCCAAAGGTGGTGGCGTGCGCCCTCTTCGTCGCGCTATTCAGGGACTAGACCCTTTGGCAGTGTCTGCTGTATT CGATGCTGCACAATACATGGGAGAAAAACAAATCTCAGGCATGGATTGTTTTGTGTTGAAGTTATCAGCTGATCAAACGG ACTTAGTTGACCGCAGTGATAACACTGCAGAGATGATCAAGCATGTTACATTTGGTTACTTCAGCCAGAGAAATGGATTA CTGGTTTATTTAGAAGACTCTTACTTGACAAGGATTCAATCACCTGGTACACACCCCACATACTGGGAAACCACAATGTC AACAACAATTGAGGATTATAAGCATGTGGATGATGTGATGATTGCACATTCTGGCCAATCAACAGTCATCATCACAAGGT TTGGGGAAATTTTAAAGGCAGGCCCTTCCATCACACGGTTGGAAGAATCATGGACCATTGATGATGTTGCATTCAATGTT CCAGGCTTATCCATGGACTGCTTCATACCACCCAAGGAACTCCAGAAAGATTATCCACAAGAAGATCTAGATTGGAGGTC ACCCTTACATAGATGA
Protein sequence (LotjaGi1g1v0743300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGRLATLSEEPINEQDDDGRRKAYWRKWNWVMFKTHFSFHNKKPDLKILLSVLASPLFPVPPKPKPPINQVSGSAQYIIQ HFTAATGCRKLEGKVKNVFSTGKVAMGVVDEVGGVSEKGCFVMWQMVPDKWQIELVVAGHKVVAGCDGTVAWRHTPWLGP HAAKGGGVRPLRRAIQGLDPLAVSAVFDAAQYMGEKQISGMDCFVLKLSADQTDLVDRSDNTAEMIKHVTFGYFSQRNGL LVYLEDSYLTRIQSPGTHPTYWETTMSTTIEDYKHVDDVMIAHSGQSTVIITRFGEILKAGPSITRLEESWTIDDVAFNV PGLSMDCFIPPKELQKDYPQEDLDWRSPLHR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 338 | 338 | 3.5E-173 | – | |
| PANTHER | 1 | 338 | 338 | 3.5E-173 | ||
| Pfam | 93 | 331 | 239 | 4.8E-103 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0743300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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