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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0748300 |
| Transcript ID | LotjaGi1g1v0748300.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Nicotianamine synthase; TAIR: AT5G04950.1 nicotianamine synthase 1; Swiss-Prot: sp|Q9XGI7|NAS_SOLLC Nicotianamine synthase; TrEMBL-Plants: tr|B9A9Z1|B9A9Z1_LOTJA Nicotianamine synthase; Found in the gene: LotjaGi1g1v0748300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:132077361..132078809) extracted from Lotus japonicus Gifu genome v1.2.
ACCGAAAATACATTTTTTTTTAGTAATTAACCAAATACAAATTCAATGTTTATTTTCCAAGGTGGTGATTGTGGACCCCA CAGTTGTGCATAAATATTGACCCCTCCTTGTGCCCTGCGTGTGTCTAACATAAGCTTCTTGAGCCAAACAAGTCTTCCCA CACAACAACACTACAACCTCATCATAGTGTCGACATGGTTTGCCAAGAAGAGCTCTTGATTGAAAAAGTCTGCTCCCTCT ACTCACAAATCTCCACTCTCGAATCTCTCAAACCCAGCAAAAATGTCGACACCCTCTTCACCGAGCTTGTCCTCACATGC ATGCCACCTAGCCCCATCGATGTCACAAACCTCACAAAAAACGTTCAAGACATCCGATCCCACCTCATAAGACTCTGTGG TGAAGCTGAAGGCCATTTGGAGAGTCACTACTCAACAATCCTAGGCTCACACAAAAACCCTCTTGACCATCTTCACATCT TCCCTTACTATAACAACTACCTCAAACTTGGTCTCCTTGAGTACACTATCCTTACCCAAAATTCCATCCATGTCCCTGAA AAAATTGCTTTTATTGGTTCAGGTCCTCTCCCTCTCACTTCCATTGTGTTAGCCTCAAACCACTTAATCTCCACAACTTT CCATAACTATGATATAGACTCTTCAGCCAATTCAAGTGCTCAGAAACTGGTTTTATCTGACCCTGATTTGTCAAACCGCA TGGTTTTTCACACCAGTGATATACTAGACGTGACAAAAGAGTTAGAGGACTATGATGTTGTGTACTTGGCTGCACTTGTT GGCATGAACAAGGAGGAAAAGAATCGGATCATTGATCATTTGGCTAAGTACATGGCTCCAGGTGCTGTTCTGATGCTGAG AAGTGCTCATGGGGCTCGTGCTTTTCTATACCCGGTGGTTGAGGCTTCTGATCTTCAAGGCTTTGAGGTTCTCTCTGTTT TCCACCCCACTGATGAGGTTATCAATTCTGTTGTTATAGCAAGGAAATATAGTACTACTCCTTCAACACACTCACTTGAT CAGGGTCTTGTTGGCTCTATGATTTTACCAAACAAGTGTTCTGATGAGATTCAAGTCTTCATTCCCCTCAATCATGTTGA GGAGTTAACCGTTGAGGAGCAACTCTCGTGAAAACTTTACTCTGTGTTTTATTTGATTTATCTACTATACTCAATGTCTT CACATCATCACATGATTGCTTCAGATGAGGATATGGAGATCATGCATGTGGTGGTGCTAGCAACTTAGTTAATATTTCCA TTTATATATGTCTGAATGCTTCGTGTCTGGTGGAGCAAAATGTAAGAGATTTTCATGATGTTGTTCTTAAATTTTCAATA AATATAAGAGATTTATGAGTTTTAGATCAGTGGTCTCTTGAGCAAATCATAATGACATAAACACAGCATGGCTGCAGCCA TATTCTCTG
CDS sequence (LotjaGi1g1v0748300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTTTGCCAAGAAGAGCTCTTGATTGAAAAAGTCTGCTCCCTCTACTCACAAATCTCCACTCTCGAATCTCTCAAACC CAGCAAAAATGTCGACACCCTCTTCACCGAGCTTGTCCTCACATGCATGCCACCTAGCCCCATCGATGTCACAAACCTCA CAAAAAACGTTCAAGACATCCGATCCCACCTCATAAGACTCTGTGGTGAAGCTGAAGGCCATTTGGAGAGTCACTACTCA ACAATCCTAGGCTCACACAAAAACCCTCTTGACCATCTTCACATCTTCCCTTACTATAACAACTACCTCAAACTTGGTCT CCTTGAGTACACTATCCTTACCCAAAATTCCATCCATGTCCCTGAAAAAATTGCTTTTATTGGTTCAGGTCCTCTCCCTC TCACTTCCATTGTGTTAGCCTCAAACCACTTAATCTCCACAACTTTCCATAACTATGATATAGACTCTTCAGCCAATTCA AGTGCTCAGAAACTGGTTTTATCTGACCCTGATTTGTCAAACCGCATGGTTTTTCACACCAGTGATATACTAGACGTGAC AAAAGAGTTAGAGGACTATGATGTTGTGTACTTGGCTGCACTTGTTGGCATGAACAAGGAGGAAAAGAATCGGATCATTG ATCATTTGGCTAAGTACATGGCTCCAGGTGCTGTTCTGATGCTGAGAAGTGCTCATGGGGCTCGTGCTTTTCTATACCCG GTGGTTGAGGCTTCTGATCTTCAAGGCTTTGAGGTTCTCTCTGTTTTCCACCCCACTGATGAGGTTATCAATTCTGTTGT TATAGCAAGGAAATATAGTACTACTCCTTCAACACACTCACTTGATCAGGGTCTTGTTGGCTCTATGATTTTACCAAACA AGTGTTCTGATGAGATTCAAGTCTTCATTCCCCTCAATCATGTTGAGGAGTTAACCGTTGAGGAGCAACTCTCGTGA
Protein sequence (LotjaGi1g1v0748300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVCQEELLIEKVCSLYSQISTLESLKPSKNVDTLFTELVLTCMPPSPIDVTNLTKNVQDIRSHLIRLCGEAEGHLESHYS TILGSHKNPLDHLHIFPYYNNYLKLGLLEYTILTQNSIHVPEKIAFIGSGPLPLTSIVLASNHLISTTFHNYDIDSSANS SAQKLVLSDPDLSNRMVFHTSDILDVTKELEDYDVVYLAALVGMNKEEKNRIIDHLAKYMAPGAVLMLRSAHGARAFLYP VVEASDLQGFEVLSVFHPTDEVINSVVIARKYSTTPSTHSLDQGLVGSMILPNKCSDEIQVFIPLNHVEELTVEEQLS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 316 | 316 | 4.3E-145 | – | |
| ProSiteProfiles | 1 | 276 | 276 | 58.647 | ||
| PANTHER | 1 | 316 | 316 | 4.3E-145 | ||
| Pfam | 5 | 273 | 269 | 2.2E-129 | ||
| Gene3D | 6 | 273 | 268 | 8.6E-65 | – | |
| SUPERFAMILY | 134 | 262 | 129 | 5.07E-7 | ||
| CDD | 153 | 228 | 76 | 0.00247133 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Nicotianamine synthase activity | Catalysis of the reaction: 3 S-adenosyl-L-methionine(1+) = 3 S-methyl-5'-thioadenosine + 3 H(+) + nicotianamine. | ||
| Biological process | Nicotianamine biosynthetic process | The chemical reactions and pathways resulting in the formation of nicotianamine, 2(S),3'2(S),3''(S)-N-(N-(3-amino-3-carboxypropyl)-3-amino-3-carboxypropyl)-azetidine-2-carboxylic acid. |
Expression pattern of LotjaGi1g1v0748300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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