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GO:0030418

Overview

Field Value
Namespace Biological process
Short description Nicotianamine biosynthetic process
Full defintion The chemical reactions and pathways resulting in the formation of nicotianamine, 2(S),3'2(S),3''(S)-N-(N-(3-amino-3-carboxypropyl)-3-amino-3-carboxypropyl)-azetidine-2-carboxylic acid.
Subterm of

Relationships

The relationship of GO:0030418 with other GO terms.

Relationship type GO terms
Is a
Regulates n.a.
Part of n.a.
Positively regulates n.a.
Negatively regulates n.a.

Ancestor tree

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Additional data

This table contains additional metadata associated with the GO entry's definition field.

Field Value
GOCmah
PMID
Nicotianamine chelates both FeIII and FeII. Implications for metal transport in plants.
Plant Physiol. ; 119 (3): 1107–14.PMID: 10069850

Nicotianamine (NA) occurs in all plants and chelates metal cations, including FeII, but reportedly not FeIII. However, a comparison of the FeII and ZnII affinity constants of NA and various FeIII-chelating aminocarboxylates suggested that NA should chelate FeIII. High-voltage electrophoresis of the FeNA complex formed in the presence of FeIII showed that the complex had a net charge of 0, consistent with the hexadentate chelation of FeIII. Measurement of the affinity constant for FeIII yielded a value of 10(20.6), which is greater than that for the association of NA with FeII (10(12.8)). However, capillary electrophoresis showed that in the presence of FeII and FeIII, NA preferentially chelates FeII, indicating that the FeIINA complex is kinetically stable under aerobic conditions. Furthermore, Fe complexes of NA are relatively poor Fenton reagents, as measured by their ability to mediate H2O2-dependent oxidation of deoxyribose. This suggests that NA will have an important role in scavenging Fe and protecting the cell from oxidative damage. The pH dependence of metal ion chelation by NA and a typical phytosiderophore, 2'-deoxymugineic acid, indicated that although both have the ability to chelate Fe, when both are present, 2'-deoxymugineic acid dominates the chelation process at acidic pH values, whereas NA dominates at alkaline pH values. The consequences for the role of NA in the long-distance transport of metals in the xylem and phloem are discussed.

Associated Lotus transcripts 6

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

Transcript Name Description GO terms GO count
Nicotianamine synthase [Lotus japonicus] gi|223588270|dbj|BAH22562.1| 2
PREDICTED: nicotianamine synthase-like [Cicer arietinum] gi|502088019|ref|XP_004488704.1| 2
Nicotianamine synthase [Lotus japonicus] gi|223588272|dbj|BAH22563.1| 2
Nicotianamine synthase; TAIR: AT5G04950.1 nicotianamine synthase 1; Swiss-Prot: sp|Q9XGI7|NAS_SOLLC Nicotianamine synthase; TrEMBL-Plants: tr|B9A9Z1|B9A9Z1_LOTJA Nicotianamine synthase; Found in the gene: LotjaGi1g1v0748300 2
Nicotianamine synthase; TAIR: AT5G56080.1 nicotianamine synthase 2; Swiss-Prot: sp|Q9XGI7|NAS_SOLLC Nicotianamine synthase; TrEMBL-Plants: tr|A0A072V9C6|A0A072V9C6_MEDTR Nicotianamine synthase; Found in the gene: LotjaGi3g1v0145000 2
Nicotianamine synthase; TAIR: AT5G04950.1 nicotianamine synthase 1; Swiss-Prot: sp|Q9XGI7|NAS_SOLLC Nicotianamine synthase; TrEMBL-Plants: tr|I3SNB0|I3SNB0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0258100 2

Co-occuring GO terms 1

A list of co-occurring GO terms within the L. japonicus gene space:

GO term Namespace Name Observations Saturation (%)
Biological process Nicotianamine biosynthetic process 1 16.67