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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0751400 |
| Transcript ID | LotjaGi1g1v0751400.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Aspartic proteinase; TAIR: AT1G11910.1 aspartic proteinase A1; Swiss-Prot: sp|P42211|ASPRX_ORYSJ Aspartic proteinase; TrEMBL-Plants: tr|A0A0B2SEY7|A0A0B2SEY7_GLYSO Aspartic proteinase; Found in the gene: LotjaGi1g1v0751400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:132370104..132373534) extracted from Lotus japonicus Gifu genome v1.2.
ATGGGGTCGAAGCATTTCCTGGCGGCATTCTGTTTATGGGCTTTAACATGTTCCCTGCTTCCCTCTTTCTCCTTTGGAAT TCTGAGAATTGGTTTGAAGAAGCGACCTCTAGATCTTCAAAGTATTAATGCTGCTAAAAAGGTAAGCGGAGAACTGAGAT CAGTAAGACCAATGTTGGGTGCACTGGATCTGAATATTGGAAAGCCGGATGGTGAAGCTATTGTACCTTTGAAGAATTAT TTGGATGCTCAGTATTTTGGTGAGATTGGAATTGGCACACCCCCACAGACCTTTACTGTCATATTTGATACTGGTAGCTC CAACCTTTGGGTTCCATCATCAAAGTGTTACTTTTCTGTGAGTACAACTTAAGTCGTGTCTCCAAAACTATATACATGTA AGAGTATCCTATTGACAAATATTCTTTTTCAGCTTGCCTGCTATACCCATAATTGGTACAAGGCAAAGAAATCCAAAACA TATGTCAAAAATGGTAATGTTTGATTCTCATTATTCATGTTCATTAAAGCAATACCGTGATAGATACATGCATTAAATAA CATGATGCTGCTTGTGTGTGCGTGTGCGCACCATTTAATGTAAGTTTATTCACACCTCTCAACTTGTTGATCAGGAACAT CTTGCCAAATAGCCTATGGATCTGGAGCAATCTCTGGTTTCTTCAGTCAAGATCATGTTAAAGTTGGTGGTGCTGTTGTC AAGCATCAGGTGAGTGCTCTAATTACGAGCTTCAGCTTTAATAGAAATTGTACATATTTGCAGCAATACTCACAAATGTC ACTACTTTTAACTGTAGGATTTCATCGAAGCTACCCGAGAAGGAAGCCTTGCCTTTCTGTCAGGGAAGTTTGATGGAATA TTTGGGCTTGGATTTCAGGAGATTTCAGTTGGAAAATCTGTGCCAGTATGGTAAGTTTCGACTGGTCTTTTGTTGATCAT GTTAGATTGACATGCTGTGAATTGTTTCTGTGCTTTTAATTCATTGGTGCATCTTAAAATCACAGGTACAATATGGTGGA GCAAAATCTTGTTGGTGAGAAGGTCTTCTCTTTTTGGCTCAATGGGGATCCTAATGCGAAAAAGGGTGGTGAACTAGTTT TTGGTGGTGTTGACCCAAAGCATTTCAAAGGACAACACACTTATGTTCCAGTCACTAAAAAGGGTTACTGGCAGGTTAGG AAAACAAAATTTAGTCTGATCTGGAATTCCGTTTTAAATATGTAAGTTTCAGAAAATATTTGACACAATTTTTCTTTTTC AGATTGAAATGGGAGATTTTTTCATTGGAGGTCTTTCAACAGGTGAGTTTATGATTCCTCAACAATAAGAAAAAAATTTC TGTCGAGGATTTACTAAGAAATAAGGGAGTGATGAGTGGTTGAAACTTGAAAGGATATGGAATAATGAGAAAACATGGAA TGTATTTTTACCCTCTCTCATACTTCATTGCATTTAAACCATGGGGAATGTTAACAAATAGGAAATGGGCCTCACCAAAT AAGGAGTGGGGCATACATGGAATTTGTTTAGTGTTCCACAAGCATTTCGCTTTTAAAAAAATGATCTGTCAATTAAGGTT ATCTTTAGTCTTTACAGACATCTATGTTTACTTTTTGCATATGCTTTGATTCCAAAGTGTATCTAATCCTGAAATATAAT GTTATTTTTAGGTGTTTGTGAGGGTGGCTGTGCTGCTATTGTGGATTCAGGAACATCTTTGCTTGCTGGTCCAACTGTAT GTGCTTCCATATTTCTTAAAAACATGTTTTTCTCATAGATTTTCATTTATAATCTCTGTTGACTGTTAATTAATGACAGC CTGTTGTGGCTGAAATCAACCATGCTATTGGAGCTGAAGGAGTTCTGAGTGTAGAATGTAAGGAAGTTGTTTCTCAATAT GGAGAGTTGATATGGGATCTCTTAGTATCAGGGGTAAGTTTTCCTGCCTTCTCTATGAAGTTTTGTATTGAACATCTATT GCGGCCTGTAATCTTTTCGTATTTGCATTCCCATGCTTGGAGTTTGGACCTAAAAGAGTTTGATCTTAATCTGCAGGTAC AACCTGGTGACGTTTGTTCTCAAGTTGGTCTATGTTCTGCCAAAAGGGTTCAATCTAAGAGGTTAGGAGGGTCTTTACTT GATGAGCCTTTTATATATCAATCTCTTGTCCTAATTTCTGCTTTCATTGTTTGCATTGTTCAATTGGGTAATAATTTGAA GGTATTAGATGGATGCTTAAGTCTTAAAGATTATAAAGGTCAGAAAGTCAGAAGCATCAGCTCCTTGCATAAGCAAATAA GATAAAGAACAAAAAAATTCTGAACAATAGCTTGTCAAGAAACCTCCGTTATACTTACTAATTATTTATTCTTTAGCCAC TGGGTCAGTTTAGGTCTTGACTTCATTGTCTTGTGCTGCAATATTTTGGCTCAAACAGACTCTTAAATTAACTTTGAATT CTATTACTGGTAGTGCTGAGATTGAGATGGTGACTGAAAAGGAGCAGGAAGAGTTATCAGCTCGAGATACTCCTTTGTGT TCTTCTTGTCAGATGCTTGTTGTTTGGGTCCAGAATCAACTAAAACAAAAGGCGACTAAGGAGAGGGTATTCAACTACGT GAACCAAGTAAGCCCTTTGAACGATCCTTTCCAAAAGCTCAATTTGTAGTTTACATCTGTACGGGTATAAACATGTCGTG AGCGTTTGTTTTTATTATCGGCAGCTGTGCGAGAGTCTGCCAAGTCCATCTGGAGAGTCAGTGATAAGCTGTGATAGTCT TTCCCGGATGCCGAACATTACATTCACCATTGGAGGCAAACCTTATGTCCTCACACCAGAGCAGGTTAGGATAATCTAAC ATATATAATCCAAATGGGCACATGCATGAATCAAATGGCTAATTGAACGACAAAGTACAAACAATGTTGTCAATATCTAT AGATAAGTGCATGTGTGGAAATTCTTCTAGAAAAAATTGATGTTAAAGCTAAAATCATAATTTCTAAGAGAAAGCTTCTG GACACCAAAATTGATTCTGAGAAAAAGTAAGCAAACAAACATGCTATAAGGCTAACTCGTGAGTGATTTTTTGTCTTGAT TCTTAAAATTCTATTTGTGCTTTCAGTACATTCTGAGAACTGGAGAAGGCATTACAGAAGTCTGCCTTAGCGGGTTTATT GCTCTTGATGTTCCTCCTCCAGCTGGTCCACTCTGGTATAGTACTTTTTATAAATTATTTATCAATTTGAATGGTTCAGA ACAATCATGAATGAAGAGAATTACATAAGCTTTTCTAATGCTACTACGATCTGCGTGCTGCTGCAGGATTCTTGGAGATG TTTTCATGAGGGTATATCACACTGTCTTTGACTACGGAAATCTCCAACTTGGTTTTGCTGAAGCTGCCTAA
CDS sequence (LotjaGi1g1v0751400.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGGTCGAAGCATTTCCTGGCGGCATTCTGTTTATGGGCTTTAACATGTTCCCTGCTTCCCTCTTTCTCCTTTGGAAT TCTGAGAATTGGTTTGAAGAAGCGACCTCTAGATCTTCAAAGTATTAATGCTGCTAAAAAGGTAAGCGGAGAACTGAGAT CAGTAAGACCAATGTTGGGTGCACTGGATCTGAATATTGGAAAGCCGGATGGTGAAGCTATTGTACCTTTGAAGAATTAT TTGGATGCTCAGTATTTTGGTGAGATTGGAATTGGCACACCCCCACAGACCTTTACTGTCATATTTGATACTGGTAGCTC CAACCTTTGGGTTCCATCATCAAAGTGTTACTTTTCTCTTGCCTGCTATACCCATAATTGGTACAAGGCAAAGAAATCCA AAACATATGTCAAAAATGGAACATCTTGCCAAATAGCCTATGGATCTGGAGCAATCTCTGGTTTCTTCAGTCAAGATCAT GTTAAAGTTGGTGGTGCTGTTGTCAAGCATCAGGATTTCATCGAAGCTACCCGAGAAGGAAGCCTTGCCTTTCTGTCAGG GAAGTTTGATGGAATATTTGGGCTTGGATTTCAGGAGATTTCAGTTGGAAAATCTGTGCCAGTATGGTACAATATGGTGG AGCAAAATCTTGTTGGTGAGAAGGTCTTCTCTTTTTGGCTCAATGGGGATCCTAATGCGAAAAAGGGTGGTGAACTAGTT TTTGGTGGTGTTGACCCAAAGCATTTCAAAGGACAACACACTTATGTTCCAGTCACTAAAAAGGGTTACTGGCAGATTGA AATGGGAGATTTTTTCATTGGAGGTCTTTCAACAGGTGTTTGTGAGGGTGGCTGTGCTGCTATTGTGGATTCAGGAACAT CTTTGCTTGCTGGTCCAACTCCTGTTGTGGCTGAAATCAACCATGCTATTGGAGCTGAAGGAGTTCTGAGTGTAGAATGT AAGGAAGTTGTTTCTCAATATGGAGAGTTGATATGGGATCTCTTAGTATCAGGGGTACAACCTGGTGACGTTTGTTCTCA AGTTGGTCTATGTTCTGCCAAAAGGGTTCAATCTAAGAGGTTAGGAGGGTCTTTACTTGATGAGCCTTTTATATATCAAT CTCTTGTCCTAATTTCTGCTTTCATTGTTTGCATTTGCTGA
Protein sequence (LotjaGi1g1v0751400.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGSKHFLAAFCLWALTCSLLPSFSFGILRIGLKKRPLDLQSINAAKKVSGELRSVRPMLGALDLNIGKPDGEAIVPLKNY LDAQYFGEIGIGTPPQTFTVIFDTGSSNLWVPSSKCYFSLACYTHNWYKAKKSKTYVKNGTSCQIAYGSGAISGFFSQDH VKVGGAVVKHQDFIEATREGSLAFLSGKFDGIFGLGFQEISVGKSVPVWYNMVEQNLVGEKVFSFWLNGDPNAKKGGELV FGGVDPKHFKGQHTYVPVTKKGYWQIEMGDFFIGGLSTGVCEGGCAAIVDSGTSLLAGPTPVVAEINHAIGAEGVLSVEC KEVVSQYGELIWDLLVSGVQPGDVCSQVGLCSAKRVQSKRLGGSLLDEPFIYQSLVLISAFIVCIC
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 6 | 6 | - | – | |
| Phobius | 1 | 24 | 24 | - | – | |
| PANTHER | 4 | 363 | 360 | 5.3E-152 | – | |
| PANTHER | 4 | 363 | 360 | 5.3E-152 | ||
| TMHMM | 5 | 27 | 23 | - | – | |
| Phobius | 7 | 20 | 14 | - | – | |
| SUPERFAMILY | 9 | 317 | 309 | 4.55E-92 | ||
| Phobius | 21 | 24 | 4 | - | – | |
| Phobius | 25 | 386 | 362 | - | – | |
| Gene3D | 74 | 258 | 185 | 2.5E-124 | ||
| Pfam | 84 | 318 | 235 | 6.2E-95 | ||
| ProSiteProfiles | 85 | 386 | 302 | 52.777 | ||
| PRINTS | 91 | 111 | 21 | 1.3E-20 | ||
| ProSitePatterns | 100 | 111 | 12 | - | ||
| PRINTS | 237 | 250 | 14 | 1.3E-20 | ||
| Gene3D | 259 | 314 | 56 | 2.5E-124 | ||
| SMART | 279 | 351 | 73 | 0.0016 | ||
| ProSitePatterns | 287 | 298 | 12 | - | ||
| PRINTS | 287 | 298 | 12 | 1.3E-20 | ||
| ProSiteProfiles | 315 | 355 | 41 | 12.341 | ||
| Gene3D | 315 | 356 | 42 | 2.5E-124 | – | |
| SUPERFAMILY | 316 | 359 | 44 | 3.4E-10 | ||
| Pfam | 319 | 351 | 33 | 4.4E-13 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Aspartic-type endopeptidase activity | Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which a water molecule bound by the side chains of aspartic residues at the active center acts as a nucleophile. | ||
| Biological process | Proteolysis | The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds. |
Expression pattern of LotjaGi1g1v0751400.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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