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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0752300 |
| Transcript ID | LotjaGi1g1v0752300.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Nitrate transporter 1.2; TAIR: AT1G69850.1 nitrate transporter 1:2; Swiss-Prot: sp|Q8H157|PTR19_ARATH Protein NRT1/ PTR FAMILY 4.6; TrEMBL-Plants: tr|V7CYU6|V7CYU6_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0752300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:132485950..132489479) extracted from Lotus japonicus Gifu genome v1.2.
GAAGAACAGAAGCTGCTGGCACAATGGAAGAGAAGAAAAGGTGGATTCAGAGCTTCCATGTTCATTTTTGGTAAGTGAAG GAAGAAAAAAAAACTCTGTTAGCCTATTTGAATCTGCTTCTCTTTTATCAAAATCAATTCTGGCATCCAAATGCTGTTAC TCACTCAAGTCTCCTCATAATCAATTATAGAACTATGCACTTTGTTTGTTCTGTGCTTTGTTAGCAAGGTATATTAAGCA TTTTCTCCCTTCTATTAACTGTTCCTTCTTCTACATGTGTAGTGTTGTCAGCATTGGACAACATGGGTTTTGTGGCAAAC ATGGTGAGCTTAGTGCTGTATTTTTATATGGTGATGCACTTTGATCTGTCCAGTTCTGCCAACACTCTCACAAACTTTAT GGGTTCAACTTTCTTGCTTTCCCTTGTTGGAGGCTTCATCTCAGACACTTACCTCAATAGATTCACCACATGCTTGCTTT TTGGATCACTTGAGGTTCTGGTAAGTGGTAAACAAATGATGTCTTTAAGATTCAAAATCCTAATGGCCTACACAATTATA ATAACCACCTAGTTCATTAAGCATTATAGGAATCATCAGAATCAATTCTGAAACTTAGTGACTACTCAGAGAAACTTCTT CCCGCTTCAGAATCAATTATAGAATAATTTCTAAATATGTATTTAAATTTGTATCTGATTTAACAAATGCAGGCTTTGAC AATGCTCACAGTTCAAGCTGGTTCAGATCATCTACACCCAGATGCTTGTGGCAAGTCAAGCTGTGTGAAAGGTGGCATAG CATTCATGTTCTACACATCATTGTGTTTGATGGCATTGGGCATAGGAGGAGTCAGAGGATCCATGACACCATTTGGTGCT GACCAATTTGATGAAAAGGATCAAATTGAAGCAAAAGCACTTGCAAGCTTTTTCAATTGGCTTTTGCTCAGTTCAACTCT AGGAGCAATTACTGGTGTCACTGGTGTTGTGTGGGTTAGTACCCAAAGAGCTTGGCATTGGGGTTTTTTCATAATAACCA TAGCGTCCTCTATTGGCTTTGTGATCCTTGCTCTTGGTAAGCCATTCTACCGCATCAAAATCCCTGGAGATAGCCCCACT TTGAGGATTGCTCAGGTATGTTTTATTTTAGCATGTTTTGATCAGCTTATTTTCCTCGCACATCAATTCTGACCCTCAAT AACTACTCACAGAAACTAAATTTCTCGATTAGCGTATTTTTGTCAGAATTAATTCTGACACTCAGAAGCTACACACATAA ATTTCAAGCCATATAGAATCAATTGTACATAAGCACATTCAATTTAAAATATGATCAGAATTAACCATTTTTTGTTGTTA TTAAGTACAGGTTATTGTTGTGGCTTTTAAAAACAGAAAGCTGTCACTGCCAGAGTCACAGGAAGAACTATATGAGATCA GTGATAAAGATGCTGCAGTGGAGAAGATTGCCCACACCAACCAGATGAGGTGAATTTTCATGCTAAAGAAGTTTCATTTT TAACAAGTTGCATACTACACAAATGAAGGCTAATAATAACTTTGTGCAATAAACAAAAAGAGGGTTCTGCAAATTGGCAT GTTAGGATTCTTTTCCACGTACTTGGTATTAGGTAATGCCAAGGACTAGTCTGGGCCCATTACCACCTCTGCACGGTTAG GTGCAGCAGAGATATGGAGAATGATCATGGAAGGAAAAAAAAGAAAAATATCTATGCCGTGTGTGAACTGCTAAACACAA AATAAAAGTTTTCTGACAAAATTAATGAAGAGGTCTTTTAGAAGAACAGTACAGGGTGGTGCAATCAATGTTTTTTTTTC TCTGAAAAATATCATCAAACTCAGGGAATAACAGCACCTGCCATTAGTACATTTGGATTAGCTTCACATTCATCAATCAA TTCTAAAACTCGTTAGCTACTTTCTTCCAATAAATTATTCTAGCTTCAATTAATTGAAAATAGCCTCTTCCCCAATTTGG GTTCCTGCAATCATTGATCTATCAAAAATTTTACGCTACAAAACTTGGACCATAAGATCAAGATCGTCGGGCTCATATTT AACAATTTAAGCCATACGAGCTTGATCAGAGCTCAGATTTGTTAGCTGCGTGAATTTACGGACTATCTGATTGTAGACCA TCCAAATTCCTCCAAACATGTACTTTTTATGTTTTGTTTAGGAATGGTAAATGGGCTCCTCTACTCTTATACCATTAAAA AAGGGTGTCCAAACATGAAGAGTCTGTTTACAAAACTTGAACCCCTAACCTCAGTCTCATGGCAATAGACAGTTGCGCCA AACTCCACTTGTACTCTTTTACCATGACCTAATGAGAATTAAAACTTTAAAGGCATTTGGTTCATCAAAATGATTTCTTC TTCTTTATTTACATTTAATTATTTTATTGCTAAAATCATAGCCTTCCCATGTACAATAATTGATTGATGACATTATGACA AGATAGCTTAAAATGTTCTTTCCACACTCATACATGCTTGTTGATTCAGGTCTCTAGATAAAGCAGCCATTCTCCAAGAT AACTTAAAACCTCAGCCATGGAAGGTTTGCACGGTGACACAAGTTGAAGAAGTGAAGATCCTAACTAGAATGCTACCCAT AGTAGCCAGCACAATCATAATGAACACATGTTTGGCACAGCTTCAAACATTCTCAGTTCAACAAGGGAATGTAATGAACC TAAAACTTGGCTCTTTTACAGTGCCTGCAGCATCCATTCCTGTTATCCCCCTTATTTTCATCAGCATCCTGGTTCCCTTG TATGAGTTGTTCTTCGTGCCATTCGCGCGAAAGATCACTCATCATCCTTCAGGAATCACACACCTTCAAAGGGTAGGTGT TGGTTTGGTACTCTCATCCATATCAATGGCAGTGGCTGGGATTATTGAGGTGAAAAGAAAAGACCAAGGAAGAAAAGACC CATCTAAGCCCATAAGCCTATTTTGGCTTTCTTTCCAATATGGTATATTTGGAATTGCTGACATGTTCACACTTGTTGGA CTCCTTGAATTTTTCTACAGAGAATCACCTGCAAACATGAAATCACTCTCAACCTCTTTGACATGGTTATCAATGTCTCT TGGTTACTTCTTGAGCACTGTTTTTGTCAATGTCATCAATGCTATTACTAAAAGGATCACTCCTAGCAAACAAGGATGGT TGCATGGGTTTGACTTGAACCAAAATAATCTGAACCTTTTCTATTGGTTCCTAGCCATACTTAGCACACTTAATTTTTTC AACTACCTTTATTGGGCTTCCAGGTACAAGTACAAATCTGAAGAAAGCAATTCAAGCACAGGTTTTAATGGTTTAGTTGA AATGCATCTTGGGGCAAAGCAAGACTGGGAAGCCAATGGTGAACCACCCACCCATCGTGACCGAGAGATTTAAGATCTTA TGCCTCCATTTGGTGTCTAACCGAATGACAATGAGAGTGAGACTGCTATAGTATCAGAATGTACTAAGAAGCTTTGGGAT GTGGAAATAG
CDS sequence (LotjaGi1g1v0752300.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTCATTTTTGTGTTGTCAGCATTGGACAACATGGGTTTTGTGGCAAACATGGTGAGCTTAGTGCTGTATTTTTATAT GGTGATGCACTTTGATCTGTCCAGTTCTGCCAACACTCTCACAAACTTTATGGGTTCAACTTTCTTGCTTTCCCTTGTTG GAGGCTTCATCTCAGACACTTACCTCAATAGATTCACCACATGCTTGCTTTTTGGATCACTTGAGGTTCTGGCTTTGACA ATGCTCACAGTTCAAGCTGGTTCAGATCATCTACACCCAGATGCTTGTGGCAAGTCAAGCTGTGTGAAAGGTGGCATAGC ATTCATGTTCTACACATCATTGTGTTTGATGGCATTGGGCATAGGAGGAGTCAGAGGATCCATGACACCATTTGGTGCTG ACCAATTTGATGAAAAGGATCAAATTGAAGCAAAAGCACTTGCAAGCTTTTTCAATTGGCTTTTGCTCAGTTCAACTCTA GGAGCAATTACTGGTGTCACTGGTGTTGTGTGGGTTAGTACCCAAAGAGCTTGGCATTGGGGTTTTTTCATAATAACCAT AGCGTCCTCTATTGGCTTTGTGATCCTTGCTCTTGGTAAGCCATTCTACCGCATCAAAATCCCTGGAGATAGCCCCACTT TGAGGATTGCTCAGGTTATTGTTGTGGCTTTTAAAAACAGAAAGCTGTCACTGCCAGAGTCACAGGAAGAACTATATGAG ATCAGTGATAAAGATGCTGCAGTGGAGAAGATTGCCCACACCAACCAGATGAGGTCTCTAGATAAAGCAGCCATTCTCCA AGATAACTTAAAACCTCAGCCATGGAAGGTTTGCACGGTGACACAAGTTGAAGAAGTGAAGATCCTAACTAGAATGCTAC CCATAGTAGCCAGCACAATCATAATGAACACATGTTTGGCACAGCTTCAAACATTCTCAGTTCAACAAGGGAATGTAATG AACCTAAAACTTGGCTCTTTTACAGTGCCTGCAGCATCCATTCCTGTTATCCCCCTTATTTTCATCAGCATCCTGGTTCC CTTGTATGAGTTGTTCTTCGTGCCATTCGCGCGAAAGATCACTCATCATCCTTCAGGAATCACACACCTTCAAAGGGTAG GTGTTGGTTTGGTACTCTCATCCATATCAATGGCAGTGGCTGGGATTATTGAGGTGAAAAGAAAAGACCAAGGAAGAAAA GACCCATCTAAGCCCATAAGCCTATTTTGGCTTTCTTTCCAATATGGTATATTTGGAATTGCTGACATGTTCACACTTGT TGGACTCCTTGAATTTTTCTACAGAGAATCACCTGCAAACATGAAATCACTCTCAACCTCTTTGACATGGTTATCAATGT CTCTTGGTTACTTCTTGAGCACTGTTTTTGTCAATGTCATCAATGCTATTACTAAAAGGATCACTCCTAGCAAACAAGGA TGGTTGCATGGGTTTGACTTGAACCAAAATAATCTGAACCTTTTCTATTGGTTCCTAGCCATACTTAGCACACTTAATTT TTTCAACTACCTTTATTGGGCTTCCAGGTACAAGTACAAATCTGAAGAAAGCAATTCAAGCACAGGTTTTAATGGTTTAG TTGAAATGCATCTTGGGGCAAAGCAAGACTGGGAAGCCAATGGTGAACCACCCACCCATCGTGACCGAGAGATTTAA
Protein sequence (LotjaGi1g1v0752300.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MFIFVLSALDNMGFVANMVSLVLYFYMVMHFDLSSSANTLTNFMGSTFLLSLVGGFISDTYLNRFTTCLLFGSLEVLALT MLTVQAGSDHLHPDACGKSSCVKGGIAFMFYTSLCLMALGIGGVRGSMTPFGADQFDEKDQIEAKALASFFNWLLLSSTL GAITGVTGVVWVSTQRAWHWGFFIITIASSIGFVILALGKPFYRIKIPGDSPTLRIAQVIVVAFKNRKLSLPESQEELYE ISDKDAAVEKIAHTNQMRSLDKAAILQDNLKPQPWKVCTVTQVEEVKILTRMLPIVASTIIMNTCLAQLQTFSVQQGNVM NLKLGSFTVPAASIPVIPLIFISILVPLYELFFVPFARKITHHPSGITHLQRVGVGLVLSSISMAVAGIIEVKRKDQGRK DPSKPISLFWLSFQYGIFGIADMFTLVGLLEFFYRESPANMKSLSTSLTWLSMSLGYFLSTVFVNVINAITKRITPSKQG WLHGFDLNQNNLNLFYWFLAILSTLNFFNYLYWASRYKYKSEESNSSTGFNGLVEMHLGAKQDWEANGEPPTHRDREI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 11 | 11 | - | – | |
| Gene3D | 1 | 527 | 527 | 2.3E-154 | – | |
| CDD | 1 | 516 | 516 | 1.69404E-179 | – | |
| PANTHER | 4 | 533 | 530 | 0.0 | – | |
| PANTHER | 4 | 533 | 530 | 0.0 | ||
| TMHMM | 7 | 29 | 23 | - | – | |
| Phobius | 12 | 31 | 20 | - | – | |
| Phobius | 32 | 42 | 11 | - | – | |
| TMHMM | 39 | 58 | 20 | - | – | |
| Phobius | 43 | 62 | 20 | - | – | |
| Phobius | 63 | 68 | 6 | - | – | |
| Pfam | 65 | 481 | 417 | 3.0E-82 | ||
| TMHMM | 65 | 87 | 23 | - | – | |
| Phobius | 69 | 86 | 18 | - | – | |
| Phobius | 87 | 105 | 19 | - | – | |
| Phobius | 106 | 125 | 20 | - | – | |
| TMHMM | 107 | 129 | 23 | - | – | |
| SUPERFAMILY | 109 | 523 | 415 | 2.22E-11 | ||
| Phobius | 126 | 145 | 20 | - | – | |
| Phobius | 146 | 171 | 26 | - | – | |
| TMHMM | 150 | 172 | 23 | - | – | |
| Phobius | 172 | 176 | 5 | - | – | |
| Phobius | 177 | 198 | 22 | - | – | |
| TMHMM | 177 | 199 | 23 | - | – | |
| Phobius | 199 | 291 | 93 | - | – | |
| TMHMM | 289 | 311 | 23 | - | – | |
| Phobius | 292 | 312 | 21 | - | – | |
| Phobius | 313 | 331 | 19 | - | – | |
| TMHMM | 331 | 353 | 23 | - | – | |
| Phobius | 332 | 352 | 21 | - | – | |
| Phobius | 353 | 372 | 20 | - | – | |
| Phobius | 373 | 392 | 20 | - | – | |
| TMHMM | 373 | 392 | 20 | - | – | |
| Phobius | 393 | 411 | 19 | - | – | |
| TMHMM | 412 | 434 | 23 | - | – | |
| Phobius | 412 | 434 | 23 | - | – | |
| Phobius | 435 | 454 | 20 | - | – | |
| TMHMM | 447 | 469 | 23 | - | – | |
| Phobius | 455 | 474 | 20 | - | – | |
| Phobius | 475 | 493 | 19 | - | – | |
| TMHMM | 494 | 513 | 20 | - | – | |
| Phobius | 494 | 513 | 20 | - | – | |
| Phobius | 514 | 558 | 45 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi1g1v0752300.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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