Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

LotjaGi1g1v0753300.2

Overview

Field Value
Gene ID LotjaGi1g1v0753300
Transcript ID LotjaGi1g1v0753300.2
Related isoforms 1
Lotus japonicus genome version Gifu v1.2
Description Glucose-1-phosphate adenylyltransferase; TAIR: AT1G27680.1 ADPGLC-PPase large subunit; Swiss-Prot: sp|P55230|GLGL2_ARATH Glucose-1-phosphate adenylyltransferase large subunit 2, chloroplastic; TrEMBL-Plants: tr|I1NBK6|I1NBK6_SOYBN Glucose-1-phosphate adenylyltransferase; Found in the gene: LotjaGi1g1v0753300
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr1:132621751..132626256) extracted from Lotus japonicus Gifu genome v1.2.

TATAGAATGTTTTGTTCTACGGAGAAATCTTTAGAATCACTTATGGTTAGAAGCTACAAGTCTTACCGATTGAGTAAATG TGCGTTGAATTCTGAGAAAATTGTGAAACTAAACATGGACTTAGTTCGTGTTACTAATTTTGTTATTTGATTTTACCTGG TTACTCAAATATAAAAAATTACTCATGGTCATGTAAAGCTTGTTCTTTTTAACAGGATATGAGAACATGAATATGAATTC ACCTATATAATATTAATTGCCTTTCAGGCCCTTAGATCAGCAAGACTTGGAGGGCCAGCAGCCAACTCAAAAACTGTTGC ATCCATCATATTGTGTGGTGGAGCTGGAACTCGTCTATTCCCTCTAACTCAAAAAAGGGCTAAACCTGCTGTAAGTTATT AAATTCACTAATCTATTTGTCTTTTTAGCGTGTGTTTGGATTCTAGTTGAGTGCTATGTGAAGGGATTTTTATCTCAATG TTAAAATGTTCTTCCAGAACTAGGCTTAAATTTATCTGTTCTTTGTGTCATTTTATGATGCTCAGGTCCCAATTGGAGGA TGCTATAGGCTGGTGGACATACCATTAAGTAATTGTATCAATAGTGGAATTAATCAAATTTTCGTCCTTACACAATTTAA CTCTCGGTCCCTCAACTGCCACATTGCTCGAACGTATAATCTAGGAGGCTGCGTCAACTTTGGAGGTGGTTTTGTTGAGG TACGCCTCACCATCACTCATTATATCTCTCATTTCTTTTTTTCTTCTTTTTCACTCTAGATGGAGGTAGAAAGGAGTGTG AATAAAACATTAGTGTTATTTTTCAATTTGTATTTCATTGTTATAGTTACTATTTTTTACCTTGCCCTTGATTCATGCCT AGGGCTACACACTTATTTACAAGGTGTACATTACTTACATAGACTAAAAGTTTGTTGTGGTAGATATTGGCAGCAACTCA AACACCTGGTGAATCAGGAAATAAATGGTTTCGGGGTACTGCTGATGCTGTAAGACAATTCCTTTGGATGTTTGAGGTAT GCCATAATTATTTTTCCTATTCAATTCATAAAATTATATTTGGCAAAATATTCCTTTTGTATAACCACAAGTTTAAGATA TGAGTAGAAATGGATTCATGTCATTCCTACATTTGTGTTAGAAGTATAATATAAAATTATTCTTGTATCTTCACCGGTAT TTGGTTCATGACAATTTAAAACTCTGATTGAGTTTCTGGAACTTGGGTAGGATGCTGAGCATAAAAACATAGAGAACATC CTGATATTGTGTGGAGATCAGCTATATCGAATGGACTACATGGAACTTGTGCAGGTTGACGTTATTAGCTGTTAATGTGG TTTGTTTTTTTTTTCTGATTAATTAACTTTCACTGTGAATATTTCACTTGACAACTAATCTCACCTGCAGAAGCATGTTA ATTCATGTGCTGATATATCAGTATCCTGTCTCCCAGTGGATGCCAGGTATTACAAGTAAAGTTTCTTCTAAGGCCAATCA CATATTCAGGCGCTGAAAAATTAACATTTTTCTTCTTTATGACCTGTAGTCGCGCCTCTGATTTTGGACTAGTGAAGGTT GATGAAAGAGGACGGGTACGCCAGTTCTTGGAAAAACCCAAGGGCGAATCTTTAAGATCTATGGTTGTTATTCTTTAAAT TTCTACTTAAAATATTGAGTGGTGATTTGTCCACTACAAATTCAGTTTTTAATATGAAATCATCTCTCTCTGATTGATGA TGTACTTGTTCTCACAGCATGTAGATACAAGTGTTTTTGGATTATCAGCTCAAGAAGCCAGGAAATTTCCATATATTGCA TCAATGGGTATATACGTGTTTAAAATAGATGTACTGCTAAAACTTCTCAGGTAATTAAGTTTCTTTGTTCAAATATCAGT TTAATAACTTGGAGGTGATTCTATAAAATTAGTATTGATCTAATGTACATAAGCACACAAATATGCAGCAAAAGATATTC TGATGTTGCTCATATATATCAAGTTCTAAGAATCCGTAGAGTTAGAAATGTTGGAAATTCAAGAATGAGTGATAAGTCCA ACATTGTATAGAAATGGATTAAGCATGGTTACATCAATTATACTGTCAAATATGGAAAACTTTGGATGAACCAATGACTG TTTTTTATTCTAAACTCAGATAAATATGATGTGACTTTCATTTTTCTTTGATCATGAATTTGTAGGAGTAGTTATCCTAA TGCAAATGATTTTGGATCCGAGGTCATTCCAATGGCTGCAAAAGATTTTAATGTCCAGGTAAGTAGGTAACTGTATTTTG CTGAATGTTCTCTCAAACTAGTCTTTGAAGAATGCCCTGAGCTATCATATTCTGTTTTAATAGCTGATAATCAAATTTAG ACCTTCTATTTCATCACAGGCATGTCTTTTCAGTGGTTATTGGGAGGATATTGGGACTATAAAATCTTTCTTTGATGCAA ACTTGGCTCTTATGGACCAGGTAGGTTTTTTAGCATTTAGGAGTTGAAAACCAAATCTTTCTTTATAGCATGTTTCGACC AATTTCCCTTTCCTCAATTAACTCTGACAATAAAGCTACTCATAGAAAGCTTGTCCCCATATTTGATTTTGTGTTTAGAA TCAATCATAGAAAGGTTTTCAAACATGCACTTATACAAGCTGCAATTTATTGTTCTTCCATGTTGAAGCCGCCCAAGTTT CAGCTGTATGACCAGTCAAGACCTATTTTTACTTCCCCTCGTTTCCTACCACCAAGTAAAATGGAGAAGTGCCAGGTAAG ACTGTTAAGTTTTATAGCATGTTTGGATCAGTTTCTCTTCATTCGAATGAATTCTGAAACTCAAAAGCTACTCACAAAAG CTTCTATCCAGAATTGATTCTGGCTTCAAAATCAATCGTAAAATAGTTTCCTAACATACACTATTGCACCTAGTCCAGAT AAATGAATTTTTATGATTCTAAAGGGACCTAATGAGATTGTGCAATAACTTAAATTGTAGGTATTAAATTCCTTGATTTC AGATGGTTGCTTTTTAAGAGAGTGCAGTGTTGAACATTCCATTGTTGGAATCCGCTCAAAAATTGATTCTGGAGTGCAGC TAAAGGTAAACGTTTGTTTTCTTAAATGGAGATCATGAACAAAGAGTTTCCTTGTCCAATGTTCTCATATTTTTCATTCC TGAACTCTTACTTAGTACTTACATTTATGATTACTTTACAGGATACATTGATGATGGGTGCTGACTATTACCAAACAGAG GCTGAAATAGCAGCTCTTTTAGCAGCTGGAAATGTTCCAATAGGTATTGGTAAAAATACCAAAATCATGTAAGAATCCTG AAAAGGCTTTGTCATAATTTCACATTATACAGCAACATGCATGAACACAGCTACATGACGTTGAAGTACACTAAGTGCAT GTTTGGAAATCCTTCTATATTGGATTCTAAAGCCAAAATCAATTATGGGGAGAAGGTTATGTGAGTAAATTCTGGGTGTC AAAATTGATTCTGAGAGAATGTAAATCGATCCAAACAAGCTAATATACTTATGTGCACATAGACACATAAAGAGATATAA ATAAAATGATGAAAATAAGCAATTTGCTTTTTCCCTTAATGCTGGGATTGAATTGGAGAAGTTCAAGTTCTATAACAAGC TTCACTTGACCTGCTGTGTTGACCAACATAATTGTTATCACACTTGTATTCTTCTAAAGTAGAAATATATACAATAAGGG TTCATATGATATTTCTATGTGGAGTTTTATCATGACTGTTTCTTTCTCTCCTGTTATGAATTTTCCTAGATTTCATACAC ATGCTAGTCTATGTTATGACTCATGCTAATCTTACATGCAGGAATTGTATAATTGACAAAAACGCAAGAATTGGAAACAA TGTAATAATTGCAAACAAAGAAGTGAGTACTAATTTAGTTGTCTATGTTCTCTAATTTCTCCAGCCAGTTTCTTTTTGAA GTTCTTTCTTTTTCTTTCTTCCAAAGAAGGGGCAAATGGTTTCTTTGTAAATAGTTGAAGATTTCTCTACATCTAAGACC TTTGAGAGAGACCACTGTTTAACTTCACTTCCACAAGTGTAGCATGTTACATGTCAATATATGGCTCGCATGAGTTGCAT ATATCATATATGTATACACACATAGCATCTTTAGAACAACTTCTCTTCCGTCAAAATCAATTCTGAAATACTGAGAAAAA AAATTACCCTTTGACACATCATAGTTAAATTGAAGGACAAAAAATACCAGATGATTGAACATCCATGTAAAATTGTTTAC ACTGTGCGTATGCTAATTAAATTCTAATATTACTAACTAATATTTTCTCTTTCTTTTTCTTTGGCTAAAATGATTGGGGT GCAGAATGTACAAGAAGCTGATAGACCCTCAGAGGGGTTTTATATTCGATCAGGGATCACAGTGGTGTTAAAAGACTCTG TAATAAGCAATGGTACAATCATTTAA
Download Genomic Sequence

CDS sequence (LotjaGi1g1v0753300.2) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGTTTTGTTCTACGGAGAAATCTTTAGAATCACTTATGGTTAGAAGCTACAAGTCTTACCGATTGAGTAAATGTGCGTT GAATTCTGAGAAAATTGCCCTTAGATCAGCAAGACTTGGAGGGCCAGCAGCCAACTCAAAAACTGTTGCATCCATCATAT TGTGTGGTGGAGCTGGAACTCGTCTATTCCCTCTAACTCAAAAAAGGGCTAAACCTGCTGTCCCAATTGGAGGATGCTAT AGGCTGGTGGACATACCATTAAGTAATTGTATCAATAGTGGAATTAATCAAATTTTCGTCCTTACACAATTTAACTCTCG GTCCCTCAACTGCCACATTGCTCGAACGTATAATCTAGGAGGCTGCGTCAACTTTGGAGGTGGTTTTGTTGAGATATTGG CAGCAACTCAAACACCTGGTGAATCAGGAAATAAATGGTTTCGGGGTACTGCTGATGCTGTAAGACAATTCCTTTGGATG TTTGAGGATGCTGAGCATAAAAACATAGAGAACATCCTGATATTGTGTGGAGATCAGCTATATCGAATGGACTACATGGA ACTTGTGCAGAAGCATGTTAATTCATGTGCTGATATATCAGTATCCTGTCTCCCAGTGGATGCCAGTCGCGCCTCTGATT TTGGACTAGTGAAGGTTGATGAAAGAGGACGGGTACGCCAGTTCTTGGAAAAACCCAAGGGCGAATCTTTAAGATCTATG CATGTAGATACAAGTGTTTTTGGATTATCAGCTCAAGAAGCCAGGAAATTTCCATATATTGCATCAATGGGTATATACGT GTTTAAAATAGATGTACTGCTAAAACTTCTCAGGAGTAGTTATCCTAATGCAAATGATTTTGGATCCGAGGTCATTCCAA TGGCTGCAAAAGATTTTAATGTCCAGTTTAGACCTTCTATTTCATCACAGGCATGTCTTTTCAGTGGTTATTGGGAGGAT ATTGGGACTATAAAATCTTTCTTTGATGCAAACTTGGCTCTTATGGACCAGCCGCCCAAGTTTCAGCTGTATGACCAGTC AAGACCTATTTTTACTTCCCCTCGTTTCCTACCACCAAGTAAAATGGAGAAGTGCCAGGTATTAAATTCCTTGATTTCAG ATGGTTGCTTTTTAAGAGAGTGCAGTGTTGAACATTCCATTGTTGGAATCCGCTCAAAAATTGATTCTGGAGTGCAGCTA AAGGATACATTGATGATGGGTGCTGACTATTACCAAACAGAGGCTGAAATAGCAGCTCTTTTAGCAGCTGGAAATGTTCC AATAGGTATTGGTAAAAATACCAAAATCATGAATTGTATAATTGACAAAAACGCAAGAATTGGAAACAATGTAATAATTG CAAACAAAGAAAATGTACAAGAAGCTGATAGACCCTCAGAGGGGTTTTATATTCGATCAGGGATCACAGTGGTGTTAAAA GACTCTGTAATAAGCAATGGTACAATCATTTAA
Download CDS Sequence

Protein sequence (LotjaGi1g1v0753300.2) extracted from Lotus japonicus Gifu v1.2 Proteins.

MFCSTEKSLESLMVRSYKSYRLSKCALNSEKIALRSARLGGPAANSKTVASIILCGGAGTRLFPLTQKRAKPAVPIGGCY RLVDIPLSNCINSGINQIFVLTQFNSRSLNCHIARTYNLGGCVNFGGGFVEILAATQTPGESGNKWFRGTADAVRQFLWM FEDAEHKNIENILILCGDQLYRMDYMELVQKHVNSCADISVSCLPVDASRASDFGLVKVDERGRVRQFLEKPKGESLRSM HVDTSVFGLSAQEARKFPYIASMGIYVFKIDVLLKLLRSSYPNANDFGSEVIPMAAKDFNVQFRPSISSQACLFSGYWED IGTIKSFFDANLALMDQPPKFQLYDQSRPIFTSPRFLPPSKMEKCQVLNSLISDGCFLRECSVEHSIVGIRSKIDSGVQL KDTLMMGADYYQTEAEIAALLAAGNVPIGIGKNTKIMNCIIDKNARIGNNVIIANKENVQEADRPSEGFYIRSGITVVLK DSVISNGTII
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR43523
30 490 461 2.7E-279 –
PANTHER
PTHR43523:SF15
30 490 461 2.7E-279 –
Gene3D
G3DSA:3.90.550.10
39 355 317 1.1E-89
IPR029044
SUPERFAMILY
SSF53448
48 451 404 4.12E-73
IPR029044
TIGRFAM
TIGR02091
50 454 405 4.9E-133
IPR011831
Pfam
PF00483
51 335 285 1.4E-71
IPR005835
CDD
cd02508
52 321 270 1.05225E-75 –
ProSitePatterns
PS00809
146 154 9 -
IPR005836
ProSitePatterns
PS00810
261 271 11 -
IPR005836
SUPERFAMILY
SSF51161
352 490 139 8.12E-26
IPR011004
Gene3D
G3DSA:2.160.10.10
356 490 135 1.1E-50 –
CDD
cd04651
358 484 127 4.39721E-33 –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0005978
Biological process Glycogen biosynthetic process The chemical reactions and pathways resulting in the formation of glycogen, a polydisperse, highly branched glucan composed of chains of D-glucose residues.
Subterm of
GO:0008878
Molecular function Glucose-1-phosphate adenylyltransferase activity Catalysis of the reaction: alpha-D-glucose 1-phosphate + ATP = ADP-glucose + diphosphate.
Subterm of
GO:0009058
Biological process Biosynthetic process The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones.
Subterm of
GO:0016779
Molecular function Nucleotidyltransferase activity Catalysis of the transfer of a nucleotidyl group to a reactant.
Subterm of

Genome browser

Expression data

Expression pattern

Expression pattern of LotjaGi1g1v0753300.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…