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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0756600 |
| Transcript ID | LotjaGi1g1v0756600.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Nitrogen regulatory protein P-II like; TAIR: AT4G01900.1 nitrogen regulatory P-II-like protein; Swiss-Prot: sp|Q9ZST4|GLNB_ARATH Nitrogen regulatory protein P-II homolog; TrEMBL-Plants: tr|I3T553|I3T553_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0756600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:132987712..132991887) extracted from Lotus japonicus Gifu genome v1.2.
AATTTATTCAGCTTATTTAATATGGTCGGTGAGAAAGACAGAGAGTGAGTGCTGAAGAGAGAAGCAATGGCGATTGCGAG AACGCACATGTTTGGTGTTGTGAATTTTCAGCTCAACGAAGCTCCAATGGCTTTTGCAGGTTCCAGCGCGATCCTCTGGC ATCACGGAGAGCGTTCGCAGCGCAATGTGGCCCTAAGACGCAGAGGAAATGCCATGATTGTTCCCAGAATCAGAGCTCAG AGTTCTGCTTCTGGTGCGAATTTCTACCTTCGATCTTTGTTCACCAACACTCAAATCGTGTTTGTTACTAAACTTCTTGT TTTGCAACTTGCTCTCTCTCCCAGAATATGTTCCAGATTCCAAGTTTTACAAAGTGGAAGCAATTCTCAGGTTTGAGCCC TTTCCGTTTATGCATGATGCAAATTGTGTATCATTGAGTTAAGAAATCACTGTGAAAATGCATAATATATTCAACTGACT GCTTGAACATGCATAACTGATTCCAACTAACTTTCCCTCAATCAACCATAACTAGCTTGAGTGCTTGACTGCAAACTAGG TGAGAATTCAATTTGATAGGAAAGGTAGGATTAGCTGCTATATATCGAGAGACTTGGTGAGCTTGCATGCTGGATTATGC TTGGCTGGTGTGACTGTGTGTACTGCTTTACTGCATAATAGGATGTAATGGCATTTTGTAGTTACCTACTTATACGTTAG ATGCTTCTAAATATGATGTTGAATTTCTTGTCGAACAGGCCCTGGCGAGTCCCTCTTGTTTCTTCGGTAAGACATTATTA CCTTTTCATCGCTTTCCTTATATGTAAATGCAATGTGAAACTTGTTAAAGTCACTGTATTGGATGCTTAAGTACATTGGC TTTTTATACCTATGCTTTCTTAAAGTTGAGCTAAGCAGTATATTTCCCGCAGTTGGTAATTGGTGCGAGTTCAAGAGTGC TTGTTTTTTCTTGTTTCTAGTAATAATGTTGTGCTGAAAAAATTGAAAATACTGCACTGATTGCTCACTGAATACATATA GGATTGGACATGGGTAGGCGTTGTGCTATTGTACTTAATAAGCTTATTGACACTTGGCATATGCTCATACTACTTTTTTT CTTAATTCAAAGGCTTTGTTGAATATGGGAATCCGTGGTGTCACTGTATCTGATGTCAGAGGCTTTGGTGCTCAGGGTGG TTCAAAAGAGAGGCAGGGAGGTAAGTCTATCACTGACTACTAGTAGTTAAAAACTGAAGATACACCCTCCTGGAAATAAG GTTCCTCAGTCTGTCTTTAAAATGAAGAAGTAGGGGTATGCTTACCCTTATTTATTCTGAAATGCATTGTGATCTTAATG CACTGAAGTTCAAGGTTAAATTACCCTTACTTGTTAACATAAGATATGAACTCAATTTAGAATTTGGAGTGTTTTTTTTT TTGGTCATCCTGCATATTTGCATGACATTTTTCATATTCATTATTGTAGTCTGGGTAGTTGAATTTGTTACTTAAAAAAT ACTTAACTTTCAACTTAATCCCTTAAAATGTGTGCTAATTACTGCATTTCTCTGATTGATCCACAAATTGGGAAGTCTCT TTTTAGTTTTTTCCCTATCTTTATCCCAACGAGCCAAAACCAAAGCTTTATTATTATCTTTTGTTGCAGAATAGTTCTAG TTAGTCTTGAATAAGCCAAACAACACAAATTTAGGCCTCTGGAGTGTGGCCAACCAACTTCAGTTGTTTTTTAAGTTTGT TACTTTTGTTAATCATGTGTAATTCGAGAAATATATTTTGTCCATTGGGATAGAATTGTATACAGACGTTTATACATATA GGTCACATGCTCACTTACATCAGTCTTATATTAATAGTGTGTTCTTCACAGGCTCTGAATTTTCTGAAGACAATTTTGTT GCCAAAGTTAAAATGGAAATAGTGGTGAGAAATGACCAGGTGTGTAAACATTTGGCAGTAATTTTACTGGCATCAAGCAT TATAATTTATCGTGTACTTTTCTTATTAATGTAATACTGTAATTTGTTAGGTAGGGAAAGGAAGAGTTCTCGCTTCCTGT TAGCATGCCCTTGACAACAGAACTTGTTGTTTTGTTGTTAAACACTGCACTTTTAAATGCTTAAAATTATGGTAATGAAT ATGATAATGTCCATAACTGATGGATTTGATGCTCCAAATTTTCATAGGTTAACTGATTTGGATCTTCTCAGGTTTCATGA CCAAACCTATTGGATGGAGAAAAGTGCAAACTTTGTTTTAAATTTAATGGATATGATAATTCCATGACCACTGGATATGC CTTTTTTGTCTCTTTTGAACTCTTGCATGACTTGTCATTGTATGCATGTGTTTGGAATTTTATTTTGTTTATTTTTTATA GCATAGGACACAATAAGCAATTCTGCTGCTGTTTTTAATTTGTTGTCACATCAATTTTTTTGAGACATTCACTGAATAAA ACTTCACCATACTTTAAGGACAAACATAATGTTAGTTTCGGCAGCATGTCTGAAATAATGTCAAACATTTCTGCAGGTTG AGGCTGTGATAGACAAAATAATTGAGGAGGCAAGGACTGGGGAGATTGGTGATGGCAAAATTTTCTGTAAGGCCTGAAAT CCTAAAAATACCTTATGTAGCAGTAAATTATACATTGGGGTTCATATGCAGCTTTCTCTATTTTGCATGTGTTTGGATCA TTATGCTATGTGCCCTTCTAGTGTAGGAATTAATGCATCCTTTTAGTCAGTTATGCTTATTCTCTCTTACAGCTTTCACC CTTCTTGGTGTCTTGAGAGAACAGACTATCTGTGTTGAAATGTAGAGCTGAATAGCTAAATTTCGTTTTCAATAATGATT TGTAATTCCTTCTTTCACCTAAGCAAGAAAAAATGATTTTTCAACAGTGAGAAAAAGTTAAAATGAACTGTGCAGTCTGA GAAAACTGAAATTGTGGAATTTGAGTTTAACAATTTTTATCTTTCTTTGTTGGTTATTCTGATTGTGAATATAGTTCTCT CAGTTGGAAAACACAACCTGATGTGAAGTACAGTTTAGGAGTGAACAATCCAGAAATTGCATGTTTCCTCAAAGGATGGG CCTTTTAATTTACTTTGACGTTATTCTATTCTCAGATTTTAGTTGTACTTTTCTTGTATGCTAAACTCATCAGAATCTTG AATTTATTAGATCACCTAGAAAAAAAGGTTTTTCTTATGATTCAAGAATGATTAGGTTGTTTGAAATATAAGCACTTGAA TTTTAATGCTCATTTCACGTATCATGTGCTGAGTTGCCTCAGTTCTCATAGTGAACAAATTTGAGGATGGGATAAGAATT AATACTACAATTTCTAGATTCAGCAAGCAAATCTATTGGCTTCACTTTAGAATGATGTTTCTAATACAATTTCGATTGTG CAGTGATCCCAGTGTCAGATGTTATAAGAGTTCGCACAGGTAAGCATTTGTTTCCCCAAGATATTGAAATGAAAAAAAAA ATTGTGTCTTCAGCGTATATACTCATGTTTCAAGTATGAGCTTTTCAGGTGAGCGTGGGGAACAGGCAGAGAGGATGACT GGGGGGCGAACTGACATATTATCTACTGTATGACTGGTTGAAGGGAGTGATCAGCATTCAGTCCTCTGGTCTCATTACCC ATTCTCCTTGGTGGGATTGGTTACCATGTTGTATGCTTTATATACTCTGCACTTTGCTGTTAGAAAATCTACAATGGCAA TGTTGAAAGGACAATGTAGTTATGTAGTGAAGAAAACTGTGAAACAATAATCAAGTCAGCTTAGTTGCTGAAAGTTAATG TGAGTTTGTTAATATTTGATTGTGAATCCAATTCAGTCTGTTTTGTATGATAAATTTTTTAAATAAGCACAAAGGACATA AGCACTCAGCTTGTTACAAATGAATTCAATACGGGAGAATGTCACGTAGTTGATCTTTAATTACTATTGAGGTAGCTAGT GATGATACATCCAGAAAGCATTTTTTCTCTAATAAAATGACAATCCATTATGTGTTTGATTATCTCATAAAAAACTGGGT TGGAGGCAATGTGAAGAGCAGTTTGATTATCATATCAATTATCAGCTCATATTTGTAAATTTTAGTTCTTGAATTAGTTG TTTAACTCATATGTGA
CDS sequence (LotjaGi1g1v0756600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGATTGCGAGAACGCACATGTTTGGTGTTGTGAATTTTCAGCTCAACGAAGCTCCAATGGCTTTTGCAGGTTCCAG CGCGATCCTCTGGCATCACGGAGAGCGTTCGCAGCGCAATGTGGCCCTAAGACGCAGAGGAAATGCCATGATTGTTCCCA GAATCAGAGCTCAGAGTTCTGCTTCTGAATATGTTCCAGATTCCAAGTTTTACAAAGTGGAAGCAATTCTCAGGCCCTGG CGAGTCCCTCTTGTTTCTTCGGCTTTGTTGAATATGGGAATCCGTGGTGTCACTGTATCTGATGTCAGAGGCTTTGGTGC TCAGGGTGGTTCAAAAGAGAGGCAGGGAGGCTCTGAATTTTCTGAAGACAATTTTGTTGCCAAAGTTAAAATGGAAATAG TGGTGAGAAATGACCAGGTTGAGGCTGTGATAGACAAAATAATTGAGGAGGCAAGGACTGGGGAGATTGGTGATGGCAAA ATTTTCTTGATCCCAGTGTCAGATGTTATAAGAGTTCGCACAGGTGAGCGTGGGGAACAGGCAGAGAGGATGACTGGGGG GCGAACTGACATATTATCTACTGTATGA
Protein sequence (LotjaGi1g1v0756600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAIARTHMFGVVNFQLNEAPMAFAGSSAILWHHGERSQRNVALRRRGNAMIVPRIRAQSSASEYVPDSKFYKVEAILRPW RVPLVSSALLNMGIRGVTVSDVRGFGAQGGSKERQGGSEFSEDNFVAKVKMEIVVRNDQVEAVIDKIIEEARTGEIGDGK IFLIPVSDVIRVRTGERGEQAERMTGGRTDILSTV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 4 | 195 | 192 | 1.6E-89 | – | |
| PANTHER | 4 | 195 | 192 | 1.6E-89 | ||
| Gene3D | 58 | 192 | 135 | 1.3E-52 | ||
| ProSiteProfiles | 70 | 182 | 113 | 34.991 | ||
| PRINTS | 71 | 86 | 16 | 2.2E-29 | ||
| SUPERFAMILY | 71 | 181 | 111 | 8.9E-32 | ||
| Pfam | 73 | 175 | 103 | 2.1E-32 | ||
| SMART | 73 | 175 | 103 | 2.5E-43 | ||
| PRINTS | 92 | 110 | 19 | 2.2E-29 | ||
| PRINTS | 122 | 145 | 24 | 2.2E-29 | ||
| PRINTS | 153 | 173 | 21 | 2.2E-29 | ||
| ProSitePatterns | 153 | 166 | 14 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Regulation of nitrogen utilization | Any process that modulates the frequency, rate or extent of nitrogen utilization. | ||
| Molecular function | Enzyme regulator activity | Binds to and modulates the activity of an enzyme. |
Expression pattern of LotjaGi1g1v0756600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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