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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0756700 |
| Transcript ID | LotjaGi1g1v0756700.5 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | ADP-ribosylation factor; TAIR: AT1G10630.1 ADP-ribosylation factor A1F; Swiss-Prot: sp|P51823|ARF2_ORYSJ ADP-ribosylation factor 2; TrEMBL-Plants: tr|A0A1J7HKT9|A0A1J7HKT9_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0756700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:132992999..132995049) extracted from Lotus japonicus Gifu genome v1.2.
ATGGGTCTCTCTTTCACCAAGCTGTTCAGCCGGTTGTTTGCCAAGAAGGAGATGCGTATACTTATGGTGGGTCTCGATGC TGCTGGTAAGACCACCATTCTCTACAAGCTCAAGCTCGGAGAAATTGTCACCACCATTCCCACCATTGGTATGTTTCATT TCCCTATTTTTCTTCAATTTTCATTCTTCCGATAAATCAAATGGAAATCATAATGCGGAAAACCATTCCACTTGATTAGA GTAGAGAGAAACACACCAAAGTTAAAAGCATATATAGGGATACAAATGATCCAGATTACAATAATACCCCTAAACTGTCA TGCTAACATTGCAACTTTTATTAATATGTATGATTTGGTGCAGGGTTTAATGTGGAAACTGTGGAATATAAGAACATCAG CTTCACTGTCTGGGATGTTGGAGGCCAAGACAAGGTATTTCTAATTTTCCTTGTAGCCATTATCTACTGATATCAGAGAG GAATGTTTATTAACAGTTTACCGTGCTTCCATTGATTTAAATACATGATCATTCATTGGGCTACTAATGTGTATTATCTC CATTGTTCTTGGAAAAAAATATAATTCACAATTGCCAAAAATGCTAGTTTGTACTCTGCATTGCAATACAGATGTGATTC AAAATGCATATTTTGCTTGGGGAATGGGGATGCAGGTGAATGATTGTGCAATCATGATTTTGCAAATAGTGCTGGTTAAT AGTTATACATTCCATTTGTGCTTCCATAAACCATGGTGTTTAAAATTGATATACTGCGGTAATTGTATGATCAGTAAACA AGAATGTGACTTGTCATTGTTAGAACTGTGAAAGTATTTAGGGCCTATTTGATTACATTTTTACAAAACTGTTTTAGATT TTAAAAACAAAGAAGAGAATAACCTATTTGATAGGAATTATTCTGAAATTTTCATCTTGAAATAATTCTTGATTTTTAGT TTCTAAAACGAAAATTGCAAAACATCTTGGAGATGTTGTCTGTTTTTGCTTTTAGTTTTGAAGTTTTAGAGTTTTCAACT TCGCAAAGTATATTTGTTTATTTTCTTTTGAATAATAGGACTTGGAAGTGTTTACCCAATTTGTTTTTAAATCTAAAAAA CTGGGAAGGGTACCAAACTGGCCCTCTTCACACTAAAAGCACATCAAAATCTAATTTTAAACTGAGATATGCTTGGCTTC GTGTACTGTTGTTAATCTGTTGCTCGGGTTGATTACTCTTGCCAGGCTTAGCCTATTACCAGGATGGACTGGCTTCTATT ATTGGCTTAAATCATCATAACTTTTATCAGAATTATTTGGAAATCTCAATGCAATAGTCACCATTGGTGTTTTTTTCCTA CTAGATTCGTCCTTTGTGGAGACATTACTTCCAAAATACACAAGGGCTTATTTTTGTGGTTGATAGCAATGACCGAGATC GTGCTGTTGAAGCTAGGGATGAGCTGCACAGGATGTTGAATGAGGTAGTAACATACACCCTAAATGAATGATTATGAATA ACTGGCTCACTGTAGAAACTTGTTTCTAGCTTTATTTGTTGATTGTTTTGTATGGTTGTAATCCTGTTAGGATGAGTTGA GAGATGCTGTGCTTCTAGTTTTCGCAAACAAGCAAGATCTTCCAAATGCTATGAATGCTGCTGAAATAACCGACAAGCTT GGTCTCCATTCACTTCGCCAGCGTCACTGGTAATATGAAATTTTGCTTTCAACTGTTTGCTCCTTTCTTCGATCTCCAAT CTCGCTTCTCCCACACCTATATTGTCATCTTTATATATTCTATGGATGCAGGTATATTCAGAGCACATGTGCCACCTCCG GTGAGGGACTTTATGAAGGACTCGACTGGCTCTCAAACAACATCGCAAACAAGGTCAGTGAATGATAATTATTTTGAGGT ACTTTACAATTTAAAGTACAGGGTGACAGATTTGAGGTGCAGGCTTAACTATTTTTGTTTCACTTGTATTGCAGGGATAG TGTGATTCTTGGTTTTGGGTTGCATGAAGTTCAGTTGTGCTGTAGCGATGA
CDS sequence (LotjaGi1g1v0756700.5) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGTCTCTCTTTCACCAAGCTGTTCAGCCGGTTGTTTGCCAAGAAGGAGATGCGTATACTTATGGTGGGTCTCGATGC TGCTGGTAAGACCACCATTCTCTACAAGCTCAAGCTCGGAGAAATTGTCACCACCATTCCCACCATTGGGTTTAATGTGG AAACTGTGGAATATAAGAACATCAGCTTCACTGTCTGGGATATTCGTCCTTTGTGGAGACATTACTTCCAAAATACACAA GGGCTTATTTTTGTGGTTGATAGCAATGACCGAGATCGTGCTGTTGAAGCTAGGGATGAGCTGCACAGGATGTTGAATGA GGATGAGTTGAGAGATGCTGTGCTTCTAGTTTTCGCAAACAAGCAAGATCTTCCAAATGCTATGAATGCTGCTGAAATAA CCGACAAGCTTGGTCTCCATTCACTTCGCCAGCGTCACTGGTATATTCAGAGCACATGTGCCACCTCCGGTGAGGGACTT TATGAAGGACTCGACTGGCTCTCAAACAACATCGCAAACAAGGGATAG
Protein sequence (LotjaGi1g1v0756700.5) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDIRPLWRHYFQNTQ GLIFVVDSNDRDRAVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGL YEGLDWLSNNIANKG
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SMART | 1 | 175 | 175 | 6.9E-125 | – | |
| SMART | 1 | 171 | 171 | 2.0E-19 | – | |
| PANTHER | 1 | 174 | 174 | 5.1E-143 | – | |
| PANTHER | 1 | 174 | 174 | 5.1E-143 | – | |
| Pfam | 5 | 171 | 167 | 1.2E-71 | ||
| ProSiteProfiles | 11 | 171 | 161 | 22.906 | – | |
| SUPERFAMILY | 14 | 173 | 160 | 8.41E-52 | ||
| TIGRFAM | 16 | 151 | 136 | 1.2E-16 | ||
| Gene3D | 18 | 171 | 154 | 7.5E-63 | – | |
| CDD | 18 | 170 | 153 | 4.64997E-118 | – | |
| PRINTS | 19 | 42 | 24 | 1.7E-7 | ||
| PRINTS | 113 | 134 | 22 | 1.7E-7 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | GTP binding | Interacting selectively and non-covalently with GTP, guanosine triphosphate. |
Expression pattern of LotjaGi1g1v0756700.5, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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