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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR006689
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We have found 73 results. Now displaying 1 of 2 with 50 rows per page. This search has taken 5.673s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0216229.1
n.a. ADP-ribosylation factor [Elaeis guineensis] gi|353441154|gb|AEQ94161.1| chr0 109804536 109808718 -
3 domain predictions
1 GO term
Lj0g3v0286759.1
n.a. PREDICTED: ADP-ribosylation factor-like protein 8B-like [Cicer arietinum] gi|502096772|ref|XP_004490821.1| chr0 148988615 148991154 -
3 domain predictions
1 GO term
Lj1g3v3716970.1
n.a. PREDICTED: ADP-ribosylation factor 1-like [Cicer arietinum] gi|502159221|ref|XP_004511433.1| chr1 42855769 42858694 +
3 domain predictions
1 GO term
Lj1g3v4789570.1
n.a. PREDICTED: GTP-binding protein SAR1A-like [Cicer arietinum] gi|502113098|ref|XP_004494541.1| chr1 57638719 57650350 -
3 domain predictions
1 GO term
Lj1g3v4831830.1
n.a. PREDICTED: ADP-ribosylation factor 2-like [Cicer arietinum] gi|502112805|ref|XP_004494449.1| chr1 58525536 58528004 +
3 domain predictions
1 GO term
Lj2g3v1414910.1
n.a. ADP-ribosylation factor [Elaeis guineensis] gi|353441154|gb|AEQ94161.1| chr2 22187397 22190650 -
3 domain predictions
1 GO term
Lj2g3v1414910.2
n.a. PREDICTED: ADP-ribosylation factor 1-like isoform 1 [Fragaria vesca subsp]. vesca] gi|470137765|ref|XP_004304633.1| chr2 22187961 22190650 -
3 domain predictions
1 GO term
Lj2g3v1915590.2
n.a. ADP-ribosylation factor [Medicago truncatula] gi|357482765|ref|XP_003611669.1| chr2 28287782 28291151 -
3 domain predictions
1 GO term
Lj2g3v1968450.1
n.a. ADP-RIBOSYLATION FACTOR-like protein [Medicago truncatula] gi|357482557|ref|XP_003611565.1| chr2 28717666 28720436 +
3 domain predictions
1 GO term
Lj2g3v2015200.1
n.a. PREDICTED: GTP-binding protein SAR1A-like [Cicer arietinum] gi|502113098|ref|XP_004494541.1| chr2 30723542 30725540 -
3 domain predictions
1 GO term
Lj2g3v2124880.1
n.a. PREDICTED: ADP-ribosylation factor 1-like [Cicer arietinum] gi|502159221|ref|XP_004511433.1| chr2 32039371 32042628 -
3 domain predictions
1 GO term
Lj3g3v3627870.1
n.a. PREDICTED: ADP-ribosylation factor 1-like [Cicer arietinum] gi|502144197|ref|XP_004505613.1| chr3 43752413 43756156 -
3 domain predictions
1 GO term
Lj3g3v3628900.1
n.a. PREDICTED: ADP-ribosylation factor 1-like [Cicer arietinum] gi|502144197|ref|XP_004505613.1| chr3 43785939 43787231 -
3 domain predictions
1 GO term
Lj4g3v0961090.1
n.a. PREDICTED: probable ADP-ribosylation factor At2g18390-like [Glycine max] gi|356496769|ref|XP_003517238.1| chr4 13995914 13998999 -
3 domain predictions
1 GO term
Lj4g3v2268760.1
n.a. PREDICTED: GTP-binding protein SAR1A-like [Solanum lycopersicum] gi|460367072|ref|XP_004229399.1| chr4 31698259 31700137 +
3 domain predictions
1 GO term
Lj5g3v1208000.1
n.a. PREDICTED: ADP-ribosylation factor-like protein 5-like [Glycine max] gi|356576553|ref|XP_003556395.1| chr5 19616743 19618938 +
3 domain predictions
1 GO term
Lj5g3v1514640.1
n.a. PREDICTED: GTP-binding protein SAR1A-like [Cicer arietinum] gi|502113098|ref|XP_004494541.1| chr5 22078888 22080535 -
3 domain predictions
1 GO term
Lj5g3v1552090.1
n.a. ADP ribosylation factor [Jatropha curcas] gi|219957610|gb|ACL67836.1| chr5 22804656 22809449 +
3 domain predictions
1 GO term
Lj6g3v1559290.1
n.a. GTP-binding protein SAR1A [Medicago truncatula] gi|357449027|ref|XP_003594789.1| chr6 17765329 17767790 -
3 domain predictions
1 GO term
Lj6g3v1882460.1
n.a. PREDICTED: ADP-ribosylation factor-related protein 1-like [Glycine max] gi|356549001|ref|XP_003542887.1| chr6 20803694 20806317 -
3 domain predictions
1 GO term
LotjaGi1g1v0094800.1
n.a. ADP-ribosylation factor, putative; TAIR: AT5G37680.1 ADP-ribosylation factor-like A1A; Swiss-Prot: sp|Q8W4C8|ARL8C_ARATH ADP-ribosylation factor-like protein 8c; TrEMBL-Plants: tr|I3T1K5|I3T1K5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0094800 LjG1.1_chr1 14355863 14359395 +
3 domain predictions
1 GO term
LotjaGi1g1v0416800.1
n.a. ADP-ribosylation factor family protein; TAIR: AT2G18390.1 ADP-ribosylation factor family protein; Swiss-Prot: sp|Q9ZPX1|ARF5_ARATH ADP-ribosylation factor-like protein 2; TrEMBL-Plants: tr|A0A0L9URD7|A0A0L9URD7_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0416800 LjG1.1_chr1 91009453 91016219 -
3 domain predictions
1 GO term
LotjaGi1g1v0748000.1
n.a. ADP-ribosylation factor family protein; TAIR: AT4G02080.1 secretion-associated RAS super family 2; Swiss-Prot: sp|O04834|SAR1A_ARATH GTP-binding protein SAR1A; TrEMBL-Plants: tr|I3T3W2|I3T3W2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0748000 LjG1.1_chr1 132059090 132062365 -
3 domain predictions
1 GO term
LotjaGi1g1v0748000.2
n.a. ADP-ribosylation factor family protein; TAIR: AT4G02080.1 secretion-associated RAS super family 2; Swiss-Prot: sp|O04834|SAR1A_ARATH GTP-binding protein SAR1A; TrEMBL-Plants: tr|I3T3W2|I3T3W2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0748000 LjG1.1_chr1 132060259 132062216 -
3 domain predictions
1 GO term
LotjaGi1g1v0748000.3
n.a. ADP-ribosylation factor family protein; TAIR: AT4G02080.1 secretion-associated RAS super family 2; Swiss-Prot: sp|O04834|SAR1A_ARATH GTP-binding protein SAR1A; TrEMBL-Plants: tr|I3T3W2|I3T3W2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0748000 LjG1.1_chr1 132060496 132062068 -
3 domain predictions
1 GO term
LotjaGi1g1v0756700.1
n.a. ADP-ribosylation factor; TAIR: AT1G10630.1 ADP-ribosylation factor A1F; Swiss-Prot: sp|P51823|ARF2_ORYSJ ADP-ribosylation factor 2; TrEMBL-Plants: tr|A0A1J7HKT9|A0A1J7HKT9_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0756700 LjG1.1_chr1 132992607 132995466 +
3 domain predictions
1 GO term
LotjaGi1g1v0756700.2
n.a. ADP-ribosylation factor; TAIR: AT1G10630.1 ADP-ribosylation factor A1F; Swiss-Prot: sp|P51823|ARF2_ORYSJ ADP-ribosylation factor 2; TrEMBL-Plants: tr|A0A1J7HKT9|A0A1J7HKT9_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0756700 LjG1.1_chr1 132992691 132995752 +
3 domain predictions
1 GO term
LotjaGi1g1v0756700.3
n.a. ADP-ribosylation factor; TAIR: AT5G14670.1 ADP-ribosylation factor A1B; Swiss-Prot: sp|P51823|ARF2_ORYSJ ADP-ribosylation factor 2; TrEMBL-Plants: tr|A0A0B2NT44|A0A0B2NT44_GLYSO ADP-ribosylation factor 2; Found in the gene: LotjaGi1g1v0756700 LjG1.1_chr1 132992999 132994915 +
3 domain predictions
1 GO term
LotjaGi1g1v0756700.4
n.a. ADP-ribosylation factor; TAIR: AT1G10630.1 ADP-ribosylation factor A1F; Swiss-Prot: sp|P51823|ARF2_ORYSJ ADP-ribosylation factor 2; TrEMBL-Plants: tr|A0A1J7HKT9|A0A1J7HKT9_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0756700 LjG1.1_chr1 132992999 132994998 +
3 domain predictions
1 GO term
LotjaGi1g1v0756700.5
n.a. ADP-ribosylation factor; TAIR: AT1G10630.1 ADP-ribosylation factor A1F; Swiss-Prot: sp|P51823|ARF2_ORYSJ ADP-ribosylation factor 2; TrEMBL-Plants: tr|A0A1J7HKT9|A0A1J7HKT9_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0756700 LjG1.1_chr1 132992999 132995049 +
3 domain predictions
1 GO term
LotjaGi2g1v0244300.1
n.a. ADP-ribosylation factor; TAIR: AT1G10630.1 ADP-ribosylation factor A1F; Swiss-Prot: sp|Q06396|ARF1_ORYSJ ADP-ribosylation factor 1; TrEMBL-Plants: tr|A0A0D3EVD4|A0A0D3EVD4_9ORYZ Uncharacterized protein; Found in the gene: LotjaGi2g1v0244300 LjG1.1_chr2 70816521 70820758 +
3 domain predictions
1 GO term
LotjaGi2g1v0244300.2
n.a. ADP-ribosylation factor; TAIR: AT1G10630.1 ADP-ribosylation factor A1F; Swiss-Prot: sp|Q06396|ARF1_ORYSJ ADP-ribosylation factor 1; TrEMBL-Plants: tr|A0A0D3EVD4|A0A0D3EVD4_9ORYZ Uncharacterized protein; Found in the gene: LotjaGi2g1v0244300 LjG1.1_chr2 70816909 70819819 +
3 domain predictions
1 GO term
LotjaGi2g1v0244300.3
n.a. ADP-ribosylation factor; TAIR: AT1G10630.1 ADP-ribosylation factor A1F; Swiss-Prot: sp|Q06396|ARF1_ORYSJ ADP-ribosylation factor 1; TrEMBL-Plants: tr|A0A0D3EVD4|A0A0D3EVD4_9ORYZ Uncharacterized protein; Found in the gene: LotjaGi2g1v0244300 LjG1.1_chr2 70816909 70819822 +
3 domain predictions
1 GO term
LotjaGi2g1v0321000.1
n.a. ADP-ribosylation factor; TAIR: AT1G10630.1 ADP-ribosylation factor A1F; Swiss-Prot: sp|P51823|ARF2_ORYSJ ADP-ribosylation factor 2; TrEMBL-Plants: tr|A0A1D5T082|A0A1D5T082_WHEAT Uncharacterized protein; Found in the gene: LotjaGi2g1v0321000 LjG1.1_chr2 79587295 79596071 -
3 domain predictions
1 GO term
LotjaGi2g1v0321000.2
n.a. ADP-ribosylation factor; TAIR: AT1G10630.1 ADP-ribosylation factor A1F; Swiss-Prot: sp|P51823|ARF2_ORYSJ ADP-ribosylation factor 2; TrEMBL-Plants: tr|A0A182BFF6|A0A182BFF6_LUPAN Putative adp-ribosylation factor 2; Found in the gene: LotjaGi2g1v0321000 LjG1.1_chr2 79593005 79595429 -
3 domain predictions
1 GO term
LotjaGi2g1v0321000.3
n.a. ADP-ribosylation factor, putative, expressed; TAIR: AT5G14670.2 ADP-ribosylation factor A1B; Swiss-Prot: sp|O48920|ARF_VIGUN ADP-ribosylation factor; TrEMBL-Plants: tr|A0A1D5RXU1|A0A1D5RXU1_WHEAT Uncharacterized protein; Found in the gene: LotjaGi2g1v0321000 LjG1.1_chr2 79593005 79595429 -
3 domain predictions
1 GO term
LotjaGi2g1v0321000.4
n.a. ADP-ribosylation factor; TAIR: AT1G10630.1 ADP-ribosylation factor A1F; Swiss-Prot: sp|P51823|ARF2_ORYSJ ADP-ribosylation factor 2; TrEMBL-Plants: tr|A0A1D5T082|A0A1D5T082_WHEAT Uncharacterized protein; Found in the gene: LotjaGi2g1v0321000 LjG1.1_chr2 79593016 79595429 -
3 domain predictions
1 GO term
LotjaGi2g1v0321000.5
n.a. ADP-ribosylation factor; TAIR: AT1G10630.1 ADP-ribosylation factor A1F; Swiss-Prot: sp|P51823|ARF2_ORYSJ ADP-ribosylation factor 2; TrEMBL-Plants: tr|A0A1D5T082|A0A1D5T082_WHEAT Uncharacterized protein; Found in the gene: LotjaGi2g1v0321000 LjG1.1_chr2 79593064 79595429 -
3 domain predictions
1 GO term
LotjaGi2g1v0321000.6
n.a. ADP ribosylation factor; TAIR: AT5G14670.1 ADP-ribosylation factor A1B; Swiss-Prot: sp|P51823|ARF2_ORYSJ ADP-ribosylation factor 2; TrEMBL-Plants: tr|A0A1J7G0C8|A0A1J7G0C8_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0321000 LjG1.1_chr2 79593258 79595429 -
3 domain predictions
1 GO term
LotjaGi2g1v0405000.2
n.a. ADP-ribosylation factor family protein; TAIR: AT3G62290.1 ADP-ribosylation factor A1E; Swiss-Prot: sp|P51823|ARF2_ORYSJ ADP-ribosylation factor 2; TrEMBL-Plants: tr|I3T7N3|I3T7N3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0405000 LjG1.1_chr2 90186146 90188322 -
3 domain predictions
1 GO term
LotjaGi2g1v0410200.1
n.a. ADP-ribosylation factor, putative; TAIR: AT3G49870.1 ADP-ribosylation factor-like A1C; Swiss-Prot: sp|Q8VY57|ARL8A_ARATH ADP-ribosylation factor-like protein 8a; TrEMBL-Plants: tr|I3S107|I3S107_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0410200 LjG1.1_chr2 90704443 90708109 +
3 domain predictions
1 GO term
LotjaGi2g1v0410200.2
n.a. ADP-ribosylation factor, putative; TAIR: AT3G49870.1 ADP-ribosylation factor-like A1C; Swiss-Prot: sp|Q8VY57|ARL8A_ARATH ADP-ribosylation factor-like protein 8a; TrEMBL-Plants: tr|I3S107|I3S107_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0410200 LjG1.1_chr2 90705312 90707270 +
3 domain predictions
1 GO term
LotjaGi2g1v0410200.3
n.a. ADP-ribosylation factor, putative; TAIR: AT3G49870.1 ADP-ribosylation factor-like A1C; Swiss-Prot: sp|Q8VY57|ARL8A_ARATH ADP-ribosylation factor-like protein 8a; TrEMBL-Plants: tr|I3S107|I3S107_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0410200 LjG1.1_chr2 90705638 90707270 +
3 domain predictions
1 GO term
LotjaGi2g1v0448800.1
n.a. ADP-ribosylation factor; TAIR: AT5G17060.1 ADP-ribosylation factor B1B; Swiss-Prot: sp|P91924|ARF_DUGJA ADP-ribosylation factor; TrEMBL-Plants: tr|I3T232|I3T232_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0448800 LjG1.1_chr2 94247686 94251389 -
3 domain predictions
1 GO term
LotjaGi2g1v0448800.2
n.a. ADP-ribosylation factor; TAIR: AT5G17060.1 ADP-ribosylation factor B1B; Swiss-Prot: sp|P91924|ARF_DUGJA ADP-ribosylation factor; TrEMBL-Plants: tr|I3T232|I3T232_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0448800 LjG1.1_chr2 94248395 94251001 -
3 domain predictions
1 GO term
LotjaGi2g1v0448800.3
n.a. ADP-ribosylation factor; TAIR: AT5G17060.1 ADP-ribosylation factor B1B; Swiss-Prot: sp|P91924|ARF_DUGJA ADP-ribosylation factor; TrEMBL-Plants: tr|I3T232|I3T232_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0448800 LjG1.1_chr2 94248395 94251195 -
3 domain predictions
1 GO term
LotjaGi3g1v0318600.1
n.a. ADP-ribosylation factor family protein; TAIR: AT2G18390.1 ADP-ribosylation factor family protein; Swiss-Prot: sp|Q9ZPX1|ARF5_ARATH ADP-ribosylation factor-like protein 2; TrEMBL-Plants: tr|A0A151TIG1|A0A151TIG1_CAJCA Putative ADP-ribosylation factor family; Found in the gene: LotjaGi3g1v0318600 LjG1.1_chr3 67414759 67420726 +
2 domain predictions
1 GO term
LotjaGi3g1v0318600.2
n.a. ADP-ribosylation factor family protein; TAIR: AT2G18390.1 ADP-ribosylation factor family protein; Swiss-Prot: sp|Q9ZPX1|ARF5_ARATH ADP-ribosylation factor-like protein 2; TrEMBL-Plants: tr|M5W6X0|M5W6X0_PRUPE Uncharacterized protein; Found in the gene: LotjaGi3g1v0318600 LjG1.1_chr3 67415124 67420696 +
3 domain predictions
1 GO term
LotjaGi3g1v0538400.1
n.a. ADP-ribosylation factor; TAIR: AT3G03120.1 ADP-ribosylation factor B1C; Swiss-Prot: sp|P91924|ARF_DUGJA ADP-ribosylation factor; TrEMBL-Plants: tr|I3SEX0|I3SEX0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0538400 LjG1.1_chr3 95480111 95483922 -
3 domain predictions
1 GO term
LotjaGi3g1v0538400.2
n.a. ADP-ribosylation factor; TAIR: AT3G03120.1 ADP-ribosylation factor B1C; Swiss-Prot: sp|P91924|ARF_DUGJA ADP-ribosylation factor; TrEMBL-Plants: tr|I3SEX0|I3SEX0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0538400 LjG1.1_chr3 95480938 95483450 -
3 domain predictions
1 GO term