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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0757400 |
| Transcript ID | LotjaGi1g1v0757400.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Long-Chain Acyl-CoA Synthetase; TAIR: AT2G47240.1 AMP-dependent synthetase and ligase family protein; Swiss-Prot: sp|O22898|LACS1_ARATH Long chain acyl-CoA synthetase 1; TrEMBL-Plants: tr|I1JQU3|I1JQU3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0757400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:133054494..133060945) extracted from Lotus japonicus Gifu genome v1.2.
CTTTTATCAAACCAAACAGCATCCAAAGAAAAAAAAAACACTTTGTTCATCCCTTTCGACATGGAACCATGAACGTAATA AATGGAATTCATGATACAAGAGGTTTCGCTGATTCTTCTTCAACTACCCCACCAATTTACAGCTCCAATCATTTTCCTAT AAAACTCTCTCAACATTGTTCTTAGGCCTTCATTCCAATTGCAATTGCATATTTGCATGTGTCACTTCCAAGTGAGAGGT AAATTGGATTTTATCTTTTTCTTTTGTAAATTGCAATACCATCACTTTGCGTTTTCTGTGGGCTAGTTTCATTTTTTAGA TACAGTAGAGACGTTGATTATATGAATTGATTATAATAAAGTGTGCCTTGAATTTTCCTTTGTTTGATAAAAACTACTCT GTCATTCTCCTTCATGTTCCTTGGTGCTTGGAACCCGGTTTTCACTTTCCAGAACTTGCTTTTTAATATTGCATGTATAT CTATATGCTTGGTAGTTACTAGTTGGTACTAATCCACATATATGTTACTACGTCATGCTTTGTTTTTGTCACATTAAAAC ATAGCATACATTTTTTAACCAACTTTCGAAATTGGAATCACTTCCACTTCACAAATAGGGACTCGGTTGAAGGACAATAA CTTGATCAAGTCGGTGTTCTTCTTTTGCTTCTCAAGAGTTCTTGTTGGCTTATGCTTGTTTTGTTCAAGTTCCATAGTGT GTTGATAAAGGAGAATGAAGAGTTTTGCAGCAAAGGTTGAGGAAGGAATAGAAGGTACAAATGGCAAACCAACCGTTGGT CCAGTATATAGAAACCTCCTCTCCAAAAATGATTTTCCTCCACCGGATCCTGAATTAAATAGCGCTTGGGATATTTTCAG GTAAATTCATGCAAAGTTTGAGAATGAAAGCAAATATATTATTGAGACCTTGGATACAAGCTTATTAGAGTTTATTCGAG CTTATCTACTAGAAAATGCATTAAATTAGCTTCAATAAGTGCTCTTTGGTTTTCATCCAAACGGGTACATAGTCCATAAT AAACTTCATCCATATAATGTGATGGAGTTAATCAAATATCAGTATGATGATAGATAGAAGTTTAGTGTTTGATAAATGAA AGATAATGAGTATTTAGGGAACTTTGATATCATTGCTTTGATGATTGCAGTGTGTCTGTTAAAAAATATCCTCAAAACCG TATGCTGGGATGGCGTGAATTTGTTGATGGAAAGGTATGTTATGGAAATTCATTTTATTTTGTGAGCATGTCAACAAGAC AAGGAAATTGATTTTTGTTCATGGTATATAGTTTGGACCATATGTCTGGAAGACATATAAGGAAGTCTATGATGAAGTTC TGCATATTGGTTCAGCTTTAAGAGCATGTGGTGCTGAACCTGTAAGTGCTTGCAATGGGACATCTTTTGTCATTTTTAAG TACGGTACACTGGTATTCTTTAAAGGAAAACTTCTTAGTTCTTAATGTTTTGTTGGTGTGGTCCTATCATAGGGCTCTCG AATTGGAGTTTATGGATCAAACTGCCCTCAGTGGATTGTGGCAATGGAGGTTTACCTTTACACTTTGAGTTAATCTGAAG TTTTCGCCATTGATCCTTACATAATCCTATCACAATTCATAAATATTTTTATATTGATGTAGGCTTGTTGCGCGCACAGC CTGGTTTGTGTACCTCTCTATGACACCCTTGGTATGTTTTTTTCCCACAAATTTACTCATCCCCTGTTTTCTCTGTTTTT CTGCAATTAGAAGTTGAACCTGAACCTACAAATGATCCTAGTAACCAAGTGCCATCTTTTGGATTTTGTTCCTTTTTATT TCTATCAGTAACCATAGCTGATTTTTTTTCCCGGATTTGGTGTGAATTTTTAAGAGTACAATAGTTATTGGATCTTAATA AAGCAACATTAGGATTTTAAGGCTTTTTTTGCTGGTTCTTGCTTGTTTGTGTTTCTCATTCATTTTCATTATTTACCAGA AACTGGTCTGTTTTGAATTTACTTATTTATATCCTAGATTATTCTTCATATATTGTTGATTTGAAGCATTTCAAACGCCA ATTGCAGGGGCTGGTGCTGTAAATTTTATCGTCGATCACGCAGAAGTAGATTTTGTGTTTGTCCAGGATAAGAAGGTTAT GCAAGTAAGAATCACTTTCTTGATATGAATCGTTTTAAGCTCCAGATGAATTCATATATCAGATATTCAGAAGTAAATAG AGGTTCTGATTTTACATATAATGTTTTCAGCTTTTGAATCCTGATTGCAAATCTGTTCAACGACTGAAAGGTAAAGTTAT GGCTACTGGCGCTTGTTGAGCTTAGCCGTGATGCAACTTAATAGGAAACATTTAACTGAGTTTGGTTGTGGATACAGCGA TGGTGTGCTTCACTTCAATAACAAATGAAGAGAAAGATAAGGCTAACAGCATTGGAATTAAGCTATATTCATGGAAAGAG TTCTTGTACACGGTTAGTCTGTAAAGAAATTTTCATCATACTACACATGTCTAATACAGAAAGAAGAACTACTCTTTTCC ATAATAGTATAGAAATATATATGCACCAGTAGGTTTGTTCACTTTCTGCGCCGACTTTTTTAAAATGGTTGTTGAAACTT GTTTGTATTAATGGTGTTATGTACTTATGTACTGCATCCTAACATTTTCAGAAACCTTTTTAAGAATACATCATAACAGT TTACTACTATGCAGGGACAAGAAAAACCATCAACCATTTCACCACCTCAGGCTTATAATATCTGCACAATAATGTATACA AGTGGAACCACTGGAACCCCAAAGGGTGTTGTTTTGACGCATGAAAACATAACTTCTTTTGTAAGGGGAATGGATCTTTT CATGGAACAATTTGAAGAAAAGGTAAATCTGGTACTTGATCCACTGGAAAAGTTGTGATACTATTTTTCCTTCACTCCAT AAGTATGAATCAACTACTAAAGAAACTTTTAGACAAAAAATTGTGTGAAAATTCTTCTAATACCAACCCCCAACTATGTA GTTTTCTGCGTGAAACTTAATAATATGGATGGATCAACTTCACCCTTAGGTTGTTTGTATGAGAAAATACTCATGACTCT CATGGTGTTTAGTGATATACTTTTTCTGACATGTGTATCTTACTTTGCATAGATGACTGTAGAGGATGTGTATTTATCCT TCCTCCCATTGGCTCATATCCTTGATCGCACAATTGAGGAGTACTTTTTCCATAAAGGTGCATCTGTTGGCTACTACCAT GGGGTATGTTCATGCAGGAATATTTTAATGATTTGGATTTACTTGATTATTTTATATGAGTGGAAAAGACAAGAAGGAGA AGATGCTAACAATAGGGTCATATAAGTTGTTCAGTTTTCCTTTGTCACTCACAATGTGTGTATGTGTGAGTGAGAGAGAG AGAGAGAGAGAGAGAGAGAGGCAGTGACTTACATGTTTGGACCAGTAGACAATGTAGTAAGAAAAATGCTAGCAACACAA TCTTGAATACATTTTGTAAGATTGGTTTATTTTTTAAAAAGATAATACAGTTGCCTTTTATATTGATCATTAAGTATAGT CATCAGGATTATATTTCTCCATGAGATTTTTCATCTATATGTGAAATCAGAATTGAATAATTTACCTAGGTAAGAAGTAA TTCATTCACTACTAAATCTTATGAATTTCCGGAATCTCTAACATGAAGGATACAACTGCATTGAGGGATGATTTGATGGA ATTGAAGCCAACATTGTTTGCTGGGGTCCCTCGGGTCTTTGAAAAGATCTATGAAGGCAAGTTCACACACTCCAGAAAAT TTATATCAATTCAGTATCAAACTTATTCAAGATCATCTATTTCAGGTATCAAGAAAGCAGTGGAAGAACTCAATCCATTG AGGAGAACAGTTTTTGGCTTGCTCTACAAATAGTAAGTTGGTATTCTATAACTATAATTTTGAATAAAATTTGGTATAGG TAAAATTTCCTTTATGTGGTGTTTTTTCTAAACTTCATCTATATTTTGATACAGTAAACTTGGTTGGATGAACAAAGGAT ATAAACAGTGTAATTCATCACCGTTAGCAGATCTATTAGCCTTCAGAAAGGTTATACTTGGATCTCCTCTTTACTAAAAA TACTATTGTCTCTCCTGCTCTGCTTCTACAGAAGGCCAACTTCCCAATGCTTGCCATCTATCTATCTAAAAAATTGACAC ACTTCTTATGTGGTGAACTTTCTCTAAATCTCCACTCTTCTCCTTCCCCCTTGTCCTGTGAATCAGGTAAAAGCTCGGCT AGGTGGGCGTATTAGACTTATAATAACTGGAGGTGCACCCTTGAGCTCTGAGGTAGAAGAATTTTTGCGTGTTACTTCTT GTGCCTTTGTATGTCAAGGCTATGGTAAGGAAGTCTCTTTGTTATGCGGTTAGGATTCTCTATTGTCACATATTGAATTT AGATTCGCAGGAAATCCTAAATTCACACAGTCATGGAACATGAGCCAATCGATTAAGACCAGACGACTCAGATTTTAAAC TGATTGTTACAGTCCGATCTTTGATAAAGGATGAGCGGTTCGATATTTGATAGTATAATTCAGATTCTTTGACTATGTAA ATTTAGGACTTCTCTGACTGCAATTTGCAGGGAACCCAAACCTGTCACATGTCAAGTGAAACTTTGTGTCTATCTCTTTC TTTCTGTATAAATATTCAAAGGGTCCTACCTATTTACTTCATATGGACAGATAGACAAACAAAAAAAATTAACTTGATAT TATCATTTGAACTTTCATAAGAGGTTCCTGATCACTTGTTATTATGCTGCATATAAGTAGGATAGAACAATACTGTTAGG ACTTGGGACACAACATTCTATACAATGAAACACTTTAACACTGATTATTAATCCAGGCTTGACTGAAACTTGTGGCTCCA CAACTCTTGCCTTTCCTGATGAAATGTGCATGTTGGGTACTGTTGGTCCTGTATCTGTATACAATGAATTGCAGCTCGAG GAGGTTCCAGAGATGGGCTACAATCCTCTTGGAAGTCCTCCAAGTGGTGAGATATGTCTGAGAGGGAAAAGTGTGTTCAC TGGATACTACAAAGACCCTGAGTTAACAAGGGAAGCCATAAGAGATGGATGGTTTCACACAGGTTTAAACTTGAACTGTT ATTTCCAGCGTCAAAAACTGAACTTCTGTTTTGAACATTTATAACATGTTATAATCTGACTATTCCATTGCTTGGTAATG TATCCTCAGGGGACATTGGAGAAATGCAACCTAATGGTGTTGTTAAGATTATTGATAGGAAGAAGAATCTTATAAAACTT TCTCAAGGAGAGTATGTCGCTCTTGAACATTTGGAAAATGTATATGGAATCACTCCAATAGTAGAAGATGTAAGCATCTT CATGGTTTCAGTACTGTTAACATGTTCAATTTTCAATCCTTAGTTTCTAATAGGTTTGTGATTATTTGTGTTTTTCTGGA AGATATGGGTTTATGGAAATAGCTTCAAATCATCACTAGTTGCAGTGGTAGTTCCAAATGAAGAAATCACCAAGAAGTGG GCTTATTCAAATGGTCACATGGCTTCTTTCACTCAACTATGTTCTCTTGATCAATTGAAGAAACAAGTGCTATTTGAACT CAAGCTGACCGCAGAGAGAAATAAGGTAACATCTATGGATATTGTATAGATCAACAATTGCATCATTCTTTATTATTATT TCTTCAAGACTATATATTCTATATCAGGTTTTAGGTGCTTCAATAATACATTTTTAACTTTTGAACTTGTCTCTTTCAAC ACATTAGCTGAAGGGATTTGAACATATCAAAGGGGTGATACTAGAGCCACATCCATTAGACATGGAAAGAGATTTGGTGA CTGCAACAATGAAGAAGAGAAGAAATAATATGCTCAAATATTATAAGGTAAGTCAATATCCTTTTCTCACTCTTCCTTAC TCTCTTAGTATTTAATCTTGTTGAAGTACTTACACATGTTTCAATTTCTGAAATTTTTTTGACTTTATAACAGGTTGAAA TAGATGAAGTATACCGAAGTTTGGGTGAAGATAAATATAAGCTTTAAGGCTTCACCAGGGATGAGGCAGTGCAATAAAAT AACTATTTTGTACCAATTGTTCCCAACCCCAAACTCCCACCTATCACGTATGTAATGTTGTTCTTGTTGCCAGTTTATGA TGTAATGTGTGTGTATTATCAATTATGCCAATAACAATAAGCAACGCAGATTCATTGGAAATATAAAAGGAAATTCATCT CTCACTCATTCTAACCCATTTTATAACTGATCAGCTGCACTTATTGTTGAGCCTTCACACAAAGATGAAAGAAAAACAAA TCTTCTAAGATTGATATGGTGAGGTCGAAGGTAGAGTAACTTAGTAAACCGT
CDS sequence (LotjaGi1g1v0757400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAGAGTTTTGCAGCAAAGGTTGAGGAAGGAATAGAAGGTACAAATGGCAAACCAACCGTTGGTCCAGTATATAGAAA CCTCCTCTCCAAAAATGATTTTCCTCCACCGGATCCTGAATTAAATAGCGCTTGGGATATTTTCAGTGTGTCTGTTAAAA AATATCCTCAAAACCGTATGCTGGGATGGCGTGAATTTGTTGATGGAAAGTTTGGACCATATGTCTGGAAGACATATAAG GAAGTCTATGATGAAGTTCTGCATATTGGTTCAGCTTTAAGAGCATGTGGTGCTGAACCTGGCTCTCGAATTGGAGTTTA TGGATCAAACTGCCCTCAGTGGATTGTGGCAATGGAGGCTTGTTGCGCGCACAGCCTGGTTTGTGTACCTCTCTATGACA CCCTTGGGGCTGGTGCTGTAAATTTTATCGTCGATCACGCAGAAGTAGATTTTGTGTTTGTCCAGGATAAGAAGGTTATG CAACTTTTGAATCCTGATTGCAAATCTGTTCAACGACTGAAAGCGATGGTGTGCTTCACTTCAATAACAAATGAAGAGAA AGATAAGGCTAACAGCATTGGAATTAAGCTATATTCATGGAAAGAGTTCTTGTACACGGGACAAGAAAAACCATCAACCA TTTCACCACCTCAGGCTTATAATATCTGCACAATAATGTATACAAGTGGAACCACTGGAACCCCAAAGGGTGTTGTTTTG ACGCATGAAAACATAACTTCTTTTGTAAGGGGAATGGATCTTTTCATGGAACAATTTGAAGAAAAGATGACTGTAGAGGA TGTGTATTTATCCTTCCTCCCATTGGCTCATATCCTTGATCGCACAATTGAGGAGTACTTTTTCCATAAAGGTGCATCTG TTGGCTACTACCATGGGGATACAACTGCATTGAGGGATGATTTGATGGAATTGAAGCCAACATTGTTTGCTGGGGTCCCT CGGGTCTTTGAAAAGATCTATGAAGGTATCAAGAAAGCAGTGGAAGAACTCAATCCATTGAGGAGAACAGTTTTTGGCTT GCTCTACAAATATAAACTTGGTTGGATGAACAAAGGATATAAACAGTGTAATTCATCACCGTTAGCAGATCTATTAGCCT TCAGAAAGGTAAAAGCTCGGCTAGGTGGGCGTATTAGACTTATAATAACTGGAGGTGCACCCTTGAGCTCTGAGGTAGAA GAATTTTTGCGTGTTACTTCTTGTGCCTTTGTATGTCAAGGCTATGGCTTGACTGAAACTTGTGGCTCCACAACTCTTGC CTTTCCTGATGAAATGTGCATGTTGGGTACTGTTGGTCCTGTATCTGTATACAATGAATTGCAGCTCGAGGAGGTTCCAG AGATGGGCTACAATCCTCTTGGAAGTCCTCCAAGTGGTGAGATATGTCTGAGAGGGAAAAGTGTGTTCACTGGATACTAC AAAGACCCTGAGTTAACAAGGGAAGCCATAAGAGATGGATGGTTTCACACAGGGGACATTGGAGAAATGCAACCTAATGG TGTTGTTAAGATTATTGATAGGAAGAAGAATCTTATAAAACTTTCTCAAGGAGAGTATGTCGCTCTTGAACATTTGGAAA ATGTATATGGAATCACTCCAATAGTAGAAGATATATGGGTTTATGGAAATAGCTTCAAATCATCACTAGTTGCAGTGGTA GTTCCAAATGAAGAAATCACCAAGAAGTGGGCTTATTCAAATGGTCACATGGCTTCTTTCACTCAACTATGTTCTCTTGA TCAATTGAAGAAACAAGTGCTATTTGAACTCAAGCTGACCGCAGAGAGAAATAAGCTGAAGGGATTTGAACATATCAAAG GGGTGATACTAGAGCCACATCCATTAGACATGGAAAGAGATTTGGTGACTGCAACAATGAAGAAGAGAAGAAATAATATG CTCAAATATTATAAGGTTGAAATAGATGAAGTATACCGAAGTTTGGGTGAAGATAAATATAAGCTTTAA
Protein sequence (LotjaGi1g1v0757400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKSFAAKVEEGIEGTNGKPTVGPVYRNLLSKNDFPPPDPELNSAWDIFSVSVKKYPQNRMLGWREFVDGKFGPYVWKTYK EVYDEVLHIGSALRACGAEPGSRIGVYGSNCPQWIVAMEACCAHSLVCVPLYDTLGAGAVNFIVDHAEVDFVFVQDKKVM QLLNPDCKSVQRLKAMVCFTSITNEEKDKANSIGIKLYSWKEFLYTGQEKPSTISPPQAYNICTIMYTSGTTGTPKGVVL THENITSFVRGMDLFMEQFEEKMTVEDVYLSFLPLAHILDRTIEEYFFHKGASVGYYHGDTTALRDDLMELKPTLFAGVP RVFEKIYEGIKKAVEELNPLRRTVFGLLYKYKLGWMNKGYKQCNSSPLADLLAFRKVKARLGGRIRLIITGGAPLSSEVE EFLRVTSCAFVCQGYGLTETCGSTTLAFPDEMCMLGTVGPVSVYNELQLEEVPEMGYNPLGSPPSGEICLRGKSVFTGYY KDPELTREAIRDGWFHTGDIGEMQPNGVVKIIDRKKNLIKLSQGEYVALEHLENVYGITPIVEDIWVYGNSFKSSLVAVV VPNEEITKKWAYSNGHMASFTQLCSLDQLKKQVLFELKLTAERNKLKGFEHIKGVILEPHPLDMERDLVTATMKKRRNNM LKYYKVEIDEVYRSLGEDKYKL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 2 | 659 | 658 | 0.0 | – | |
| PANTHER | 2 | 659 | 658 | 0.0 | – | |
| SUPERFAMILY | 35 | 653 | 619 | 7.33E-111 | – | |
| Gene3D | 38 | 348 | 311 | 7.5E-47 | ||
| Pfam | 63 | 522 | 460 | 2.1E-105 | ||
| CDD | 72 | 653 | 582 | 0.0 | – | |
| ProSitePatterns | 225 | 236 | 12 | - | ||
| Gene3D | 364 | 514 | 151 | 9.3E-35 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. |
Expression pattern of LotjaGi1g1v0757400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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