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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0761700 |
| Transcript ID | LotjaGi1g1v0761700.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Cellulose synthase-like protein; TAIR: AT1G02730.1 cellulose synthase-like D5; Swiss-Prot: sp|Q9SRW9|CSLD5_ARATH Cellulose synthase-like protein D5; TrEMBL-Plants: tr|V7D0X9|V7D0X9_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0761700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:133456782..133460988) extracted from Lotus japonicus Gifu genome v1.2.
ACTCACTTCACTCTCTCTTTCATTCTTCACTTCGTTTCCTTATAGGCAATTCAAAATATTGAACATTCTTTACTAATCTC TACTTTCTCTCTCACTTTCTTTTCTCATCATGGTGAAAATGGCAACATCTCCGTCTTCTTCTCCGGTCACCATAACGGTC TCATCCGGCGGAAAAACAGGGGGAAGCAGAAGCATGGGACTAACAAGTCCGGTACCCCGTGCTTCATTCTCCAACAACCC CAATTCCCCTCTCAGCGCCGCCAGATCAAGCAGAGCTTCCACCGGCGGCGGCGGAATCAGGCGGCTATCAGGTGGAGCCA CCACTACCACCACCACCACCACCACAGACAACAGCAACGGAGAAATCAACCCAGAATTCGTGTCATACACTGTTCATATT CCTCCAACACCAGATCGCAGCGTGCCCTTGTCAACCTCACAGACAAGCCTCCCTGAAGATTGCAAAAACCCTACAAGCTA CCTCTCCGGTACGATTTTCACCGGAGGGTTCAACTCCGTGACACGAGGCCATGTAATTGATTGCTCCGAGGTGGAAATCG ACAAGCCGCCGCTGAAATCTGGGTTGATTTGTGGGATGAAGGGTTGTGATGAGAAAGCAATGCAAATTAGGGGGAGTGGT CCTTGTGAGTGTGGCTTCAAGATCTGCAAGGATTGTTACATTGAGTGCGGCGGAAACCATGGAGCGGGTCGGTGCCCTGG TTGCAAAGAGCCTTACCACAAGGATGTGAGTGAGAGTGAAGAAGAAGAAGAGGAGGAAGAGGAATCTGAGGGTGAAGATC AAGCTCTGCCGTTACCTTCCATGGCGGAATTCAAATTGGATAAGAGGCTTTCCCTTGTGAAGTCCTTCAAAGCACAGAAT CATCCACCTGAATTTGATCACACTCGCTGGCTGTTTGAAACCAAAGGAACCTATGGTTATGGAAATGCTGTGTGGCCTAA AGATGGATATGGTGGTAGCAATGGATACGAACCCCCGCCGGATTTCGGAGAGAGAGCTAGGAGACCCTTGACTCGTAAGG TTGCAGTTTCAGCTGCCATTCTCAGTCCATATAGGTAAGTCATTCTAAATTCCAAGGCTTGAGTTTTTTCATTCCAATCC CAAAAGGGAAAGAAGAAAAAGTAGAATTTAAAAATTACCTTGTTTGATTGATGTGAATTGAATTCTGATTCTGATGTGTT TTATTCCAGATTACTTATTCTGCTGCGTCTTGTTGCCCTTGGTTTTTTCCTTACATGGAGGGTTAGACACCCCAATCATG AGGCAATGTGGCTGTGGGGAATGTCCATAACTTGTGAGCTGTGGTTTGCATTTTCATGGCTTCTTGATCAGCTCCCTAAG CTCTGTCCAGTGAATAGAGTCACTGATTTGTCTGTTCTGAAAGAGAGGTTTGAGTCCCCGAACCTCCGCAACCCGAAAGG GCGGTCTGATCTCCCCGGAATTGATGTGTTTGTTTCCACAGCTGATCCTGAGAAGGAGCCTCCTCTTGTCACTGCAAACA CCATTCTCTCTATCCTTGCAGTTGATTATCCGGTGGAGAAGGTTGCTTGTTACTTGTCTGATGATGGTGGAGCTCTATTG ACATTTGAAGCCCTTGCTGAGACTGCTAGCTTTGCAAGGGTGTGGGTTCCTTTCTGCAGAAAGCATCAAATTGAGCCCAG AAATCCTGAAGCTTATTTTGGGCAGAAGCGTGATTTTCTCAAGAACAAGGTTCGATTGGACTTTGTGAGGGAGAGGAGAA GGGTGAAGAGGGAATATGATGAATTCAAAGTGAGAATAAATTCCTTACCAGAATCCATAAGGAGAAGATCAGATGCTTAC AATGCTCATGAGGAGTTAAGAGCCAAGAAGAAGCAGATGGAAGGTGGTTCCAGTATCTCAGAACCCATCAAGGTTCCTAA AGCAACATGGATGTCTGATGGTTCTCATTGGGCAGGAACTTGGGCATCTGCAGAACCAGAACATTCAAGAGGAGACCATG CTGGCATAATTCAGGTATCTTTCTCGATATTATCAAATTACTTCTGTTGTGTGTGTGGTAATTATGCAGTGTTTGAATCA TAGTAGAGCATTGTCTAACACTGTGCTTCATCTGTTTCAAAAGGCAATGTTAGCTCCACCAAATGCAGAACCAGAATTTG GTGCAGAAGCGGATGCAGAGAACTTGATTGACTCAACCGATGTTGATATCAGATTGCCTATGCTTGTATATGTGTCTCGG GAGAAGAGACCAGCATATGATCATAACAAGAAAGCAGGAGCCATGAATGCTCTTGTTCGCACTAGTGCCATCATGTCTAA TGGTCCATTCATTCTGAATCTCGACTGTGATCATTACATCTACAACTCCTTGGCCATCAGGGAAGGAATGTGCTTCATGC TTGACAGGGGAGGTGACAGGATATGCTATGTCCAGTTCCCTCAAAGGTTTGAGGGCATTGACCCAAGTGACCGATATGCA AATCACAACACAGTGTTCTTTGATGTGGGAATGAGAGCTTTTGACGGCTTACAAGGTCCAATGTATGTGGGAACAGGCTG CATATTCAGGAGAACAGCTCTTTATGGATTTAGTCCTCCTAGAGCTACAGAACATCGCGGTTGGCTTGGCAGAAAGAAAA TTAAGTTGTTTCTGAGAAAGCGCAAGGTGTCAAAAAAGGAAGAAGATGAAGTTGTTGTGCCAATCAATGGTGACCACAAT GATGATGATGCAGATATTGAGTCCTTGCTTATTCCCAAAAGGTTTGGCAACTCTACTTCTCTAGCTGCATCCATTCCTGT GGCAGAGTACCAGGGAAGGTTGCTTCAAGACTTGCAAGGAAGGGGAACACATGGAAGGCCAGCAGGTTCTCTTGCCGTGC CTCGTGAACCATTGGATGCTGCTACTGTTGCAGAGGCGATAAGTGTGATATCTTGTTTCTATGAGGACAAAACTGAATGG GGAAAACGTGTAGGGTGGATATATGGTTCTGTTACAGAAGATGTGGTCACTGGTTACAGAATGCACAATAGAGGGTGGAG ATCTGTGTACTGTGTCACCAAAAGAGATGCATTTAGAGGAACAGCTCCCATCAACTTAACAGATAGGCTCCATCAGGTTC TCCGATGGGCAACAGGTTCTGTAGAGATCTTCTTCTCTAGGAACAATGCATTGTTGGCCAGTCCTAGAATGAAGTTCTTA CAAAGGGTGGCATATTTCAATGTGGGAATGTACCCTTTCACCTCAGGGTTCCTGATTCTCTATTGCTTTCTTCCTGCACT ATCCCTATTCTCAGGGCAGTTTATAGTCCAATCGGTCAATGCAACTTTTCTAGTGTTCTTGCTGGGCATCACAATCACAC TGTGCTTGCTTGCACTGCTTGAGATCAAGTGGTCTGGAATCACTCTACATGACTGGTGGAGAAATGAGCAATTCTGGTTG ATTGGTGGAACAAGTGCCCACCCTGCTGCTGTTTTACAAGGACTGTTGAAGGTGATAGCAGGAGTAGACATCTCCTTCAC CCTGACCTCAAAATCTGCCACTCCAGAAGATGGAGATGATGAGTTTGCTGATTTGTATGAGGTAAAGTGGAGCTTCCTAA TGGTCCCTCCAATTACCATTATGATGGTGAATATGATTGCTATTGCAGTAGGAGTGTCCAGGACTCTGTACAGTCCATTT CCACAATGGAGCAGGCTTGTAGGAGGGGTGTTTTTCAGCTTCTGGGTCTTGTGCCATCTTTACCCCTTTGCAAAAGGACT GTTGGGAAGGAGAGGGAAGGTTCCAACAATTGTCTATGTTTGGTCTGGATTGATCTCCATTATTATCTCCATGCTTTGGG TTTACATAAACCCTCCTGCTGGAAGAACACAGGATTACTTGAATTTCCAGTTCCCTTAGTTTAGAGGAAGATGAAGTACC TCTGCTTCATCTTGAAGTGTGCCAATCATTTGTATGATTAAGTCTATGTTGTATTAAACTGTGAGTGTGTATCCCAGAAA AATTCATGCAGTACTTAGTTTCAAGTAAAATGTTGTCAATATCTCGAATGACCGAGATAAATATGTGTTCAAGCAATATC ATCAATATTATACTTTCTGTTATTCTGATTATTTGTATCCTTTGAAAATTGTGATCACTTAATAATTTTGGGGCACCTAC AATAGAAATTAAAGAGGTCAGAAAACAAATATGTAATTCTACTATTG
CDS sequence (LotjaGi1g1v0761700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTGAAAATGGCAACATCTCCGTCTTCTTCTCCGGTCACCATAACGGTCTCATCCGGCGGAAAAACAGGGGGAAGCAG AAGCATGGGACTAACAAGTCCGGTACCCCGTGCTTCATTCTCCAACAACCCCAATTCCCCTCTCAGCGCCGCCAGATCAA GCAGAGCTTCCACCGGCGGCGGCGGAATCAGGCGGCTATCAGGTGGAGCCACCACTACCACCACCACCACCACCACAGAC AACAGCAACGGAGAAATCAACCCAGAATTCGTGTCATACACTGTTCATATTCCTCCAACACCAGATCGCAGCGTGCCCTT GTCAACCTCACAGACAAGCCTCCCTGAAGATTGCAAAAACCCTACAAGCTACCTCTCCGGTACGATTTTCACCGGAGGGT TCAACTCCGTGACACGAGGCCATGTAATTGATTGCTCCGAGGTGGAAATCGACAAGCCGCCGCTGAAATCTGGGTTGATT TGTGGGATGAAGGGTTGTGATGAGAAAGCAATGCAAATTAGGGGGAGTGGTCCTTGTGAGTGTGGCTTCAAGATCTGCAA GGATTGTTACATTGAGTGCGGCGGAAACCATGGAGCGGGTCGGTGCCCTGGTTGCAAAGAGCCTTACCACAAGGATGTGA GTGAGAGTGAAGAAGAAGAAGAGGAGGAAGAGGAATCTGAGGGTGAAGATCAAGCTCTGCCGTTACCTTCCATGGCGGAA TTCAAATTGGATAAGAGGCTTTCCCTTGTGAAGTCCTTCAAAGCACAGAATCATCCACCTGAATTTGATCACACTCGCTG GCTGTTTGAAACCAAAGGAACCTATGGTTATGGAAATGCTGTGTGGCCTAAAGATGGATATGGTGGTAGCAATGGATACG AACCCCCGCCGGATTTCGGAGAGAGAGCTAGGAGACCCTTGACTCGTAAGGTTGCAGTTTCAGCTGCCATTCTCAGTCCA TATAGATTACTTATTCTGCTGCGTCTTGTTGCCCTTGGTTTTTTCCTTACATGGAGGGTTAGACACCCCAATCATGAGGC AATGTGGCTGTGGGGAATGTCCATAACTTGTGAGCTGTGGTTTGCATTTTCATGGCTTCTTGATCAGCTCCCTAAGCTCT GTCCAGTGAATAGAGTCACTGATTTGTCTGTTCTGAAAGAGAGGTTTGAGTCCCCGAACCTCCGCAACCCGAAAGGGCGG TCTGATCTCCCCGGAATTGATGTGTTTGTTTCCACAGCTGATCCTGAGAAGGAGCCTCCTCTTGTCACTGCAAACACCAT TCTCTCTATCCTTGCAGTTGATTATCCGGTGGAGAAGGTTGCTTGTTACTTGTCTGATGATGGTGGAGCTCTATTGACAT TTGAAGCCCTTGCTGAGACTGCTAGCTTTGCAAGGGTGTGGGTTCCTTTCTGCAGAAAGCATCAAATTGAGCCCAGAAAT CCTGAAGCTTATTTTGGGCAGAAGCGTGATTTTCTCAAGAACAAGGTTCGATTGGACTTTGTGAGGGAGAGGAGAAGGGT GAAGAGGGAATATGATGAATTCAAAGTGAGAATAAATTCCTTACCAGAATCCATAAGGAGAAGATCAGATGCTTACAATG CTCATGAGGAGTTAAGAGCCAAGAAGAAGCAGATGGAAGGTGGTTCCAGTATCTCAGAACCCATCAAGGTTCCTAAAGCA ACATGGATGTCTGATGGTTCTCATTGGGCAGGAACTTGGGCATCTGCAGAACCAGAACATTCAAGAGGAGACCATGCTGG CATAATTCAGGCAATGTTAGCTCCACCAAATGCAGAACCAGAATTTGGTGCAGAAGCGGATGCAGAGAACTTGATTGACT CAACCGATGTTGATATCAGATTGCCTATGCTTGTATATGTGTCTCGGGAGAAGAGACCAGCATATGATCATAACAAGAAA GCAGGAGCCATGAATGCTCTTGTTCGCACTAGTGCCATCATGTCTAATGGTCCATTCATTCTGAATCTCGACTGTGATCA TTACATCTACAACTCCTTGGCCATCAGGGAAGGAATGTGCTTCATGCTTGACAGGGGAGGTGACAGGATATGCTATGTCC AGTTCCCTCAAAGGTTTGAGGGCATTGACCCAAGTGACCGATATGCAAATCACAACACAGTGTTCTTTGATGTGGGAATG AGAGCTTTTGACGGCTTACAAGGTCCAATGTATGTGGGAACAGGCTGCATATTCAGGAGAACAGCTCTTTATGGATTTAG TCCTCCTAGAGCTACAGAACATCGCGGTTGGCTTGGCAGAAAGAAAATTAAGTTGTTTCTGAGAAAGCGCAAGGTGTCAA AAAAGGAAGAAGATGAAGTTGTTGTGCCAATCAATGGTGACCACAATGATGATGATGCAGATATTGAGTCCTTGCTTATT CCCAAAAGGTTTGGCAACTCTACTTCTCTAGCTGCATCCATTCCTGTGGCAGAGTACCAGGGAAGGTTGCTTCAAGACTT GCAAGGAAGGGGAACACATGGAAGGCCAGCAGGTTCTCTTGCCGTGCCTCGTGAACCATTGGATGCTGCTACTGTTGCAG AGGCGATAAGTGTGATATCTTGTTTCTATGAGGACAAAACTGAATGGGGAAAACGTGTAGGGTGGATATATGGTTCTGTT ACAGAAGATGTGGTCACTGGTTACAGAATGCACAATAGAGGGTGGAGATCTGTGTACTGTGTCACCAAAAGAGATGCATT TAGAGGAACAGCTCCCATCAACTTAACAGATAGGCTCCATCAGGTTCTCCGATGGGCAACAGGTTCTGTAGAGATCTTCT TCTCTAGGAACAATGCATTGTTGGCCAGTCCTAGAATGAAGTTCTTACAAAGGGTGGCATATTTCAATGTGGGAATGTAC CCTTTCACCTCAGGGTTCCTGATTCTCTATTGCTTTCTTCCTGCACTATCCCTATTCTCAGGGCAGTTTATAGTCCAATC GGTCAATGCAACTTTTCTAGTGTTCTTGCTGGGCATCACAATCACACTGTGCTTGCTTGCACTGCTTGAGATCAAGTGGT CTGGAATCACTCTACATGACTGGTGGAGAAATGAGCAATTCTGGTTGATTGGTGGAACAAGTGCCCACCCTGCTGCTGTT TTACAAGGACTGTTGAAGGTGATAGCAGGAGTAGACATCTCCTTCACCCTGACCTCAAAATCTGCCACTCCAGAAGATGG AGATGATGAGTTTGCTGATTTGTATGAGGTAAAGTGGAGCTTCCTAATGGTCCCTCCAATTACCATTATGATGGTGAATA TGATTGCTATTGCAGTAGGAGTGTCCAGGACTCTGTACAGTCCATTTCCACAATGGAGCAGGCTTGTAGGAGGGGTGTTT TTCAGCTTCTGGGTCTTGTGCCATCTTTACCCCTTTGCAAAAGGACTGTTGGGAAGGAGAGGGAAGGTTCCAACAATTGT CTATGTTTGGTCTGGATTGATCTCCATTATTATCTCCATGCTTTGGGTTTACATAAACCCTCCTGCTGGAAGAACACAGG ATTACTTGAATTTCCAGTTCCCTTAG
Protein sequence (LotjaGi1g1v0761700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVKMATSPSSSPVTITVSSGGKTGGSRSMGLTSPVPRASFSNNPNSPLSAARSSRASTGGGGIRRLSGGATTTTTTTTTD NSNGEINPEFVSYTVHIPPTPDRSVPLSTSQTSLPEDCKNPTSYLSGTIFTGGFNSVTRGHVIDCSEVEIDKPPLKSGLI CGMKGCDEKAMQIRGSGPCECGFKICKDCYIECGGNHGAGRCPGCKEPYHKDVSESEEEEEEEEESEGEDQALPLPSMAE FKLDKRLSLVKSFKAQNHPPEFDHTRWLFETKGTYGYGNAVWPKDGYGGSNGYEPPPDFGERARRPLTRKVAVSAAILSP YRLLILLRLVALGFFLTWRVRHPNHEAMWLWGMSITCELWFAFSWLLDQLPKLCPVNRVTDLSVLKERFESPNLRNPKGR SDLPGIDVFVSTADPEKEPPLVTANTILSILAVDYPVEKVACYLSDDGGALLTFEALAETASFARVWVPFCRKHQIEPRN PEAYFGQKRDFLKNKVRLDFVRERRRVKREYDEFKVRINSLPESIRRRSDAYNAHEELRAKKKQMEGGSSISEPIKVPKA TWMSDGSHWAGTWASAEPEHSRGDHAGIIQAMLAPPNAEPEFGAEADAENLIDSTDVDIRLPMLVYVSREKRPAYDHNKK AGAMNALVRTSAIMSNGPFILNLDCDHYIYNSLAIREGMCFMLDRGGDRICYVQFPQRFEGIDPSDRYANHNTVFFDVGM RAFDGLQGPMYVGTGCIFRRTALYGFSPPRATEHRGWLGRKKIKLFLRKRKVSKKEEDEVVVPINGDHNDDDADIESLLI PKRFGNSTSLAASIPVAEYQGRLLQDLQGRGTHGRPAGSLAVPREPLDAATVAEAISVISCFYEDKTEWGKRVGWIYGSV TEDVVTGYRMHNRGWRSVYCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNALLASPRMKFLQRVAYFNVGMY PFTSGFLILYCFLPALSLFSGQFIVQSVNATFLVFLLGITITLCLLALLEIKWSGITLHDWWRNEQFWLIGGTSAHPAAV LQGLLKVIAGVDISFTLTSKSATPEDGDDEFADLYEVKWSFLMVPPITIMMVNMIAIAVGVSRTLYSPFPQWSRLVGGVF FSFWVLCHLYPFAKGLLGRRGKVPTIVYVWSGLISIIISMLWVYINPPAGRTQDYLNFQFP
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_GRAM_POSITIVE | 1 | 11 | 11 | - | – | |
| MobiDBLite | 1 | 87 | 87 | - | – | |
| Phobius | 1 | 310 | 310 | - | – | |
| MobiDBLite | 1 | 56 | 56 | - | – | |
| MobiDBLite | 67 | 87 | 21 | - | – | |
| PANTHER | 110 | 1173 | 1064 | 0.0 | – | |
| PANTHER | 110 | 1173 | 1064 | 0.0 | – | |
| SUPERFAMILY | 160 | 211 | 52 | 2.96E-5 | – | |
| Pfam | 165 | 209 | 45 | 2.9E-8 | – | |
| MobiDBLite | 213 | 235 | 23 | - | – | |
| MobiDBLite | 214 | 230 | 17 | - | – | |
| Phobius | 311 | 336 | 26 | - | – | |
| Phobius | 337 | 347 | 11 | - | – | |
| Phobius | 348 | 367 | 20 | - | – | |
| Phobius | 368 | 952 | 585 | - | – | |
| Pfam | 406 | 1173 | 768 | 0.0 | ||
| SUPERFAMILY | 421 | 970 | 550 | 3.66E-8 | ||
| Gene3D | 609 | 753 | 145 | 9.1E-13 | ||
| Phobius | 953 | 976 | 24 | - | – | |
| TMHMM | 957 | 979 | 23 | - | – | |
| Phobius | 977 | 987 | 11 | - | – | |
| Phobius | 988 | 1009 | 22 | - | – | |
| TMHMM | 992 | 1011 | 20 | - | – | |
| Phobius | 1010 | 1086 | 77 | - | – | |
| TMHMM | 1026 | 1048 | 23 | - | – | |
| TMHMM | 1079 | 1101 | 23 | - | – | |
| Phobius | 1087 | 1106 | 20 | - | – | |
| Phobius | 1107 | 1111 | 5 | - | – | |
| TMHMM | 1111 | 1133 | 23 | - | – | |
| Phobius | 1112 | 1133 | 22 | - | – | |
| Phobius | 1134 | 1144 | 11 | - | – | |
| Phobius | 1145 | 1165 | 21 | - | – | |
| TMHMM | 1146 | 1165 | 20 | - | – | |
| Phobius | 1166 | 1181 | 16 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Cellulose synthase (UDP-forming) activity | Catalysis of the reaction: UDP-glucose + ((1,4)-beta-D-glucosyl)(n) = UDP + ((1,4)-beta-D-glucosyl)(n+1). | ||
| Biological process | Cellulose biosynthetic process | The chemical reactions and pathways resulting in the formation of cellulose, a linear beta1-4 glucan of molecular mass 50-400 kDa with the pyranose units in the -4C1 conformation. |
Expression pattern of LotjaGi1g1v0761700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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