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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0761700 |
| Transcript ID | LotjaGi1g1v0761700.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Cellulose synthase-like protein; TAIR: AT1G02730.1 cellulose synthase-like D5; Swiss-Prot: sp|Q9SRW9|CSLD5_ARATH Cellulose synthase-like protein D5; TrEMBL-Plants: tr|V7D0X9|V7D0X9_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0761700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:133457090..133460825) extracted from Lotus japonicus Gifu genome v1.2.
TCCGGCGGAAAAACAGGGGGAAGCAGAAGCATGGGACTAACAAGTCCGGTACCCCGTGCTTCATTCTCCAACAACCCCAA TTCCCCTCTCAGCGCCGCCAGATCAAGCAGAGCTTCCACCGGCGGCGGCGGAATCAGGCGGCTATCAGGTGGAGCCACCA CTACCACCACCACCACCACCACAGACAACAGCAACGGAGAAATCAACCCAGAATTCGTGTCATACACTGTTCATATTCCT CCAACACCAGATCGCAGCGTGCCCTTGTCAACCTCACAGACAAGCCTCCCTGAAGATTGCAAAAACCCTACAAGCTACCT CTCCGGTACGATTTTCACCGGAGGGTTCAACTCCGTGACACGAGGCCATGTAATTGATTGCTCCGAGGTGGAAATCGACA AGCCGCCGCTGAAATCTGGGTTGATTTGTGGGATGAAGGGTTGTGATGAGAAAGCAATGCAAATTAGGGGGAGTGGTCCT TGTGAGTGTGGCTTCAAGATCTGCAAGGATTGTTACATTGAGTGCGGCGGAAACCATGGAGCGGGTCGGTGCCCTGGTTG CAAAGAGCCTTACCACAAGGATGTGAGTGAGAGTGAAGAAGAAGAAGAGGAGGAAGAGGAATCTGAGGGTGAAGATCAAG CTCTGCCGTTACCTTCCATGGCGGAATTCAAATTGGATAAGAGGCTTTCCCTTGTGAAGTCCTTCAAAGCACAGAATCAT CCACCTGAATTTGATCACACTCGCTGGCTGTTTGAAACCAAAGGAACCTATGGTTATGGAAATGCTGTGTGGCCTAAAGA TGGATATGGTGGTAGCAATGGATACGAACCCCCGCCGGATTTCGGAGAGAGAGCTAGGAGACCCTTGACTCGTAAGGTTG CAGTTTCAGCTGCCATTCTCAGTCCATATAGGTAAGTCATTCTAAATTCCAAGGCTTGAGTTTTTTCATTCCAATCCCAA AAGGGAAAGAAGAAAAAGTAGAATTTAAAAATTACCTTGTTTGATTGATGTGAATTGAATTCTGATTCTGATGTGTTTTA TTCCAGATTACTTATTCTGCTGCGTCTTGTTGCCCTTGGTTTTTTCCTTACATGGAGGGTTAGACACCCCAATCATGAGG CAATGTGGCTGTGGGGAATGTCCATAACTTGTGAGCTGTGGTTTGCATTTTCATGGCTTCTTGATCAGCTCCCTAAGCTC TGTCCAGTGAATAGAGTCACTGATTTGTCTGTTCTGAAAGAGAGGTTTGAGTCCCCGAACCTCCGCAACCCGAAAGGGCG GTCTGATCTCCCCGGAATTGATGTGTTTGTTTCCACAGCTGATCCTGAGAAGGAGCCTCCTCTTGTCACTGCAAACACCA TTCTCTCTATCCTTGCAGTTGATTATCCGGTGGAGAAGGTTGCTTGTTACTTGTCTGATGATGGTGGAGCTCTATTGACA TTTGAAGCCCTTGCTGAGACTGCTAGCTTTGCAAGGGTGTGGGTTCCTTTCTGCAGAAAGCATCAAATTGAGCCCAGAAA TCCTGAAGCTTATTTTGGGCAGAAGCGTGATTTTCTCAAGAACAAGGTTCGATTGGACTTTGTGAGGGAGAGGAGAAGGG TGAAGAGGGAATATGATGAATTCAAAGTGAGAATAAATTCCTTACCAGAATCCATAAGGAGAAGATCAGATGCTTACAAT GCTCATGAGGAGTTAAGAGCCAAGAAGAAGCAGATGGAAGGTGGTTCCAGTATCTCAGAACCCATCAAGGTTCCTAAAGC AACATGGATGTCTGATGGTTCTCATTGGGCAGGAACTTGGGCATCTGCAGAACCAGAACATTCAAGAGGAGACCATGCTG GCATAATTCAGGTATCTTTCTCGATATTATCAAATTACTTCTGTTGTGTGTGTGGTAATTATGCAGTGTTTGAATCATAG TAGAGCATTGTCTAACACTGTGCTTCATCTGTTTCAAAAGGCAATGTTAGCTCCACCAAATGCAGAACCAGAATTTGGTG CAGAAGCGGATGCAGAGAACTTGATTGACTCAACCGATGTTGATATCAGATTGCCTATGCTTGTATATGTGTCTCGGGAG AAGAGACCAGCATATGATCATAACAAGAAAGCAGGAGCCATGAATGCTCTTGTTCGCACTAGTGCCATCATGTCTAATGG TCCATTCATTCTGAATCTCGACTGTGATCATTACATCTACAACTCCTTGGCCATCAGGGAAGGAATGTGCTTCATGCTTG ACAGGGGAGGTGACAGGATATGCTATGTCCAGTTCCCTCAAAGGTTTGAGGGCATTGACCCAAGTGACCGATATGCAAAT CACAACACAGTGTTCTTTGATGTGGGAATGAGAGCTTTTGACGGCTTACAAGGTCCAATGTATGTGGGAACAGGCTGCAT ATTCAGGAGAACAGCTCTTTATGGATTTAGTCCTCCTAGAGCTACAGAACATCGCGGTTGGCTTGGCAGAAAGAAAATTA AGTTGTTTCTGAGAAAGCGCAAGGTGTCAAAAAAGGAAGAAGATGAAGTTGTTGTGCCAATCAATGGTGACCACAATGAT GATGATGCAGATATTGAGTCCTTGCTTATTCCCAAAAGGTTTGGCAACTCTACTTCTCTAGCTGCATCCATTCCTGTGGC AGAGTACCAGGGAAGGTTGCTTCAAGACTTGCAAGGAAGGGGAACACATGGAAGGCCAGCAGGTTCTCTTGCCGTGCCTC GTGAACCATTGGATGCTGCTACTGTTGCAGAGGCGATAAGTGTGATATCTTGTTTCTATGAGGACAAAACTGAATGGGGA AAACGTGTAGGGTGGATATATGGTTCTGTTACAGAAGATGTGGTCACTGGTTACAGAATGCACAATAGAGGGTGGAGATC TGTGTACTGTGTCACCAAAAGAGATGCATTTAGAGGAACAGCTCCCATCAACTTAACAGATAGGCTCCATCAGGTTCTCC GATGGGCAACAGGTTCTGTAGAGATCTTCTTCTCTAGGAACAATGCATTGTTGGCCAGTCCTAGAATGAAGTTCTTACAA AGGGTGGCATATTTCAATGTGGGAATGTACCCTTTCACCTCAGGGTTCCTGATTCTCTATTGCTTTCTTCCTGCACTATC CCTATTCTCAGGGCAGTTTATAGTCCAATCGGTCAATGCAACTTTTCTAGTGTTCTTGCTGGGCATCACAATCACACTGT GCTTGCTTGCACTGCTTGAGATCAAGTGGTCTGGAATCACTCTACATGACTGGTGGAGAAATGAGCAATTCTGGTTGATT GGTGGAACAAGTGCCCACCCTGCTGCTGTTTTACAAGGACTGTTGAAGGTGATAGCAGGAGTAGACATCTCCTTCACCCT GACCTCAAAATCTGCCACTCCAGAAGATGGAGATGATGAGTTTGCTGATTTGTATGAGGTAAAGTGGAGCTTCCTAATGG TCCCTCCAATTACCATTATGATGGTGAATATGATTGCTATTGCAGTAGGAGTGTCCAGGACTCTGTACAGTCCATTTCCA CAATGGAGCAGGCTTGTAGGAGGGGTGTTTTTCAGCTTCTGGGTCTTGTGCCATCTTTACCCCTTTGCAAAAGGACTGTT GGGAAGGAGAGGGAAGGTTCCAACAATTGTCTATGTTTGGTCTGGATTGATCTCCATTATTATCTCCATGCTTTGGGTTT ACATAAACCCTCCTGCTGGAAGAACACAGGATTACTTGAATTTCCAGTTCCCTTAG
CDS sequence (LotjaGi1g1v0761700.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGACTAACAAGTCCGGTACCCCGTGCTTCATTCTCCAACAACCCCAATTCCCCTCTCAGCGCCGCCAGATCAAGCAG AGCTTCCACCGACAACAGCAACGGAGAAATCAACCCAGAATTCGTGTCATACACTGTTCATATTCCTCCAACACCAGATC GCAGCGTGCCCTTGTCAACCTCACAGACAAGCCTCCCTGAAGATTGCAAAAACCCTACAAGCTACCTCTCCGGTACGATT TTCACCGGAGGGTTCAACTCCGTGACACGAGGCCATGTAATTGATTGCTCCGAGGTGGAAATCGACAAGCCGCCGCTGAA ATCTGGGTTGATTTGTGGGATGAAGGGTTGTGATGAGAAAGCAATGCAAATTAGGGGGAGTGGTCCTTGTGAGTGTGGCT TCAAGATCTGCAAGGATTGTTACATTGAGTGCGGCGGAAACCATGGAGCGGGTCGGTGCCCTGGTTGCAAAGAGCCTTAC CACAAGGATGTGAGTGAGAGTGAAGAAGAAGAAGAGGAGGAAGAGGAATCTGAGGGTGAAGATCAAGCTCTGCCGTTACC TTCCATGGCGGAATTCAAATTGGATAAGAGGCTTTCCCTTGTGAAGTCCTTCAAAGCACAGAATCATCCACCTGAATTTG ATCACACTCGCTGGCTGTTTGAAACCAAAGGAACCTATGGTTATGGAAATGCTGTGTGGCCTAAAGATGGATATGGTGGT AGCAATGGATACGAACCCCCGCCGGATTTCGGAGAGAGAGCTAGGAGACCCTTGACTCGTAAGGTTGCAGTTTCAGCTGC CATTCTCAGTCCATATAGATTACTTATTCTGCTGCGTCTTGTTGCCCTTGGTTTTTTCCTTACATGGAGGGTTAGACACC CCAATCATGAGGCAATGTGGCTGTGGGGAATGTCCATAACTTGTGAGCTGTGGTTTGCATTTTCATGGCTTCTTGATCAG CTCCCTAAGCTCTGTCCAGTGAATAGAGTCACTGATTTGTCTGTTCTGAAAGAGAGGTTTGAGTCCCCGAACCTCCGCAA CCCGAAAGGGCGGTCTGATCTCCCCGGAATTGATGTGTTTGTTTCCACAGCTGATCCTGAGAAGGAGCCTCCTCTTGTCA CTGCAAACACCATTCTCTCTATCCTTGCAGTTGATTATCCGGTGGAGAAGGTTGCTTGTTACTTGTCTGATGATGGTGGA GCTCTATTGACATTTGAAGCCCTTGCTGAGACTGCTAGCTTTGCAAGGGTGTGGGTTCCTTTCTGCAGAAAGCATCAAAT TGAGCCCAGAAATCCTGAAGCTTATTTTGGGCAGAAGCGTGATTTTCTCAAGAACAAGGTTCGATTGGACTTTGTGAGGG AGAGGAGAAGGGTGAAGAGGGAATATGATGAATTCAAAGTGAGAATAAATTCCTTACCAGAATCCATAAGGAGAAGATCA GATGCTTACAATGCTCATGAGGAGTTAAGAGCCAAGAAGAAGCAGATGGAAGGTGGTTCCAGTATCTCAGAACCCATCAA GGTTCCTAAAGCAACATGGATGTCTGATGGTTCTCATTGGGCAGGAACTTGGGCATCTGCAGAACCAGAACATTCAAGAG GAGACCATGCTGGCATAATTCAGGCAATGTTAGCTCCACCAAATGCAGAACCAGAATTTGGTGCAGAAGCGGATGCAGAG AACTTGATTGACTCAACCGATGTTGATATCAGATTGCCTATGCTTGTATATGTGTCTCGGGAGAAGAGACCAGCATATGA TCATAACAAGAAAGCAGGAGCCATGAATGCTCTTGTTCGCACTAGTGCCATCATGTCTAATGGTCCATTCATTCTGAATC TCGACTGTGATCATTACATCTACAACTCCTTGGCCATCAGGGAAGGAATGTGCTTCATGCTTGACAGGGGAGGTGACAGG ATATGCTATGTCCAGTTCCCTCAAAGGTTTGAGGGCATTGACCCAAGTGACCGATATGCAAATCACAACACAGTGTTCTT TGATGTGGGAATGAGAGCTTTTGACGGCTTACAAGGTCCAATGTATGTGGGAACAGGCTGCATATTCAGGAGAACAGCTC TTTATGGATTTAGTCCTCCTAGAGCTACAGAACATCGCGGTTGGCTTGGCAGAAAGAAAATTAAGTTGTTTCTGAGAAAG CGCAAGGTGTCAAAAAAGGAAGAAGATGAAGTTGTTGTGCCAATCAATGGTGACCACAATGATGATGATGCAGATATTGA GTCCTTGCTTATTCCCAAAAGGTTTGGCAACTCTACTTCTCTAGCTGCATCCATTCCTGTGGCAGAGTACCAGGGAAGGT TGCTTCAAGACTTGCAAGGAAGGGGAACACATGGAAGGCCAGCAGGTTCTCTTGCCGTGCCTCGTGAACCATTGGATGCT GCTACTGTTGCAGAGGCGATAAGTGTGATATCTTGTTTCTATGAGGACAAAACTGAATGGGGAAAACGTGTAGGGTGGAT ATATGGTTCTGTTACAGAAGATGTGGTCACTGGTTACAGAATGCACAATAGAGGGTGGAGATCTGTGTACTGTGTCACCA AAAGAGATGCATTTAGAGGAACAGCTCCCATCAACTTAACAGATAGGCTCCATCAGGTTCTCCGATGGGCAACAGGTTCT GTAGAGATCTTCTTCTCTAGGAACAATGCATTGTTGGCCAGTCCTAGAATGAAGTTCTTACAAAGGGTGGCATATTTCAA TGTGGGAATGTACCCTTTCACCTCAGGGTTCCTGATTCTCTATTGCTTTCTTCCTGCACTATCCCTATTCTCAGGGCAGT TTATAGTCCAATCGGTCAATGCAACTTTTCTAGTGTTCTTGCTGGGCATCACAATCACACTGTGCTTGCTTGCACTGCTT GAGATCAAGTGGTCTGGAATCACTCTACATGACTGGTGGAGAAATGAGCAATTCTGGTTGATTGGTGGAACAAGTGCCCA CCCTGCTGCTGTTTTACAAGGACTGTTGAAGGTGATAGCAGGAGTAGACATCTCCTTCACCCTGACCTCAAAATCTGCCA CTCCAGAAGATGGAGATGATGAGTTTGCTGATTTGTATGAGGTAAAGTGGAGCTTCCTAATGGTCCCTCCAATTACCATT ATGATGGTGAATATGATTGCTATTGCAGTAGGAGTGTCCAGGACTCTGTACAGTCCATTTCCACAATGGAGCAGGCTTGT AGGAGGGGTGTTTTTCAGCTTCTGGGTCTTGTGCCATCTTTACCCCTTTGCAAAAGGACTGTTGGGAAGGAGAGGGAAGG TTCCAACAATTGTCTATGTTTGGTCTGGATTGATCTCCATTATTATCTCCATGCTTTGGGTTTACATAAACCCTCCTGCT GGAAGAACACAGGATTACTTGAATTTCCAGTTCCCTTAG
Protein sequence (LotjaGi1g1v0761700.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGLTSPVPRASFSNNPNSPLSAARSSRASTDNSNGEINPEFVSYTVHIPPTPDRSVPLSTSQTSLPEDCKNPTSYLSGTI FTGGFNSVTRGHVIDCSEVEIDKPPLKSGLICGMKGCDEKAMQIRGSGPCECGFKICKDCYIECGGNHGAGRCPGCKEPY HKDVSESEEEEEEEEESEGEDQALPLPSMAEFKLDKRLSLVKSFKAQNHPPEFDHTRWLFETKGTYGYGNAVWPKDGYGG SNGYEPPPDFGERARRPLTRKVAVSAAILSPYRLLILLRLVALGFFLTWRVRHPNHEAMWLWGMSITCELWFAFSWLLDQ LPKLCPVNRVTDLSVLKERFESPNLRNPKGRSDLPGIDVFVSTADPEKEPPLVTANTILSILAVDYPVEKVACYLSDDGG ALLTFEALAETASFARVWVPFCRKHQIEPRNPEAYFGQKRDFLKNKVRLDFVRERRRVKREYDEFKVRINSLPESIRRRS DAYNAHEELRAKKKQMEGGSSISEPIKVPKATWMSDGSHWAGTWASAEPEHSRGDHAGIIQAMLAPPNAEPEFGAEADAE NLIDSTDVDIRLPMLVYVSREKRPAYDHNKKAGAMNALVRTSAIMSNGPFILNLDCDHYIYNSLAIREGMCFMLDRGGDR ICYVQFPQRFEGIDPSDRYANHNTVFFDVGMRAFDGLQGPMYVGTGCIFRRTALYGFSPPRATEHRGWLGRKKIKLFLRK RKVSKKEEDEVVVPINGDHNDDDADIESLLIPKRFGNSTSLAASIPVAEYQGRLLQDLQGRGTHGRPAGSLAVPREPLDA ATVAEAISVISCFYEDKTEWGKRVGWIYGSVTEDVVTGYRMHNRGWRSVYCVTKRDAFRGTAPINLTDRLHQVLRWATGS VEIFFSRNNALLASPRMKFLQRVAYFNVGMYPFTSGFLILYCFLPALSLFSGQFIVQSVNATFLVFLLGITITLCLLALL EIKWSGITLHDWWRNEQFWLIGGTSAHPAAVLQGLLKVIAGVDISFTLTSKSATPEDGDDEFADLYEVKWSFLMVPPITI MMVNMIAIAVGVSRTLYSPFPQWSRLVGGVFFSFWVLCHLYPFAKGLLGRRGKVPTIVYVWSGLISIIISMLWVYINPPA GRTQDYLNFQFP
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 66 | 66 | - | – | |
| Phobius | 1 | 261 | 261 | - | – | |
| MobiDBLite | 7 | 40 | 34 | - | – | |
| PANTHER | 67 | 1124 | 1058 | 0.0 | – | |
| PANTHER | 67 | 1124 | 1058 | 0.0 | – | |
| SUPERFAMILY | 111 | 162 | 52 | 2.83E-5 | – | |
| Pfam | 116 | 160 | 45 | 2.8E-8 | – | |
| MobiDBLite | 164 | 186 | 23 | - | – | |
| MobiDBLite | 165 | 181 | 17 | - | – | |
| Phobius | 262 | 287 | 26 | - | – | |
| Phobius | 288 | 298 | 11 | - | – | |
| Phobius | 299 | 318 | 20 | - | – | |
| Phobius | 319 | 903 | 585 | - | – | |
| Pfam | 357 | 1124 | 768 | 0.0 | ||
| SUPERFAMILY | 372 | 921 | 550 | 3.19E-8 | ||
| Gene3D | 560 | 704 | 145 | 8.6E-13 | ||
| Phobius | 904 | 927 | 24 | - | – | |
| TMHMM | 908 | 930 | 23 | - | – | |
| Phobius | 928 | 938 | 11 | - | – | |
| Phobius | 939 | 960 | 22 | - | – | |
| TMHMM | 943 | 962 | 20 | - | – | |
| Phobius | 961 | 1037 | 77 | - | – | |
| TMHMM | 977 | 999 | 23 | - | – | |
| TMHMM | 1030 | 1052 | 23 | - | – | |
| Phobius | 1038 | 1057 | 20 | - | – | |
| Phobius | 1058 | 1062 | 5 | - | – | |
| TMHMM | 1062 | 1084 | 23 | - | – | |
| Phobius | 1063 | 1084 | 22 | - | – | |
| Phobius | 1085 | 1095 | 11 | - | – | |
| Phobius | 1096 | 1116 | 21 | - | – | |
| TMHMM | 1097 | 1116 | 20 | - | – | |
| Phobius | 1117 | 1132 | 16 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Cellulose synthase (UDP-forming) activity | Catalysis of the reaction: UDP-glucose + ((1,4)-beta-D-glucosyl)(n) = UDP + ((1,4)-beta-D-glucosyl)(n+1). | ||
| Biological process | Cellulose biosynthetic process | The chemical reactions and pathways resulting in the formation of cellulose, a linear beta1-4 glucan of molecular mass 50-400 kDa with the pyranose units in the -4C1 conformation. |
Expression pattern of LotjaGi1g1v0761700.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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