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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0761900 |
| Transcript ID | LotjaGi1g1v0761900.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Dehydration-induced 19-like protein; TAIR: AT4G02200.1 Drought-responsive family protein; Swiss-Prot: sp|Q5W794|DI192_ORYSJ Protein DEHYDRATION-INDUCED 19 homolog 2; TrEMBL-Plants: tr|A0A072U404|A0A072U404_MEDTR Drought-induced protein; Found in the gene: LotjaGi1g1v0761900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:133467664..133471955) extracted from Lotus japonicus Gifu genome v1.2.
CTAAGGATCCGGTCACGAACGCAATAGCCACGTAGAATCCGAATTGGAAAGTCCTCGGTATTTTCCGAGTAAACACTGTA TTATATATCTTCCACTTCCACCACAACCACCCACACGAACAACAACAACGATTCCTGAATCAACAACTCTACTCCTCTGC AATTCAATCAACAACGATTTTCATTGTCTTGTTCCAGAAAAAACATCTCAGTTCTTTGCATATGTCAATGGAAGGCGAGG ATTTGAGCTTTGGTCTCTCCACTGCTTCTAGAACCCACCGATCGAGGCTAAAGTCACACTTTGGTGATTCCCTGTTTCAA ACATCATTCTATTCCTTCATTTTCTATTTGGGTATCTGGTTTTGTTCTCAAAGTTTAATATTTTTGTTTGTTTGGCGTTG AAGCAGAGCTCTTTGTTGATTTTGAGGAGGATGAGGTAATTGGGGATGATGATGACGATGATGATGAGTTAAGGACGGCT TATCCATGCCCGTTTTGTGAAGAGGATTTTGATCTTCTAGAGCTATGTTGCCATATTGACTTGGACCATCAAATAGAAGC CAAGTCTGGGGTATACTATTTATTGCTTTAATTCCTCAACTTTTCATTTTTACTTTTAGCTTTTATTGTTAGTACATCAA TATTTTCTGTACCTTTGCCCTTGCTTTTAGTAATCTATCCAAGTAGGTAATTTTCATAGATAACCATAACTCAGCTCCAT CATAAGCCTTTTAATTTTGCAATTATGTCAATAAGAGAGACTTGTTTTGCTGCTTGGTCAGGAAAGTTCCTTAGTAGTTA TTAACTTTGTAATTGTCTAATTGATTTGTTGCTTTTGTGTTCCCTCTTAGACCAAAATGTCTGAACTCATAAGCATAAGT TTAACTTATATCAGTAAATTCACAAAGAAACAGATGATTGTGATTGCATTTGAGATATTATAATGGATCCAACAAATACA AGTTATTTTGGGGGAAATAACTTGTCAATCATATTAAGATTGTAATTTGAGTCCATTTTCTTCTTTGTCATCATTGGAGA CAATAGACATCAAATAGTCACTGTTAAAATCGATTGAGATGGCTTTTCTTTCGAAGTGGGCTCTGTTCAATTGTGCATCT ATGGCATCTGAAATATTGATTTTTTGTTTTGTTTATGATTATTGGCTTGATTATACTGACTTGAGGTTGACCACTATGTA GTGTTGTAAAGTTAAACCATGTCAGGGTTTTCTTATTGGATTTTTTATATATATTGCATGTATGCAGAAGCCCTTAAAGG TGTGGTTCCTGACAAGATCTTAGCTTGTAGTACCTGAAGGGGTTACTCCAATATGAATCTAATTAGTTTCCATGTAAAGT TGATGTTGTTACTTTTTTATCTACCAAATTCTTATATGATTAGGCCAAGATTAACACACCAATTGAACTTTAGGGAGATT GCAAGTAACCAATAACTTTCAAATCCATCATGGACCAAAAAGTAACTAAAATATCAATTAAACCCTCAAACTATGAGGAA TGTAGCAATGGGTTGTTACTCCAGATTCCAGAGTTCCAGTTCTGTTACAATATCTGTTTATCATGTGATCCCTAATTTTC TTTAGTATTTCATACTTAAAAATATCAAAATGTTTAACTGAAATACTTCCTTAAATGTTCATTTGATGTGGATAGTGAAA GGTGATACAAATGTATTAAACAGTCACTGCGTGGTTATCACATAATTTGCAAGAATTTGTTACAAAGGGGAAGAGAATAA TCTATTGTGATAATTTTTTTCCCAATTTGAGGGTTCAATTGGCGGATTTAGAAGTTCCTGATGGCTACTTGCAATAGTCC CAAAATTCAGAAGTGTGTATAACTTTTCTTATACAATTGATGTATTTCTCTATTGACTTGTCTTTTGTACTACATTTTGT GCTTGTTGAATAACACTCAGTTATGTCCATCTTTGTAGGTGCAGCTTTGTCCTGTTTGTGCCGTGTGGATAGGGGCAAAT ATGGTTGAGCACATAGCAGCACAACATGGAAACATATTTAAGATATCCTTTCTGATCTACCTGATAGAAATGCTACTATT TATTCAAAATAATACTATTAATTGCTGTTTCTTCTGTTTTCTTTTACCAAAGTCTTCTACTTCTTATGCTTCTTATTATT GTTGTTTTTTTGTCCTTCATTCAACTTTGTACTTCCTTGACGGGAGATTACAGTCAACTCAAATCAAAACGCCACCAGCA TGATTCCTACCCAACTCTTTCCTTTTCAAGAAAGGATGAAGAGGATAGACACTGGGAATCTTTTTATGCTGGGTCATCTC CTGTGACGTCTACCTCCGAGACAGCGCGTGATCCATTGCTATCATTTTTATGTGGTGCAGCTGCTGCTGGTGAACACCAA AATGTGCAGCCTGATTCTTCAAGTGAATTAAGCATTGAAGAAACACATTCAGATGATACAGTGTTAGAAAGGTATGAAGT ATCACTCTGTCTTTTTTTTGTCTTTGACTCGATATCCACTCCACACACATGTAGCTGTTCCTGTGGGACTAGTCTCCAGG TCTCCCCAAAGCGGTGATTCTAATATTTGAACCCCCCCCCCTGCCCCCCACATTGCCGGTAAAGTTTGACAGTGGTCACC AAATGATTACCACCACTACCAACCATAAACTGATGTTTCTTAAACACCCCATTTCTAATGAGAAAAGAATAAAAGAGAAA GAAGTGAGACATGTGATGAGAAAATAAGAGATATATAGAAAGAAAAAATGTGAAATTGGGATGGAAAAGAAAGTGAGTAT GAATATATTGAAGTTCTATCACTATACCACATTCCTCATGTATTATCAAAACATCAACTAGTAAATCATAAATTTCTTCA GCAAGTTGCTTGATCCATAGTTGTATAGTTTGTGGAAGGTAAATAGTCAATATTCAGAGCAGTAAATTATTATTACTAAC TAGATGATTGATAGTGCCAAAAACTTGACTTTCTGAGACCACCCTTTTACTTTTGAAGCAGCAACCTAAAAATATTCAAA ACAGACACCTCGCCTGAAATCAATAGAGGCATCCCTCTATTGCAGTAGGTTTTGATTGCTTTTTTAGTAATTTTCAGAAT TCTTAGTGCATTTAACTCTAGCTTTCACTGTAGTTATGTTAATATAGTAATAATGAGGCAAATGTACTCTTGTTCTAGAC CTGAGCTTCATCTGATATTGAGTCAATGATTTTTTGAGCCAAAAACCTGGCTGTATATGCAAATAACAGGGTTCTTGAGT TCTCTTGTTTCTTTCTTGTATTTGTTTTTTGGTTAAAATCTTAGAGACTTAGAGTACCATTTTGGTTATTTGTGCCCTGT AACATGTCATTCATCAACTTCCTATTGACTTGCTCTTCCGTTTAACATTGTATTCTTTGTTAAGAATAAGATTTTTAGCT TAGGTGACTTTTTATATATCCCTCTTAGATATGTAACATAATATTTCTATTACTGCAGAGATGTTGAGCCATCTTTACCC GACAAAGACCGCATAGAGAAAGCTCGGCGTAGTAAATTTGTACAGGGACTTTTGATGTCCACTTTCCTTGATCCTGACTT GTGATCGAGACAATCAGGAACATCAGTGGTTAATATCAATTCGATGGAGGAAATAAAAGGAGAAAGTAGAGTTAGTTTCA ATCTTGAAAATTATTCATAGTCACAGGCCAGTATTTGTGTTTGTATGAATTGTAATGTGGTATATCTAGTTTAGAGAGCT CAAATACATGTAGGAATCAAATGTAATGAGTGTTCAAGGCAATGCAGTTATTAGTTCAGAACAATTGCATATCCTCTTCT ATTCCCCCTCTCAGGACTTCATCCATTAGTTTTTGTAGTTCACTCCATATTCCTTTAGCATGTATTAACTAATTTTTCCT CAGAATTAATTCTGGTACTCAGATTTTACTCATAGAAGCTGATGGTTCCCTTATAATTGATTTTGACTTCTAAATCAATT GTAAAATAGTTTCAAACATGTTATTATGGGTTATATCTGAGATTACAAGATTAAAATGCGCTTATGTCATGCACTTATGA CCAACAGAGGTGTAGCATGCAAATTATTATTTTTCTGGCTTTCTCAGAAAAATAAGATGTTCCGTTTATTCCAGTACGAA ATTAAGCTTCTTTTGTTTATTTCTATGGTGGCATTTTCTTGGTACCAATTTGAGCTAAATACTATCGCAGTATTGAGGGC AGATTAGTAAGAAGTGAAACATCGTACTTCACTTAATTTTACTAGTGGCAAG
CDS sequence (LotjaGi1g1v0761900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCTTCTTATTATTGTTGTTTTTTTGTCCTTCATTCAACTTTGTACTTCCTTGACGGGAGATTACAGTCAACTCAAATC AAAACGCCACCAGCATGATTCCTACCCAACTCTTTCCTTTTCAAGAAAGGATGAAGAGGATAGACACTGGGAATCTTTTT ATGCTGGGTCATCTCCTGTGACGTCTACCTCCGAGACAGCGCGTGATCCATTGCTATCATTTTTATGTGGTGCAGCTGCT GCTGGTGAACACCAAAATGTGCAGCCTGATTCTTCAAGTGAATTAAGCATTGAAGAAACACATTCAGATGATACAGTGTT AGAAAGAGATGTTGAGCCATCTTTACCCGACAAAGACCGCATAGAGAAAGCTCGGCGTAGTAAATTTGTACAGGGACTTT TGATGTCCACTTTCCTTGATCCTGACTTGTGA
Protein sequence (LotjaGi1g1v0761900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLLIIVVFLSFIQLCTSLTGDYSQLKSKRHQHDSYPTLSFSRKDEEDRHWESFYAGSSPVTSTSETARDPLLSFLCGAAA AGEHQNVQPDSSSELSIEETHSDDTVLERDVEPSLPDKDRIEKARRSKFVQGLLMSTFLDPDL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 17 | 17 | - | – | |
| SignalP_EUK | 1 | 17 | 17 | - | – | |
| Phobius | 1 | 1 | 1 | - | – | |
| Phobius | 2 | 12 | 11 | - | – | |
| Phobius | 13 | 17 | 5 | - | – | |
| Phobius | 18 | 143 | 126 | - | – | |
| PANTHER | 21 | 142 | 122 | 1.2E-37 | – | |
| PANTHER | 21 | 142 | 122 | 1.2E-37 | ||
| Pfam | 38 | 137 | 100 | 4.9E-26 | ||
| MobiDBLite | 83 | 119 | 37 | - | – | |
| MobiDBLite | 96 | 119 | 24 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0761900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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