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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0763300 |
| Transcript ID | LotjaGi1g1v0763300.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Pectinesterase; TAIR: AT4G02320.1 Plant invertase/pectin methylesterase inhibitor superfamily; Swiss-Prot: sp|P85076|PME_ACTDE Pectinesterase; TrEMBL-Plants: tr|A0A1J7G4W6|A0A1J7G4W6_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0763300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:133601377..133605841) extracted from Lotus japonicus Gifu genome v1.2.
ACAGCATTGAGAGTTCCACCTCAAATTCTAAGAACACCGAGCATGTGTCAAAATTTTATTGATGAAACATAACATTAGGG GACAAGTTTCACTCAATGCTAGCTAGTGTCCTCTGTGAGATCTGAACCCACACTAGTTCATTTATGCTCCAACTACCCTA TCTGTCCACCGCATTCCCATCAGTATACCACTTCACGAACACTATTAATCTCATCAGTCATAGAGCTTGATCCAGCTCCT ATCACTTATTTTCTCCTTCTCCACGATGTACAACCCCATGAGGAAAAAAACAGCACCCTTCCTAACTCTTATACCCATTC TCACCCTTGTTTTCGTGGTCCTCATCTTTTCAGTAACTCACATCCAAAAAGCAACAAAACCACAAGCAACACACCACCTC CATATTCAAAAGCACATCCAACTCCAAGTGGCACACTCCACATGCGAAGGAACACTCTACCCAGAACTATGCGTCTCAAC TTTATCCTCCTTCCCAGATCTCACCTCAAAATCCCTCCCACAAATGATTTGCTCTGCCCTCAACCACACCATCGACGAGG TCAAATTGTCCTCCTCCAACTGCAGCAGCATCCAGAACCTCCGAAACCTCGACAAACTCGAGCAGAGAGCCCTCGACGAC TGCCTCAATTTATTCGATGACACCACCGCAGAGCTCAAAAGCACCATTGCTGATCTCTCTCAAACCACAGTAGGCTCCAA TGGCTACCATCACTGTCAGACACTTCTTAGCGGCGCCATGACAAATGTGTACACTTGTCTCGACGGTTTTGCTTACAGTA AAGGGAGCGTGAGGAGCAAAATACAGAAGGAGTTGTTTGACATTAGCCATCACGTGAGTAACTCACTCGCCATGCTTAAG AAAGTTCCTGGAGTGAAGAGACAACTGTATTCCAGTAAGTCTGAGACTTTCCCTGAATATGGTAAGTTGAAAGATGGGTT TCCATCTTGGGTTTCCCCTAAAGACAGGAAGCTACTACAAGCTGCCGTGAATGAGACCAAGTTTGATCTTGTGGTGGCTA AAGACGGCACCGGAAACTTCGCCACTATAGGGGAAGCTGTGGCTGCTGCTCCTAACTCCAGCGCAACTAGGCAAGTACAA ATTTATTCAACTTTTTTTACTAATCATGTTTTTCCCTACACAATACTCGAAATTGAGACATGATACTTAATTAAGGAAGA TCTGATATTAATTATATATACATCATAATTTGTATACTCTATTGGCTATTCTCATTAATTAGTTGTTATCAATGTGGTCT TTTTCATTATTTTTGCCATTAGTGATGTGAAGTTGAATTGTGTTTTCATAGGTTTGTTATACACATAAAAGCTGGGGCTT ACTTTGAGAACGTGGAGGTGATAAGGAAGAAGACGAATGTGATGTTTGTGGGAGATGGGATTGGAAAGACTGTTGTGAAG GCCAACAGGAATGTCGTGGATGGCTGGACCACCTTTCAATCAGCTACTGTCGGTGCGTTGTTAAGTCGACTAATTTCTTT CTTTAATCTTCCTAGTTAGTACAGTAGGAGTACTATTTTTCTCATCAATAATTCATCAATAATGATAGAATGATATGTGA ACGTACACGTAAAAAAAGTTCATGACGTACGCTCAAAAGACATGTTGATTAGTGACTGTTTTTAATTTCGATAGACATTT TAGGGTCCAGCTTCTCTTATTCACTTTAGGTGAAAAATAAGCATTATTTGTGAGTAATTATTTTAAAAAGGTAAACAAAA TAACTCAATTAATTATTGTAAATGACGCAAATAGGCAATGATATTTGGAGTATATGCACGCTTCAATTATGAGGTGTGGT AAGTTATGAGGTCTCTAGTAACTAGTAAGTTATTTGGACGCCCGACCACTTCCTGTCTCCTTATGAGGTCTCTAGTAAGT TATTCAGAGATCAGACTTCTCATTCTCATACTTTTGCATGCATCAATCGTTTTCTTCACCCACTTCTTTCCAATTATCCG GTACTCTTGTCTTCCCATGATTCTTCTACAATGGTGGATTCTGCTTGTAAAAAATAGTGTAGTTGAACTTGGAATTACTA AAGAAGACCTCTGCATTATTGCTCTTGTACGCTCCCGTAAAGTAGACCTACCTTCATTTTGTTTTTTAGTCACAAACGTG CTTTTGGAATTGGACAACATAAGTAGTCCACACACATTGCTCCAACCCAACAAAAGAAGAATTTTGTTTTAATTTGGACC TTCCATACTTTAACTACATTAGGCCCACTTTTCCAATCTCTTCTTCTATATATGCTTAATTTTGTTTTTGGAAATGTTCT TCTAGGCTTAATTTGCTGCCAAAACATGGATACTTCACTTTGCTGTTTTTTTCATCAATGCTTCGCTATTTTTTTTTCTT TATCAATGCATTACTTTGGGGTTGGGCTTGGGGGTATACATGAGGGTGGGATTTGCATGAATCAACCTCTCGTAATTTCA ATTTATGTCTGGTACCTTGAACATTTTTATGTTATAATTTGCCCACTAATTAAAGGAAAATGATGGTCATAGTGCATGCA TTAATCATCCATCCATCATCAAAGTGATGAGAAACGAAGATAATAGAAAGAAGTACTAATTGATGTGATATAAAATATAC TCCCTCCGTTCCTTATTAACTGTCCACTTTAAAGAAAAAAATTTATTCCTATATATCTGTCAACTTAGAGTTTCAAGAGA GCATTAAATGATGTTTTTCCAAGAAATGTCCTTGCAGGAACAATAAATGAGGAAAGATAATATACATATTAATGGGTGAA ATAGGAAATCAAATAATACTTTTATGAAAAGTAACAAAATTAATTGCACTCCTTAATATGTGTGTTTCTTCTCTTCCCGG ATAGTTAAATAGGAACGGAGGGAGTAAGAGAGATAGATTAAAAGTGAGATGTGTTTTGAATTTCACAATATTTATTTGTA TGAATATCATTACTCCTAATTAAACTCACTATTGGTCCTCGTAGGATAGCTTAAGTTGTAGGAGCTAAGCAACATATGAG TTGGGTAGGGGAGGTCAAGGAAATGACGGGTGTAATTTATCTTTCCGATGTAAAAAAAAAACTCATTAGAGGATACATCC CATGCAGCTTTTAGTGACGGCATTTTACCGTCACGAAATAAAAAATAGAGAAAAAAATAACTATACTACTTTGCGGCGAT AAGAAACTGCCACAAAAATGAACAAACTGACATTAAGCGTCTGATATTTGTGGTTTCGTTTTCAGCTGTGGTAGGAGACG GATTCATAGCAAAAGGCATAACCTTTGAGAACTACGCCGGAGCCAGCAAACACCAAGCCGTGGCCCTGAGGAGCGGTTCC GACCTCTCCGCCTTCTACCAATGCAGCTTCGTCGCCTACCAAGACACTCTCTACGTCCACTCCCTCCGCCAATTCTACCG CGAATGCGACATTTACGGCACCGTCGACTTCATCTTCGGCAACGCCGCAGTGGTCTTCCAAAACTGCAACCTCTACGCTC GCAAGCCCGACCCAAAACAGAAGAATCTATTCACCGCACAAGGTAGAGAAGATCCAAACCAGAACACTGGGATTTCCATC TTGAATTGCAAGGTTGCTGCGGCTGCAGATTTGATCCCGGTGAAGGCGTCGTTCAAGAGTTACCTGGGTAGGCCTTGGAA GAAGTATTCGAGAACGGTTTTTCTGAATTCTTACATAGAGGATTTGATTGACCCTGTTGGGTGGTTGGAATGGGATGGAA CGTTTGCATTGGATACTCTGTATTATGGGGAGTACAAGAACAGAGGACCTGGTTCCAATACAAGTGCTAGAGTTACATGG CCGGGTTATAAGGTCATCAGTAGTTCTACTGAGGCAAGTCAATTCACAGTTGGGGAGTTCATACAAGGTAATAATTGGTT GAGCTCTACTGGAATTCCATTCTTCTCTGGTTTGAGTTGAAGGGTTATGGTTTATATAGTTTACTATGCTCTTTTTGTTT CCTTGTTATGCACTAAAATTATAATGTGAATTGTTGCAATAATGGGTGGGAAATAAGCAATGAATAATCAAAAGTATTTA GAAGCATTGACTTTTGTGCTTCTTCCTTCTACATGGAAATCAGTGTAGACCTTCCTCTTGTCTTGACTAAGGATCAAGAT GTAATAATAATGTGTTGGAGGTGGAGGGGGAAGCTGTTGAAAAAGTGTAAATGAATCTTATTTTATCTGATGAGTATTGT TTCCAATATATAGCTTTAAGCCACTTTGTTATCTTTACATGGTGTAATTAGTGACGGATCTAGAAATTTAATGTGGTGAG GGCAATATATACATGTAAATTCGTAAAAAAAAAATTAACATATACTATTAGAAGTTATGAATTTTTTTACCAAAGCGGAT ACAAGTGAAAGCATTTTTCACCAAGGAGGTAATCAAAAACCAGACTTTTACTACTCAAGTGAGGG
CDS sequence (LotjaGi1g1v0763300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTTGTGGGAGATGGGATTGGAAAGACTGTTGTGAAGGCCAACAGGAATGTCGTGGATGGCTGGACCACCTTTCAATC AGCTACTGTCGCTGTGGTAGGAGACGGATTCATAGCAAAAGGCATAACCTTTGAGAACTACGCCGGAGCCAGCAAACACC AAGCCGTGGCCCTGAGGAGCGGTTCCGACCTCTCCGCCTTCTACCAATGCAGCTTCGTCGCCTACCAAGACACTCTCTAC GTCCACTCCCTCCGCCAATTCTACCGCGAATGCGACATTTACGGCACCGTCGACTTCATCTTCGGCAACGCCGCAGTGGT CTTCCAAAACTGCAACCTCTACGCTCGCAAGCCCGACCCAAAACAGAAGAATCTATTCACCGCACAAGGTAGAGAAGATC CAAACCAGAACACTGGGATTTCCATCTTGAATTGCAAGGTTGCTGCGGCTGCAGATTTGATCCCGGTGAAGGCGTCGTTC AAGAGTTACCTGGGTAGGCCTTGGAAGAAGTATTCGAGAACGGTTTTTCTGAATTCTTACATAGAGGATTTGATTGACCC TGTTGGGTGGTTGGAATGGGATGGAACGTTTGCATTGGATACTCTGTATTATGGGGAGTACAAGAACAGAGGACCTGGTT CCAATACAAGTGCTAGAGTTACATGGCCGGGTTATAAGGTCATCAGTAGTTCTACTGAGGCAAGTCAATTCACAGTTGGG GAGTTCATACAAGGTAATAATTGGTTGAGCTCTACTGGAATTCCATTCTTCTCTGGTTTGAGTTGA
Protein sequence (LotjaGi1g1v0763300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MFVGDGIGKTVVKANRNVVDGWTTFQSATVAVVGDGFIAKGITFENYAGASKHQAVALRSGSDLSAFYQCSFVAYQDTLY VHSLRQFYRECDIYGTVDFIFGNAAVVFQNCNLYARKPDPKQKNLFTAQGREDPNQNTGISILNCKVAAAADLIPVKASF KSYLGRPWKKYSRTVFLNSYIEDLIDPVGWLEWDGTFALDTLYYGEYKNRGPGSNTSARVTWPGYKVISSSTEASQFTVG EFIQGNNWLSSTGIPFFSGLS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 260 | 260 | 8.0E-168 | – | |
| PANTHER | 1 | 260 | 260 | 8.0E-168 | – | |
| Pfam | 1 | 246 | 246 | 4.6E-125 | ||
| SUPERFAMILY | 1 | 259 | 259 | 4.19E-97 | ||
| Gene3D | 1 | 260 | 260 | 2.2E-111 | ||
| ProSitePatterns | 93 | 102 | 10 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Pectinesterase activity | Catalysis of the reaction: pectin + n H2O = n methanol + pectate. | ||
| Biological process | Cell wall modification | The series of events leading to chemical and structural alterations of an existing cell wall that can result in loosening, increased extensibility or disassembly. |
Expression pattern of LotjaGi1g1v0763300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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