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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR033131
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 111 results. Now displaying 1 of 3 with 50 rows per page. This search has taken 5.425s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0004749.1
n.a. PREDICTED: probable pectinesterase/pectinesterase inhibitor 7-like [Vitis vinifera] gi|359479963|ref|XP_002268492.2| chr0 1761412 1762646 +
2 domain predictions
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Lj0g3v0008659.1
n.a. PREDICTED: probable pectinesterase/pectinesterase inhibitor 36-like [Glycine max] gi|356506381|ref|XP_003521962.1| chr0 3510033 3514365 +
2 domain predictions
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Lj0g3v0083289.1
n.a. PREDICTED: probable pectinesterase/pectinesterase inhibitor 7-like [Glycine max] gi|356570974|ref|XP_003553657.1| chr0 32893415 32902115 +
2 domain predictions
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Lj0g3v0083289.2
n.a. PREDICTED: probable pectinesterase/pectinesterase inhibitor 7-like [Glycine max] gi|356570974|ref|XP_003553657.1| chr0 32893415 32896729 +
2 domain predictions
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Lj0g3v0099739.1
n.a. PREDICTED: probable pectinesterase/pectinesterase inhibitor 33-like [Cicer arietinum] gi|502180962|ref|XP_004516727.1| chr0 42320025 42320836 -
2 domain predictions
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Lj0g3v0099889.1
n.a. PREDICTED: LOW QUALITY PROTEIN: probable pectinesterase 53-like [Vitis vinifera] gi|359479965|ref|XP_003632380.1| chr0 42360892 42363435 -
2 domain predictions
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Lj0g3v0125459.1
n.a. PREDICTED: probable pectinesterase/pectinesterase inhibitor 7-like [Glycine max] gi|356570974|ref|XP_003553657.1| chr0 56389692 56392095 -
2 domain predictions
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Lj0g3v0161859.1
n.a. PREDICTED: probable pectinesterase/pectinesterase inhibitor 7-like [Glycine max] gi|356570974|ref|XP_003553657.1| chr0 76215483 76217588 +
2 domain predictions
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Lj0g3v0161879.1
n.a. PREDICTED: probable pectinesterase/pectinesterase inhibitor 40-like [Glycine max] gi|356501892|ref|XP_003519757.1| chr0 76220183 76226189 +
2 domain predictions
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Lj0g3v0188379.1
n.a. PREDICTED: pectinesterase/pectinesterase inhibitor PPE8B-like [Cicer arietinum] gi|502150638|ref|XP_004508051.1| chr0 92023840 92026513 -
2 domain predictions
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Lj0g3v0200679.1
n.a. Pectinesterase [Medicago truncatula] gi|357456165|ref|XP_003598363.1| chr0 98991608 98993968 -
2 domain predictions
 –
Lj0g3v0204259.1
n.a. PREDICTED: probable pectinesterase/pectinesterase inhibitor 33-like [Cicer arietinum] gi|502180962|ref|XP_004516727.1| chr0 101377446 101382747 -
2 domain predictions
 –
Lj0g3v0212839.1
n.a. Pectinesterase [Medicago truncatula] gi|124360330|gb|ABN08343.1| chr0 107400345 107401363 +
2 domain predictions
 –
Lj0g3v0216299.1
n.a. PREDICTED: probable pectinesterase/pectinesterase inhibitor 39-like [Glycine max] gi|356570976|ref|XP_003553658.1| chr0 109830246 109834213 -
2 domain predictions
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Lj0g3v0216319.1
n.a. PREDICTED: probable pectinesterase/pectinesterase inhibitor 41-like [Glycine max] gi|356572750|ref|XP_003554529.1| chr0 109842949 109845276 +
2 domain predictions
 –
Lj0g3v0222439.1
n.a. Pectin methylesterase 31 isoform 1 [Theobroma cacao] gi|508711640|gb|EOY03537.1| chr0 114444431 114449905 +
2 domain predictions
 –
Lj0g3v0284379.1
n.a. PREDICTED: pectinesterase/pectinesterase inhibitor PPE8B-like [Glycine max] gi|356532845|ref|XP_003534980.1| chr0 147549060 147549929 -
2 domain predictions
 –
Lj0g3v0289939.1
n.a. PREDICTED: probable pectinesterase/pectinesterase inhibitor 21-like [Cicer arietinum] gi|502174447|ref|XP_004515520.1| chr0 150535774 150536806 +
2 domain predictions
 –
Lj0g3v0320499.1
n.a. PREDICTED: probable pectinesterase 29-like [Glycine max] gi|356502398|ref|XP_003520006.1| chr0 167261317 167266941 -
2 domain predictions
 –
Lj0g3v0320539.1
n.a. PREDICTED: pectinesterase/pectinesterase inhibitor PPE8B-like [Glycine max] gi|356532845|ref|XP_003534980.1| chr0 167289961 167290824 +
2 domain predictions
 –
Lj0g3v0341889.1
n.a. PREDICTED: probable pectinesterase/pectinesterase inhibitor 41-like [Glycine max] gi|356533561|ref|XP_003535331.1| chr0 179215939 179219502 -
2 domain predictions
 –
Lj1g3v0246840.1
n.a. PREDICTED: probable pectinesterase/pectinesterase inhibitor 12-like [Glycine max] gi|356556434|ref|XP_003546531.1| chr1 2536898 2539505 -
2 domain predictions
 –
Lj1g3v0984180.1
n.a. PREDICTED: probable pectinesterase/pectinesterase inhibitor 34-like [Cicer arietinum] gi|502136316|ref|XP_004502642.1| chr1 12430288 12432990 +
2 domain predictions
 –
Lj1g3v3438940.1
n.a. pectin methylesterase [Sesbania rostrata] gi|20269071|emb|CAD29733.1| chr1 39532293 39536751 +
2 domain predictions
 –
Lj1g3v4830420.1
n.a. PREDICTED: pectinesterase 4-like [Cicer arietinum] gi|502112862|ref|XP_004494467.1| chr1 58405765 58407718 -
2 domain predictions
 –
Lj1g3v4875690.1
n.a. PREDICTED: probable pectinesterase/pectinesterase inhibitor 41-like [Glycine max] gi|356572750|ref|XP_003554529.1| chr1 59195524 59197958 +
2 domain predictions
 –
Lj1g3v4918600.2
n.a. Pectinesterase [Medicago truncatula] gi|357511819|ref|XP_003626198.1| chr1 59655230 59663963 +
2 domain predictions
 –
Lj1g3v4918610.1
n.a. PREDICTED: LOW QUALITY PROTEIN: probable pectinesterase/pectinesterase inhibitor 21-like [Glycine max] gi|356504022|ref|XP_003520798.1| chr1 59666824 59669096 +
2 domain predictions
 –
Lj1g3v5062610.1
n.a. Pectinesterase [Medicago truncatula] gi|357514339|ref|XP_003627458.1| chr1 62190906 62199313 -
2 domain predictions
 –
Lj2g3v0876710.1
n.a. PREDICTED: probable pectinesterase 53-like [Glycine max] gi|356495321|ref|XP_003516527.1| chr2 13461544 13464674 -
2 domain predictions
 –
Lj2g3v1068650.1
n.a. Pectin methylesterase 31 isoform 1 [Theobroma cacao] gi|508711640|gb|EOY03537.1| chr2 17161470 17164709 +
2 domain predictions
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Lj3g3v0797430.1
n.a. Pectinesterase [Medicago truncatula] gi|357456165|ref|XP_003598363.1| chr3 9528204 9531734 +
2 domain predictions
 –
Lj3g3v0797440.1
n.a. PREDICTED: probable pectinesterase/pectinesterase inhibitor 47-like [Glycine max] gi|356517724|ref|XP_003527536.1| chr3 9529684 9537178 -
2 domain predictions
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Lj3g3v1602740.1
n.a. PREDICTED: LOW QUALITY PROTEIN: probable pectinesterase/pectinesterase inhibitor 7-like [Glycine max] gi|356503911|ref|XP_003520743.1| chr3 20265579 20266058 +
2 domain predictions
 –
Lj3g3v1602820.1
n.a. PREDICTED: LOW QUALITY PROTEIN: probable pectinesterase/pectinesterase inhibitor 7-like [Glycine max] gi|356503911|ref|XP_003520743.1| chr3 20282996 20283598 +
2 domain predictions
 –
Lj3g3v2037540.1
n.a. PREDICTED: probable pectinesterase/pectinesterase inhibitor 21-like [Cicer arietinum] gi|502117077|ref|XP_004495691.1| chr3 26054112 26056318 +
2 domain predictions
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Lj3g3v2575530.1
n.a. PREDICTED: pectinesterase 3-like [Cicer arietinum] gi|502156632|ref|XP_004510571.1| chr3 31223784 31226119 +
2 domain predictions
 –
Lj3g3v3188400.1
n.a. PREDICTED: probable pectinesterase/pectinesterase inhibitor 34-like [Cicer arietinum] gi|502124408|ref|XP_004498516.1| chr3 39251853 39255898 -
2 domain predictions
 –
Lj4g3v0398290.1
n.a. PREDICTED: probable pectinesterase/pectinesterase inhibitor 21-like [Cicer arietinum] gi|502117077|ref|XP_004495691.1| chr4 5117884 5119764 +
2 domain predictions
 –
Lj4g3v2215360.1
n.a. PREDICTED: probable pectinesterase/pectinesterase inhibitor 13-like [Glycine max] gi|356564706|ref|XP_003550590.1| chr4 30682981 30684000 -
2 domain predictions
 –
Lj4g3v2215370.1
n.a. PREDICTED: probable pectinesterase/pectinesterase inhibitor 13-like [Glycine max] gi|356564706|ref|XP_003550590.1| chr4 30682981 30684055 -
2 domain predictions
 –
Lj4g3v2215400.1
n.a. PREDICTED: probable pectinesterase/pectinesterase inhibitor 12-like [Glycine max] gi|356556434|ref|XP_003546531.1| chr4 30689308 30691951 -
2 domain predictions
 –
Lj4g3v2215470.1
n.a. PREDICTED: pectinesterase/pectinesterase inhibitor PPE8B-like [Cicer arietinum] gi|502150638|ref|XP_004508051.1| chr4 30710180 30713362 -
2 domain predictions
 –
Lj4g3v2291340.1
n.a. PREDICTED: pectinesterase/pectinesterase inhibitor-like [Cicer arietinum] gi|502150932|ref|XP_004508195.1| chr4 31877738 31879831 +
2 domain predictions
 –
Lj4g3v3099630.1
n.a. PREDICTED: LOW QUALITY PROTEIN: probable pectinesterase/pectinesterase inhibitor 6-like, partial [Glycine max] gi|356511311|ref|XP_003524370.1| chr4 41351075 41354392 -
2 domain predictions
 –
Lj5g3v1548720.1
n.a. PREDICTED: probable pectinesterase/pectinesterase inhibitor VGDH2-like [Glycine max] gi|356499573|ref|XP_003518613.1| chr5 22638306 22640246 -
2 domain predictions
 –
Lj5g3v1548730.1
n.a. PREDICTED: probable pectinesterase/pectinesterase inhibitor 21-like [Glycine max] gi|356533477|ref|XP_003535290.1| chr5 22646343 22648476 -
2 domain predictions
 –
Lj5g3v1604480.1
n.a. Pectinesterase [Medicago truncatula] gi|357442409|ref|XP_003591482.1| chr5 23417959 23420212 +
2 domain predictions
 –
Lj6g3v0485160.1
n.a. PREDICTED: probable pectinesterase 53-like [Glycine max] gi|356523858|ref|XP_003530551.1| chr6 4822407 4826500 -
2 domain predictions
 –
Lj6g3v1138510.1
n.a. PREDICTED: pectinesterase/pectinesterase inhibitor PPE8B-like [Glycine max] gi|356556436|ref|XP_003546532.1| chr6 13955041 13958872 +
2 domain predictions
 –