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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0765200 |
| Transcript ID | LotjaGi1g1v0765200.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Universal stress protein; TAIR: AT2G47710.1 Adenine nucleotide alpha hydrolases-like superfamily protein; Swiss-Prot: sp|Q8LGG8|USPAL_ARATH Universal stress protein A-like protein; TrEMBL-Plants: tr|C6SXR1|C6SXR1_SOYBN Putative uncharacterized protein; Found in the gene: LotjaGi1g1v0765200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:133759273..133763177) extracted from Lotus japonicus Gifu genome v1.2.
GGTTATTCTTTTGCCATAAGATAAGAGATAAGATGGCAAGTAACTTCATTCATTCATTCGATGGAATATGTCAACACTTT TATCGTATTCATTCATTCTCAAGGATTCGTTTGTATTGCAATTAACGCGGGTCCACTCTCCATTTTCCACCAAGTAAGGT CTAGAATGAGGTACAACATAACTAGTCACTTTCAAGGAACCCGATTCAAATGCTTTGGAATACGAATAATTAAATTCAGC ATCAATTGATTTCAAGTGTAGTAGTAATATAGAAGCACACCACAACACAACACAACACTATTTGGTTGAGTAAAGTACCT AAGCTAACTCAACAAAACAATTTAAGAGATTATTTGCATTGCATACATTGGTACTGAAATTAATCAAGTTTCATCGATCA TGGCAAGCTCAACGAAGCAAGTAATGGTGATCGGCGTAGACGATAGTGAGTACAGCACTTATGCCTTGGAATGGACCCTT GATCACTTGGTAGCCCCTCTTCCCAATAATCCCATCTTCAAGATTGTTCTTGTTTATGCCAAGCCTTCTGTTGCTACTAC TGTCGGCTTTGTTGGCCCTGGTATATGTGTAAATTAGAAACATTATATTATCATTTTCTTATGTTACTATATGATTGTTG CTGATGATGATGTTTGATTTTGTGACAATGTTTTAACAGGAATTGGTGAGGTCATCCCTGTTGTGGATGCAGATTTGAAA AGAACTGCTGCCAAAGTGACTGATAGAGCTAAAGAACTCTGCGTCCAGAAATCGGTATAATTCTTCTCTTTCACTATATA TCATATATACTTTTTAACTGTTACTTACCACACTATGAGCATGTCCTTCATAATTGATTCTTGAGTCAGAATCAAGAGAA ACTTATCTGAGTAATTCATGAGTTTTGAAATTGATTTTGAGGAAAGAGAAACTAATCCAAAAAATGTGTTTGATCCAGGG GAAAAAAAGTGAGAGAGAAAAACAAATTCTTTACAATAGAATGAGCATGTCCTTTTTTTTTTGGTCACTTAATGAGCATG TCCTTTATGAATTTTTCTTTTTTTTGTGATATAGGCTCATACTTGTAGGCCGTAGTCCAGGGTATTCACAAGCTAAAAGA AAATACAAAAAAAAAAATGTTGCTTTGTCACATGAAAATCGATCTTATCAATTGTAAAAAAACTCAGACTTTATCAATTG TTTTACAATCCAACCATTGATTCAATTTTTTATTTTTCATTTCTTTAATTATTGAACACATAAAAATCAATGGTAAAATG ATGAATTGGGCAATTGAGAGGATATGTTCCCCTGTCATAAATTACTTCTGTTCATCCTCAAATTTCTATATAACTATGTA TTATTTATTGTGTAATTATGATCTGATGACTAGTTTTTTGATCAGGTAACAGACGTAACGGTGGAAGTGATAGAAGGTGA TGCTAGAAATGTTCTCTGCGATGTTGTGGAGAAGCACCATGCTTCAATATTGGTTGTGGGTAGTCATGGTTATGGGGCTA TCAAAAGGTACAAATGAATTTGCACTGCATTTTTTTATGGCTTAAATACTCTAGGGGTCCCTGAAATTGTACCCCGTATT AAAATAAGTCCCTGAAATTTTTTTTTCCGATTCCGGATCCCTTGAATTGTTTTTTTAATCAGAATAAGTCCCTACGCCGG AGAAGACGGTGGTTGACGACGGCGGTCATGGCGGCGCTACGACCAGGGTGTTGGGCCGGCTTCGTCTCGTCCTCAGGAAC TCAGTGGTGGTGGTCTCGTGGGCTGGGTCGTCACAGTTGAAGAGAAAAGGCCAGTCGCAAGTTGATTTCTTCTCGCCGGA ATTTATGGAGCTTCTCGGTTTCTTCGTTTTAGCTTTGTTTCTTGCGATTTCTTCGCCCAGATCAGATATATGAAGGTCTA GGAGTGTTTTAAACATGTTATTTCATGGTTTGTGGAAACAATGAGGAGGCAACCACTGTCTTCTCCGGCGTAGGGACTTA TTTTGATCAAACAAATTTTTCTAGGGACCCGGAATCGGAAAAAAAAATTTCAGGGACTTATTTTGATACGGGGTACAATT TCAGGGACCTACAGAGTATTTAAGCCTTTTTTTATCAATTAACTGCAAGTTTTGCTTTATGACACTTTCTACATTTATTT ACAGGGCGGTTTTAGGGAGTGTAAGTGACTATTGTGCTCATCATGCTCATTGCACTGTGATGATTGTGAAGAAGCCAAAA ACCAAACACTGATCTCATGGACTGAGATTTTAGTATTTGGTATTAGTACTACAGCAATAAACACAAATTCAGCAGAAGGA AAATTATATGTTTGTCCTATTTGCCAAGCTATATGCTTTATGGTTCATTTCACTTCTTTTTTCTTTCTAAGATGGAACCA TCAAAATAATACATGTAATATGAAGTGACTCTTCTCCGCATAAATGACTCATGTAATCATGGTTTTGTAGTTTGATTCGC CAATTCGAATTTGTCTAATTTGTAGCATAGCTTATCCTTGAAGCCCTACAGTGTGGATAAGTTCTATTTCACTTTTTTTC TTCTATTCTATTCAATTTCAATATAAGGTCTACAACTGCCCAGCAAAAAATCTCGAATTTGCGCCTACCGTGGGTTGTTT TGAAAATGACCCACGGTGGTGCAGTTTTATTGTACCTATGTTAAGACAAAAATAACCTTCATTCTTTAACTTTTTCCATA TTTATCCTTTGCTTAAATTCTTTCTTCTTCATCTGTTACCAGTTACCACCGACAGCACCAAGCCTCAGCACTGCTCTCGC CATCAAAGGAAGCTCGTTCCTCCACCGCTACCCTTTAAAATGTTCTAAGTGTTCATAAAAAACCCATAAAAATGACGACT TTTTTTCCTTCCTCTGAAGACTGTAAGAAGAAAGTTCCTTGCAAGGAAACTGGTGACAAGTGATGCTTGTCTTCCATTAT GACAAGATAATGCAACAGAAACCAAATTAAACTTCCTAAGATGAAGCTATGCAACACCAACCGTTCCAGGAATCTTGTTG CTGAAAACTTGTCTCTTCATATTCAACATCTTTTCCCGTACCAAACCCTCCGTTCTTGTAATTTCTAAGTGTCCAAAAAT CTCCTGCAAAAAACCCCAAAAAGCTTGAACCAAGCCTAGATATGTAACAAAAAAACTCAACCTCATAGCACCCATTAATC CAGATTTGCACCAAGCCCAACCTTCAAACCCAGCCTGAACCCAGATCTGCACCACCCTTCAGAAATCTCCATAGCCATCA AGCACACCTTCTTTCTAGATCGAATCCCAGACATCCAAACCCAGAAAATCCACCATGCAACTCGGCGTCTCAGTTCTCGT CTTCCTCCGACCATGCAATTTCGGATCTGGGTTTTGCTGATGCGATTTTGGATCTGGGTGTTTGGAGGGGTGGCTTTGGG TGGAGGATTTGGTCGTTTGGGTGGCTTTATTGTGGGTGGATGTGATGACCGTGGCTAACTCCATCTCCGGCGAGCTGGAT TTGACGTTGGTGAAGTTCTAGATATGAGTTTTTGGTAGTGTGGCTTTGGGTGGAGATGATGGGTTTGCATGTTGCTTCAA CTTCGGATCTGGGATTTTGGTGGATCCATGGTGGCGGTGCTGGTAGGCTGAGGAAGATTGGCGGGGCAGAGCATAAGTAA AGTTAAATATATTTAATTAATGAATTTTTATTATTATTAGCTGATCTGGACCGTTCAAATTAAAAACATTAAATCTAATG GTGAAAAGTTGAACTGAACCACGGTGGGTCAGTTTGAAACTAACCCACGCTAGGCAAAACCCAATTTAAGTCCTAAACTT TAAAACTTAATTATTTGATCTTTAAGGTTGAATTTTTTGAGACAATTTCTTCTGTAATTTCGGAC
CDS sequence (LotjaGi1g1v0765200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCAAGCTCAACGAAGCAAGTAATGGTGATCGGCGTAGACGATAGTGAGTACAGCACTTATGCCTTGGAATGGACCCT TGATCACTTGGTAGCCCCTCTTCCCAATAATCCCATCTTCAAGATTGTTCTTGTTTATGCCAAGCCTTCTGTTGCTACTA CTGTCGGCTTTGTTGGCCCTGGAATTGGTGAGGTCATCCCTGTTGTGGATGCAGATTTGAAAAGAACTGCTGCCAAAGTG ACTGATAGAGCTAAAGAACTCTGCGTCCAGAAATCGGTAACAGACGTAACGGTGGAAGTGATAGAAGGTGATGCTAGAAA TGTTCTCTGCGATGTTGTGGAGAAGCACCATGCTTCAATATTGGTTGTGGGTAGTCATGGTTATGGGGCTATCAAAAGGG CGGTTTTAGGGAGTGTAAGTGACTATTGTGCTCATCATGCTCATTGCACTGTGATGATTGTGAAGAAGCCAAAAACCAAA CACTGA
Protein sequence (LotjaGi1g1v0765200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MASSTKQVMVIGVDDSEYSTYALEWTLDHLVAPLPNNPIFKIVLVYAKPSVATTVGFVGPGIGEVIPVVDADLKRTAAKV TDRAKELCVQKSVTDVTVEVIEGDARNVLCDVVEKHHASILVVGSHGYGAIKRAVLGSVSDYCAHHAHCTVMIVKKPKTK H
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 1 | 161 | 161 | 9.0E-40 | ||
| PANTHER | 3 | 161 | 159 | 5.6E-88 | – | |
| PANTHER | 3 | 161 | 159 | 5.6E-88 | – | |
| PRINTS | 6 | 24 | 19 | 3.6E-14 | ||
| Pfam | 8 | 155 | 148 | 8.0E-27 | ||
| CDD | 9 | 154 | 146 | 1.59334E-22 | – | |
| SUPERFAMILY | 10 | 157 | 148 | 1.0E-31 | – | |
| PRINTS | 115 | 127 | 13 | 3.6E-14 | ||
| PRINTS | 133 | 155 | 23 | 3.6E-14 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0765200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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