Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0768100 |
| Transcript ID | LotjaGi1g1v0768100.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | BTB/POZ domain-containing protein family; TAIR: AT1G03010.1 Phototropic-responsive NPH3 family protein; Swiss-Prot: sp|Q9SA69|Y1301_ARATH BTB/POZ domain-containing protein At1g03010; TrEMBL-Plants: tr|E9NZU3|E9NZU3_PHAVU NPH3 family protein; Found in the gene: LotjaGi1g1v0768100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:134079276..134084158) extracted from Lotus japonicus Gifu genome v1.2.
ATTTTCTGAAACAAAAATCATATAAAGTAAAGCAAATACCACTCATTCACTTTATACTTTTCACCGAAAAGTGCAAGCAC ACCTGCGTTTACTTTGATTTTAGATCAAGTACTATATCATGAAGAATGTTTTCAAGTCATCACCATCATTTAGCATGCAA TGGTTTCATGTGACTTTCACTTAAATTCTCCACTGACACCTCAAGAATTAAGTGCTCCTCAACAACACAGAATCTGTCAC AAGAACGAGACACAGTCGATTTAACTGACATTGATTAGTCCTTCACATTGTTAACAAGGTCACATAACTGGCAGAGTAAC AATTGCAACGTTTGGTGGAGATCATGGGAGTTGTAACTCTTGGTGAATTGAAGCCTAGCATTTCTGGGAGAAGAACATTT CGTCCAAGTTCAAGCATAAGACATGCCACTGAATGGTAATCTTCTAATTTTATGATGTTTTGCTGCATCAGTGTTGATTG CAATGGAGATATAGTTGTAACATTTGACTGCAATGTCTTTGTAATTTAGTGTTTTTTTTGTCCTGAGCTATTTCTTTCTC ATTGAATTCTGAGGGGTGAGTTTTTATTAATGAAAATTAGTTAATTCTTGGTGAACTGAAGCCTTGCATTTCGAGTGTAT GTTTGTGTTGGCTCAAACGTAAACATGATTTCTAGTATCTCAACGTGCCAATGGAGAAACTAGAATTCACCATGTTGAGT TCAATGCGGATCAAAGAAGCTAGATTTTGCCACGTTGAGTTCAACGGAAATTCCAACACACTTAATTCTCCTTTGCCTTG CCAATGTGTCGGTGCATCTCATGAGTATTACTTGAATGAATTTTCCAAAAAAAAATCATCTTAGTCACAGCCTATCCAAA ATTATGGCAGAAAAAAACACTTTCAGCATTCATGGATCACGGGAAAGGTTAAACTCTGAGATTGGTAGATGTAGTCCTTT GACATCTGACAACAATATGGGGCAACATGGTGAATGTTCAGATCTCATCTATCAGCAATGTGAACAACCATTAATGTTTG TCTTTAAATTATTCCTGTGCTTTTATTACATATAGACCCTCAATAAGTGTAGCAACATATCAACATCTTCTATCCCCAAA TTGTGTTTCGTTTGTTTGTTCCCCCAATGAATTTTTGACAAATTAGCAAAAAGGGTAATTCGTCTGTAAAATCTTGACAA TTGTGCAAAAAAGGGTACTCATGTAAATTTATAACTACCTCATCCATGTCTCTTTAAACTCCATGGCAAAATCTCATTAG TGAGACAGGAAAATAAGATAAAATGAGACAGAAGATCTGCATCCAATGAGAGCTCACCGACTGGGAAATATTTTTGGCAG CACATAAAACATGACAGGCATAAAATTAGCTTAACCATGCTAGAGTGGTTCCAATGGTTTCCTCTTCTTATCTATGTTGG TCAATTATTTGCATTCATGTGTTTCTCTAATAGTGACATAACCAACCGTATTCAGTATTTATTTGATTTGGGGCCACTCC CATTTAAGATCTTGATCTTTCAAGATTTAGCTGTCTTCTAGTTTGTGGTGTACAAAGCACATAGACTGAGTTAGTACCAT TAGGTTCATAAAATTGAAAATGCATACTAGAGGAGGCTTCTCATAATTTCATTTTGGTAATATATGAATGCCTCAAGTTT TTGCTTTTCATTAGAGTTTCCATGTCTATTTCATATGATAATGATTCAACCAGACTTGCTTTTGCAGGCCAATTTCTGAT GTCTCTAGTGATCTCACCATAGAAGTAGGAGCTTCAAACTTTGCACTTCATAAGGTAAAGAAACAAGCTACAATTCTGAT GATAGGTTAAATATTCAGCATGGTTTTCTTCACTTGACATTCTTATATGTGAATGAATAGTTGGATATACAAGTTTGTTA TCAAATGTACATAATTATCCAATTTTATTTTTAACATTGATTAATATATGCATCTTTAGCAACTTTGAAGAGAATTTCAT GCCTAATATAGTCAGAATCAATTCTGGGAAGAAACTTCTGCGAGTTGCTTCTAGCTGTCAGAATTGATTCTGAGAAGAAA GAAACCGATAGAAACATGCTCTTAGTCCACTAGACATGAGTTCTTAACAATAGCTTCTTTTTCACTATGAACTCAAAGTC TACAATTCTTTCCCCAGTTTCCTCTTGTTTCTAGGAGTGGAAGAATTCGGAAGTTACTCTCAGAAGCAAAAGTTTTGCGC GTAAGTCTCCAAAATGTGCCAGGTGGTGCAGAGGCGTTTGAGCTAGCTGCCAAATTCTGCTATGGAATCAACATTGACTT CACCCTCTCAAATGTTGCTATGCTACGTTGCACATCCCATTATCTTGAAATGACAGAAGAATTTGCAGAAAAAAACTTGG AAACCAGAGTTGAAGCATATCTAAAGGAGACAGTGCTCCCAAACACATCAAGCACAATTTCTGTTCTTCATAGTTGTGAG ACTCTTCTTCCCATATCAGAAGAAATCAACCTTGTCAACAGGCTAATCAATGCGATTGCAAATAACGCTTGCAAAGAGCA ACTTACTTCTGGCTTGCAAAAACTTGACCACACTTTCCCTTCTAAAACCACATCAACCATGGAACCAGAAACACCCTCTT GGGGAAAGTCTTTCAATGTTCTCAACCTTGATTTCTTCCAAAGAGTTGTATCTGTTATGAAGTCAAAAGGGTTGAAACAA GACATGATCAGCAAAATTTTGATAAACTATGCTCAAAATTCTCTTCAAGGGATTTGTGTTAGGGACCCCAATGTGGTAAA AGGAAGTGCACTTGACATGGAGTTGCAGAAGAAACAAAGGGTCAGTGTTGAAGCTATAGTTGGTTTACTCCCAACTCAAT CAAGGAAGAGTTCAGTTCCAATGGCATTTCTCTCTTGTCTATTAAAAGCTGCAATAGCAACATCAGCATCAACTCCTTGT AGATGTGATTTAGAGAGGCGAATCGGTCTGCAACTTGACCAGGCAATACTTGAAGACATTCTAATTCCAACAAATTCACC TCAAAATTCCCACAGCACAATGTATGATACAGATTCCATTTTGAGGATCTTTTCTACTTTTCTAAACTTGGATGATGATG ATGATGAGGACAATGATGATGAAGATAGTCACTTCAGAGATGAAAGCCAAATGATGTATGAGTATGGCTTTGAGAGTCCT GGATCTCCAAAACAAAGCTCAATTCTCAAGGTGTCAAAGTTATTGGACAACTATCTTGCTGAAGTAGCACTGGACTTGAA CTTGTTACCATCAAAATTCATAGCCCTTGTGGAGCTACTTCCAGATCATGCACGTGTTGTCAGTGATGGACTCTATAGAG CTGTTGATATCTTTCTTAAGGTGAGAATTCCCTTGCAAGTTTACTCAAGCTAAGAGTTATAACCTCTAACCAAAAGTGAT TCTAGAATATTTCACAGCGAAACCAAACACGCTATAGTTAGAACTAAGATATAGTGTGTGTTTTTTATTAGCGTTGTTAG AATTGATTTTGAATAAAATTGCTTTCGGTAAAAGTGATTTGAGAGTGAAGTTATTTATACTTGCATACATTTATGGAAAA AGTGATTTCTATAGGGTGATATTGTGATTTCTAGTTATGAAATTAGACAATTGATTATGTGCATGTTTGATAGTGCATGT TGGTATACATGGTGGAAAACTACAACGAAGCTAAAATCAGAAGCAACTTCTCTTAGCTTTTGCGACTGTCCACTATGATT TTAGCATGACCGTGGTTTTCCATCCTATATCCAAATATGCACTATATCCACGGCATAAGCTACTCTGCCTACCTTGTGTT CATAATTGACTTTGGAACTAAAATTAATTCTGCCAAACATCAGTATGCTCTATCACTGTTGATTCAAGATATCAATGACA GTCGTTAACTGTTGTTTACTTATGATGGAGGTTCATCCAAACATGAAGGACTCAGATAGGTATCGCCTATGCAAAACCAT AGATTGTCAGAAACTGTCTCAAGAAGCATGCAATCATGCAGCACAAAATGAAAGGCTACCAATGCAGATTCTGGTTCAAG TTCTTTACTTTGAGCAAATCAGGCTCCGCAATGCCATGAATGGAGAAGGAGGACACAGTAATCAGATCTTCTTTGGTGGT GGGTTTCAGGGTAATCAACAATTCCCTCAACGTTCAGGAAGTGGTGTAGGAAGTGGAGCCATTTCGCCAAGAGATAATTA TGCCTCGGTGAGAAGAGAGAACAGAGAGCTGAAGCTTGAGGTTTCAAGAATGAGAATGAGGCTCACTGACTTGGAGAAAG ACCATGTTTCCATAAAGCAGGAGTTTGTGAAGCCCCACACTGCTAACAGGCTCTTCAAAGCGTTCACCAGAAAGCTAAGC AAGCTCAATAATGCTCTGTTCCGGAGAAAGAGTGTTGGTAATGGTGGCAGAGAAAGAGAACATAATAGTCCACAGCAAAC TCGGTTCCCTTTTCCAAAGCGAAGGTGCCACTCAGTTTCATAAATGGCCAACCTGGTGTTATAAAGCTCACACTATGTTC GAACACATGATAGCAACCTTACCAATGCGACGAGCCTAGTTTTATAAATGTGTAAAATATATGACACAATGTATATTATT CAGCATGCATAAACATGATAATGCATGGCGTGAATATGTCTATATTTTCCACTCCACGGTTTTTAGAGTGCTGATATGAT ATCAATGCCCTATTGAACTGTTCAAAAGATTGAAATGTTCTATTTAATTTTTTGCATGGAAAGAATTGTTCCTATTCAAA TTTGAGAGTGGGATGCTCAATTAAACAACTATCATCCTCTGAATCAGCCTTTTATTGATATAGTAGATAGGGCTAGACAC TTT
CDS sequence (LotjaGi1g1v0768100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGAGTTGTAACTCTTGGTGAATTGAAGCCTAGCATTTCTGGGAGAAGAACATTTCGTCCAAGTTCAAGCATAAGACA TGCCACTGAATGGCCAATTTCTGATGTCTCTAGTGATCTCACCATAGAAGTAGGAGCTTCAAACTTTGCACTTCATAAGT TTCCTCTTGTTTCTAGGAGTGGAAGAATTCGGAAGTTACTCTCAGAAGCAAAAGTTTTGCGCGTAAGTCTCCAAAATGTG CCAGGTGGTGCAGAGGCGTTTGAGCTAGCTGCCAAATTCTGCTATGGAATCAACATTGACTTCACCCTCTCAAATGTTGC TATGCTACGTTGCACATCCCATTATCTTGAAATGACAGAAGAATTTGCAGAAAAAAACTTGGAAACCAGAGTTGAAGCAT ATCTAAAGGAGACAGTGCTCCCAAACACATCAAGCACAATTTCTGTTCTTCATAGTTGTGAGACTCTTCTTCCCATATCA GAAGAAATCAACCTTGTCAACAGGCTAATCAATGCGATTGCAAATAACGCTTGCAAAGAGCAACTTACTTCTGGCTTGCA AAAACTTGACCACACTTTCCCTTCTAAAACCACATCAACCATGGAACCAGAAACACCCTCTTGGGGAAAGTCTTTCAATG TTCTCAACCTTGATTTCTTCCAAAGAGTTGTATCTGTTATGAAGTCAAAAGGGTTGAAACAAGACATGATCAGCAAAATT TTGATAAACTATGCTCAAAATTCTCTTCAAGGGATTTGTGTTAGGGACCCCAATGTGGTAAAAGGAAGTGCACTTGACAT GGAGTTGCAGAAGAAACAAAGGGTCAGTGTTGAAGCTATAGTTGGTTTACTCCCAACTCAATCAAGGAAGAGTTCAGTTC CAATGGCATTTCTCTCTTGTCTATTAAAAGCTGCAATAGCAACATCAGCATCAACTCCTTGTAGATGTGATTTAGAGAGG CGAATCGGTCTGCAACTTGACCAGGCAATACTTGAAGACATTCTAATTCCAACAAATTCACCTCAAAATTCCCACAGCAC AATGTATGATACAGATTCCATTTTGAGGATCTTTTCTACTTTTCTAAACTTGGATGATGATGATGATGAGGACAATGATG ATGAAGATAGTCACTTCAGAGATGAAAGCCAAATGATGTATGAGTATGGCTTTGAGAGTCCTGGATCTCCAAAACAAAGC TCAATTCTCAAGGTGTCAAAGTTATTGGACAACTATCTTGCTGAAGTAGCACTGGACTTGAACTTGTTACCATCAAAATT CATAGCCCTTGTGGAGCTACTTCCAGATCATGCACGTGTTGTCAGTGATGGACTCTATAGAGCTGTTGATATCTTTCTTA AGGTTCATCCAAACATGAAGGACTCAGATAGGTATCGCCTATGCAAAACCATAGATTGTCAGAAACTGTCTCAAGAAGCA TGCAATCATGCAGCACAAAATGAAAGGCTACCAATGCAGATTCTGGTTCAAGTTCTTTACTTTGAGCAAATCAGGCTCCG CAATGCCATGAATGGAGAAGGAGGACACAGTAATCAGATCTTCTTTGGTGGTGGGTTTCAGGGTAATCAACAATTCCCTC AACGTTCAGGAAGTGGTGTAGGAAGTGGAGCCATTTCGCCAAGAGATAATTATGCCTCGGTGAGAAGAGAGAACAGAGAG CTGAAGCTTGAGGTTTCAAGAATGAGAATGAGGCTCACTGACTTGGAGAAAGACCATGTTTCCATAAAGCAGGAGTTTGT GAAGCCCCACACTGCTAACAGGCTCTTCAAAGCGTTCACCAGAAAGCTAAGCAAGCTCAATAATGCTCTGTTCCGGAGAA AGAGTGTTGGTAATGGTGGCAGAGAAAGAGAACATAATAGTCCACAGCAAACTCGGTTCCCTTTTCCAAAGCGAAGGTGC CACTCAGTTTCATAA
Protein sequence (LotjaGi1g1v0768100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGVVTLGELKPSISGRRTFRPSSSIRHATEWPISDVSSDLTIEVGASNFALHKFPLVSRSGRIRKLLSEAKVLRVSLQNV PGGAEAFELAAKFCYGINIDFTLSNVAMLRCTSHYLEMTEEFAEKNLETRVEAYLKETVLPNTSSTISVLHSCETLLPIS EEINLVNRLINAIANNACKEQLTSGLQKLDHTFPSKTTSTMEPETPSWGKSFNVLNLDFFQRVVSVMKSKGLKQDMISKI LINYAQNSLQGICVRDPNVVKGSALDMELQKKQRVSVEAIVGLLPTQSRKSSVPMAFLSCLLKAAIATSASTPCRCDLER RIGLQLDQAILEDILIPTNSPQNSHSTMYDTDSILRIFSTFLNLDDDDDEDNDDEDSHFRDESQMMYEYGFESPGSPKQS SILKVSKLLDNYLAEVALDLNLLPSKFIALVELLPDHARVVSDGLYRAVDIFLKVHPNMKDSDRYRLCKTIDCQKLSQEA CNHAAQNERLPMQILVQVLYFEQIRLRNAMNGEGGHSNQIFFGGGFQGNQQFPQRSGSGVGSGAISPRDNYASVRRENRE LKLEVSRMRMRLTDLEKDHVSIKQEFVKPHTANRLFKAFTRKLSKLNNALFRRKSVGNGGREREHNSPQQTRFPFPKRRC HSVS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 3 | 619 | 617 | 0.0 | – | |
| PANTHER | 3 | 619 | 617 | 0.0 | ||
| SUPERFAMILY | 22 | 120 | 99 | 2.28E-13 | ||
| CDD | 33 | 127 | 95 | 1.68957E-31 | – | |
| Gene3D | 33 | 180 | 148 | 4.6E-8 | – | |
| ProSiteProfiles | 38 | 103 | 66 | 9.02 | ||
| ProSiteProfiles | 206 | 505 | 300 | 82.022 | ||
| Pfam | 208 | 481 | 274 | 1.5E-83 | ||
| Coils | 551 | 578 | 28 | - | – | |
| MobiDBLite | 614 | 644 | 31 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi1g1v0768100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…