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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0785600 |
| Transcript ID | LotjaGi1g1v0785600.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | protein kinase family protein; TAIR: AT3G04530.1 phosphoenolpyruvate carboxylase kinase 2; Swiss-Prot: sp|Q93VK0|PPCK2_ARATH Phosphoenolpyruvate carboxylase kinase 2; TrEMBL-Plants: tr|A0A0L9THI9|A0A0L9THI9_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0785600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:135812129..135813944) extracted from Lotus japonicus Gifu genome v1.2.
GTCACTGTATTCTGCTATTACATTCAAAGCAGAATGGGTGGTGAAGAAGAAGCTCTGGAGAAGAAACACTACCAACCCAT GGAGGAGCTTGGCCGAGGCAAATTTGGCACCGTCTTCCGGTGCTTCCACCAGGAATCAAACAAATCCTACGCCGTCAAAG TCATCAACAAGAACCTCCTCACCGGTTCCACAGACCGCCAGTGCCTTGAAAGCGAGTCCAAATTCATGACCTTCCTCTCA CCGCACCCTAATATTCTTCAAATCTTTGAAACCTTTGAAGACGCCGATTACCTCTGCATGGTCCTCGAGCTTTGCGGCCC CCACGCCCTCATCGACAAGCTTCCATTGCCGGAGCCGGAGGCATGCTCCGTCATGAAGAGCCTTCTGGAAGCGCTGGCGC ACTGCCACCGCCTCGGAATCGCACACCGTGACGTGAAACCGGACAACATCCTGTTTGATGAGTCGGGAAACCTTAAGGTT GCGGACTTTGGCTTTGCTGAGTGGTGCGGCGAGGGGAGGAGCATGAGCGGGGTGGTGGGCACGCCGTATTACGTGGCGCC GGAGGTGGTGATGAGGAAGGAGTACACTGAGAAAGTGGATGTTTGGAGCGCTGGCGTGGTTCTTTACGCAATGCTGTCCG GAATTCCGCCGTTTGACGGAGACTCTCCGGAGGATATTTTTGCGGCTGTGGCGAGGGCCAATCTCAGGTTTCCGACGAGT ATTTTCAGCTCTGTTTCGGCACCTGCTAAGGATCTCCTCAGGAAGATGATTTGTCGAGATCCTTCAAGAAGAATTTCTGC AGAACAAGCCTTGAGTAAGTTTCTTTATGTTTATGTTTGTTTAGTGAATCCTTCAATTCATAGCATTCTTGGTTCATAGT TATTTTGTTTTTGTTTTTGATTATGTTTGTTTAGTGAATCCTTGATAGTATTCTTGGTTCATGTTTTATAACTGTTTGAT TAATTAATTAATTAATTATTCACCATCAAAATTAACTTTTGGGTAAAAGATTATGTGCATGAATACAAAATATATGAAAA ATTAGGGGTTGTCTAAATGACCCATGATAAAGTTTGGGTTAAATAACTCATCATCCAATCACATTGGAGATAGGTGAGTT GGAATTTCCATATTTTATTTATTAATTTATTTCCAACTCATTTATCTCCAATGTGATTGGATGATGAGTTATTTAACCCA AACTTTATCATGGGTCATTTAGACAACCCCGAAAAATTATAGTGAGTTATAATTACAATGGGTAGAATTAAGAAGCATCA TAGCTTCACTATTACGTTATGAATGTAGTCTCCTGCAATTGATTCTAGATTAAAAATCAATTCTATCAATTTTATGAAGA ACTGTGAAATTTCATCATATTGTCTTGTATAAATTAAATCACTTTTCTTTGAATATAATTCACTGTCAATCATGCACTTT TATTGTTATCAATTATCAAGATCAATTCTATCCACAATTATAATACTCATCCAAACATGGACTATTGACTTATAGCTAGT ATATTCTTGAGCTTTGAGTCAAACTTTATGTTATATATGGGGATTTCAAGTTTATAATATGAATTAATTTTGGCACATCA CTTTTATTTTACAGTAGGATTTCCTGTGTTTGTGTATTAATGTGTGCTTAATCTGTAATTTGCAGGGCATCCATGGATCT TGAGTGGAGGTGTGATTAATCAGTGATCTGCATGTGTTGAAGATTGCTGCAGCAAAGTATCCACCAACAAGTGATCCCTT GGATGGTTCTGGATTTTTATGTTTCTTTAATTTCTCATCACTTCCTTGTAGTTTTT
CDS sequence (LotjaGi1g1v0785600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGTGGTGAAGAAGAAGCTCTGGAGAAGAAACACTACCAACCCATGGAGGAGCTTGGCCGAGGCAAATTTGGCACCGT CTTCCGGTGCTTCCACCAGGAATCAAACAAATCCTACGCCGTCAAAGTCATCAACAAGAACCTCCTCACCGGTTCCACAG ACCGCCAGTGCCTTGAAAGCGAGTCCAAATTCATGACCTTCCTCTCACCGCACCCTAATATTCTTCAAATCTTTGAAACC TTTGAAGACGCCGATTACCTCTGCATGGTCCTCGAGCTTTGCGGCCCCCACGCCCTCATCGACAAGCTTCCATTGCCGGA GCCGGAGGCATGCTCCGTCATGAAGAGCCTTCTGGAAGCGCTGGCGCACTGCCACCGCCTCGGAATCGCACACCGTGACG TGAAACCGGACAACATCCTGTTTGATGAGTCGGGAAACCTTAAGGTTGCGGACTTTGGCTTTGCTGAGTGGTGCGGCGAG GGGAGGAGCATGAGCGGGGTGGTGGGCACGCCGTATTACGTGGCGCCGGAGGTGGTGATGAGGAAGGAGTACACTGAGAA AGTGGATGTTTGGAGCGCTGGCGTGGTTCTTTACGCAATGCTGTCCGGAATTCCGCCGTTTGACGGAGACTCTCCGGAGG ATATTTTTGCGGCTGTGGCGAGGGCCAATCTCAGGTTTCCGACGAGTATTTTCAGCTCTGTTTCGGCACCTGCTAAGGAT CTCCTCAGGAAGATGATTTGTCGAGATCCTTCAAGAAGAATTTCTGCAGAACAAGCCTTGAGGCATCCATGGATCTTGAG TGGAGGTGTGATTAATCAGTGA
Protein sequence (LotjaGi1g1v0785600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGGEEEALEKKHYQPMEELGRGKFGTVFRCFHQESNKSYAVKVINKNLLTGSTDRQCLESESKFMTFLSPHPNILQIFET FEDADYLCMVLELCGPHALIDKLPLPEPEACSVMKSLLEALAHCHRLGIAHRDVKPDNILFDESGNLKVADFGFAEWCGE GRSMSGVVGTPYYVAPEVVMRKEYTEKVDVWSAGVVLYAMLSGIPPFDGDSPEDIFAAVARANLRFPTSIFSSVSAPAKD LLRKMICRDPSRRISAEQALRHPWILSGGVINQ
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 4 | 95 | 92 | 6.8E-24 | – | |
| PANTHER | 10 | 268 | 259 | 3.7E-118 | – | |
| PANTHER | 10 | 268 | 259 | 3.7E-118 | – | |
| SUPERFAMILY | 11 | 267 | 257 | 2.02E-88 | ||
| CDD | 12 | 264 | 253 | 1.17636E-119 | – | |
| Pfam | 13 | 265 | 253 | 7.9E-73 | ||
| ProSiteProfiles | 13 | 265 | 253 | 49.94 | ||
| SMART | 13 | 265 | 253 | 7.2E-93 | ||
| ProSitePatterns | 19 | 42 | 24 | - | ||
| Gene3D | 98 | 270 | 173 | 1.9E-65 | – | |
| ProSitePatterns | 129 | 141 | 13 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi1g1v0785600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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