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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0790400 |
| Transcript ID | LotjaGi1g1v0790400.2 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Indole-3-acetic acid-amido synthetase GH3.3, putative; TAIR: AT2G46370.1 Auxin-responsive GH3 family protein; Swiss-Prot: sp|Q6I581|GH35_ORYSJ Jasmonic acid-amido synthetase JAR1; TrEMBL-Plants: tr|A0A151TXX1|A0A151TXX1_CAJCA Putative indole-3-acetic acid-amido synthetase GH3.5; Found in the gene: LotjaGi1g1v0790400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:136219027..136222115) extracted from Lotus japonicus Gifu genome v1.2.
CTCAGTCTGAATTGACCGTGACCCCACATCTATTTGAAAATTTGGAACACTTACCAATAATGGTTTGTAGAAATTAGCAC ACGCCGGTCACTAGTCACTACTCACCCTTTGTTTTGTCCTATTCTATGTATAATACAATGCTTCATCTTTTTTTCTCCCT TTGAATAGGTGAAGTGGTGAAAATGTTGGAGAAAGTGGGAGAGTTTTATAACATGGACAAGGTTATAGAAGAATTTGAGT CACTCACAAAGGATGCAGGAAAGGTTCAGAGAGAAACTCTCAAGAGAATTTTGGAGGATAATGCATCAGCTGAGTATTTG CAGAATTTGGGCCTTAATGGGAGAACTGACCCTGATAGTTTCAAGGCCTGTGTTCCCATGGTTACACACAAAGATTTGGA ACCTTATATCTACAAAATCATTGATGGCGAATCTTCTTCTATTCTCACTGGAAAACCCATCACAACTATGTCTTTAAGGT GTTGTTTTTCGCTTGTTTTTTTTATTCTTTTCTTCATCTTATAGCATGCTCAAAATCAATTCTGGTACTAAGTATTTTCA AAGTTTCTAAGTCTAAGAATGATATTTCTTGCTGCAGCTCTGGCACTACTCAGGGGAAGCCAAAGTATCTCCCATGGAAT GATGAGTTGTTTGAAACCACCATGCAGATTTATAAGACCTCTTTTGCCTATAGGAACAGGTAATCCAGAATACTTCATTT CCTAAACTTGTTTTCAAGTTTTAAGATGATTGATTCTACAGTGAAATGCTCTAGAATCACTTTTGGTTCAAACTCAAGCG CACATACTTAATTAGCAGGCATTCGGGCTGAAAACTTATAAATACGGCGCTAAGGCCTATGAGCATAAAAGGATACACTC GGACACCATTTTTGACAACTAGCATTCTAGCTCAAAAACTTATGGCACTAGGGTCTAAAAACTTACTAGGCAGTCATCAG GGCCCAAAAACTTATAAATATAGCGCGTAAGCCTATAAGTTTTAGCTTCTGAGTAAACATGTCTTAGATTATGTGCAAAT CGTGACACTAAAAACATGTTTTAAATTGTTATTTTGTCTTGTTCCTTCTTCTGCAGAGAGTTTCCTATGAAAAATGGGAA GGCTTTAAGCTTTATCTATGGTAGCAAACAGTTCAAAACAAAAGGGGGTCTGGTAGCAAGAACTGCTACAAGCAATTTGT TTCGCAGTCCGGGTTACAAGCATGCAATGAAGGCATTGCAATCTCAATGCTGCAGCCCAGATGAAGTGGTATTTGGTCCT GATTTTTTCCAATCCTTATACTGCCACTTGCTATGCGGCCTCATTTTCCGCGAGGAAGTTCAATTAGTGTCTTCTACATT TGCTCATAGCATCGTCCATGCTTTCAGAACCTTTGAACAAGTGTGGGAAGAGCTCTGCACTGATATCAGAGAAGGGGTTC TCACAAGCAGAGTTACAGTGCCATCTATTAGAATGGCCATGTCTAAAATACTCAAACCAAATCCAGAACTAGCAAACTTG ATTCACAAGGAATGTGTTGGGTTGAGCTATTGCAACTGGTATGGTTTGATACCAGAGCTTTTTCCCAATGCAAAGTACAT TTATGGCATCATGACAGGGTCAATGGAGCCATATTTGAAGAAACTGAGGCACTATGCAGGGGAGATGCTGCCTTTGTTGA CTGCTGATTATGGATCTACTGAAGGTTGGATTGCTGCAAATGTGAACCCAAAACTTCCACCTGAAATGGCTACTTATGCT GTGTTGCCCCATATTGGTTACTTTGAGTTCATTCCATTGACAGAGCTAGAGAATGATTTTTTCCTTTGCATTGATCCAAA TCCAGTAGGACTCACTGAAGTCAAGATAGGTGAAGAGTATGAAATTGTTATGACCAATCCAGCAGGTACTTAATTACATT GATTACTACTACTATCAAGTGGAATACTTTATTTTTTCAACATGGATCCTTGCAGCTCCATGTTTCAAATTCTTTACCAT TAATTCTTATAATAAATGGTTCTAATAAATCTAAATCAGTAAAAAAATTAAATTGGTCAAAAGTTTTTAGCACATGTCAT TTGCTGTTGCAGAAAGACAGCATGAGTTTTTCCCCACTTTGCATTAATGGATTTGGACTAAGGACTAAAGTTACTTGCTT CTTTCATATTGACCAGTTGAGTTCTGTCCAGTAGGAAAAGAAATGTTTGTTTTCCATATAAAACTTCTAATATGCCTCAT GTGGCCACGTGAAAGAATTTTATGTGACATAATAATAAGCATAAATTGATATATTAAGGCAACAAATTCTTTTGACATCA ATATGTAGGGATATGTAGGATTTTATATTTGCAATCAACATTACAAAGATTTTTGCACGTGGGCTTATAGTTTAGTGATG TTACCATCATGATTTGTGTAGTTGCATCATAAGCAGATAAAAAAATGTCGCATGCACCCAGAGCATAGTCCTTCACTTTA GTTGTTCCAAACTAATTAATCATCACGAAATAGAAACTGATCCAAACATGCATGTTACAAATTGCAGGTTTGTACCGGTA TAGGCTAGGAGATGTGGTAAAGGTGATGGGGTTCCATAACTCGACTCCGGAACTCAAATTTGTTCGCCGGAGCAGCCTTC TGTTGAACATTAACATTGACAAGAACACTGAGAAGGATTTGCAGCTAGCTGTGGAAGCAGCTGCCAAATTTTTAGCAGAG GAGAGAGTGGAAGTTGTTGACTTCACTAGCCATGTTGATTTAACCACAGAACCAGGTCACTATGTAATTTTCTGGGAAAT CAGTGGTGAAGCAAGTGAAAAACTACTCAGTGAATGCTGCAATTGTTTAGACAAGTCTTTCATTGATGCGGGCTACACTA GTTCTCGCAAAGTTAACTGCATTGGGCCCCTTGAACTCCGAGTTGTTAGGAGGGGAACATTCCAGAAGGTTCTTGATCAT TACCTTGGATTAGGAACCGCTGTTAGTCAGTACAAGACACCAAGATGTGTTGGTTCTTCAAACAGCAGAGTGTTGCAAAT CTTGTGTGACAATGTTGTTAAGAACTATCTCAGTACTGCTTTCAATTGA
CDS sequence (LotjaGi1g1v0790400.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTGGAGAAAGTGGGAGAGTTTTATAACATGGACAAGGTTATAGAAGAATTTGAGTCACTCACAAAGGATGCAGGAAA GGTTCAGAGAGAAACTCTCAAGAGAATTTTGGAGGATAATGCATCAGCTGAGTATTTGCAGAATTTGGGCCTTAATGGGA GAACTGACCCTGATAGTTTCAAGGCCTGTGTTCCCATGGTTACACACAAAGATTTGGAACCTTATATCTACAAAATCATT GATGGCGAATCTTCTTCTATTCTCACTGGAAAACCCATCACAACTATGTCTTTAAGCTCTGGCACTACTCAGGGGAAGCC AAAGTATCTCCCATGGAATGATGAGTTGTTTGAAACCACCATGCAGATTTATAAGACCTCTTTTGCCTATAGGAACAGAG AGTTTCCTATGAAAAATGGGAAGGCTTTAAGCTTTATCTATGGTAGCAAACAGTTCAAAACAAAAGGGGGTCTGGTAGCA AGAACTGCTACAAGCAATTTGTTTCGCAGTCCGGGTTACAAGCATGCAATGAAGGCATTGCAATCTCAATGCTGCAGCCC AGATGAAGTGGTATTTGGTCCTGATTTTTTCCAATCCTTATACTGCCACTTGCTATGCGGCCTCATTTTCCGCGAGGAAG TTCAATTAGTGTCTTCTACATTTGCTCATAGCATCGTCCATGCTTTCAGAACCTTTGAACAAGTGTGGGAAGAGCTCTGC ACTGATATCAGAGAAGGGGTTCTCACAAGCAGAGTTACAGTGCCATCTATTAGAATGGCCATGTCTAAAATACTCAAACC AAATCCAGAACTAGCAAACTTGATTCACAAGGAATGTGTTGGGTTGAGCTATTGCAACTGGTATGGTTTGATACCAGAGC TTTTTCCCAATGCAAAGTACATTTATGGCATCATGACAGGGTCAATGGAGCCATATTTGAAGAAACTGAGGCACTATGCA GGGGAGATGCTGCCTTTGTTGACTGCTGATTATGGATCTACTGAAGGTTGGATTGCTGCAAATGTGAACCCAAAACTTCC ACCTGAAATGGCTACTTATGCTGTGTTGCCCCATATTGGTTACTTTGAGTTCATTCCATTGACAGAGCTAGAGAATGATT TTTTCCTTTGCATTGATCCAAATCCAGTAGGACTCACTGAAGTCAAGATAGGTGAAGAGTATGAAATTGTTATGACCAAT CCAGCAGGTTTGTACCGGTATAGGCTAGGAGATGTGGTAAAGGTGATGGGGTTCCATAACTCGACTCCGGAACTCAAATT TGTTCGCCGGAGCAGCCTTCTGTTGAACATTAACATTGACAAGAACACTGAGAAGGATTTGCAGCTAGCTGTGGAAGCAG CTGCCAAATTTTTAGCAGAGGAGAGAGTGGAAGTTGTTGACTTCACTAGCCATGTTGATTTAACCACAGAACCAGGTCAC TATGTAATTTTCTGGGAAATCAGTGGTGAAGCAAGTGAAAAACTACTCAGTGAATGCTGCAATTGTTTAGACAAGTCTTT CATTGATGCGGGCTACACTAGTTCTCGCAAAGTTAACTGCATTGGGCCCCTTGAACTCCGAGTTGTTAGGAGGGGAACAT TCCAGAAGGTTCTTGATCATTACCTTGGATTAGGAACCGCTGTTAGTCAGTACAAGACACCAAGATGTGTTGGTTCTTCA AACAGCAGAGTGTTGCAAATCTTGTGTGACAATGTTGTTAAGAACTATCTCAGTACTGCTTTCAATTGA
Protein sequence (LotjaGi1g1v0790400.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLEKVGEFYNMDKVIEEFESLTKDAGKVQRETLKRILEDNASAEYLQNLGLNGRTDPDSFKACVPMVTHKDLEPYIYKII DGESSSILTGKPITTMSLSSGTTQGKPKYLPWNDELFETTMQIYKTSFAYRNREFPMKNGKALSFIYGSKQFKTKGGLVA RTATSNLFRSPGYKHAMKALQSQCCSPDEVVFGPDFFQSLYCHLLCGLIFREEVQLVSSTFAHSIVHAFRTFEQVWEELC TDIREGVLTSRVTVPSIRMAMSKILKPNPELANLIHKECVGLSYCNWYGLIPELFPNAKYIYGIMTGSMEPYLKKLRHYA GEMLPLLTADYGSTEGWIAANVNPKLPPEMATYAVLPHIGYFEFIPLTELENDFFLCIDPNPVGLTEVKIGEEYEIVMTN PAGLYRYRLGDVVKVMGFHNSTPELKFVRRSSLLLNINIDKNTEKDLQLAVEAAAKFLAEERVEVVDFTSHVDLTTEPGH YVIFWEISGEASEKLLSECCNCLDKSFIDAGYTSSRKVNCIGPLELRVVRRGTFQKVLDHYLGLGTAVSQYKTPRCVGSS NSRVLQILCDNVVKNYLSTAFN
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 7 | 581 | 575 | 0.0 | – | |
| PANTHER | 7 | 581 | 575 | 0.0 | ||
| Coils | 11 | 31 | 21 | - | – | |
| Pfam | 17 | 559 | 543 | 1.2E-188 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0790400.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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