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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0001300 |
| Transcript ID | LotjaGi2g1v0001300.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Trehalose-6-phosphate synthase; TAIR: AT1G68020.2 UDP-Glycosyltransferase / trehalose-phosphatase family protein; Swiss-Prot: sp|Q94AH8|TPS6_ARATH Alpha,alpha-trehalose-phosphate synthase [UDP]-forming] 6; TrEMBL-Plants: tr|A0A072VR84|A0A072VR84_MEDTR Trehalose-6-phosphate synthase domain protein; Found in the gene: LotjaGi2g1v0001300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:924832..929694) extracted from Lotus japonicus Gifu genome v1.2.
AAAACAAGTGAGCATTCAAAACTGTTGTCTAGGTTCAGTGGAAAGAGAGAGATAATATGGGTTGGGTTTGGGTTTTGGGA TGGGTTGGGTGAACATTGTGATCAGTGATAACTGATAAAGCTCTACTAAAAGATAATAATTTATAAACTTAACTCATTTT TTATTAATTTTGTATTATAATTAATTTTGTTCTCCACTATAAAGAGTTGAGTTTTTCTCAAACCATTTATGTTGATTCCA AATCTATTTCCTTTATCCACCCACATCAAACTGAAATAGGAACTCAAGTCTCAACCAAACTGGTAAATTTTCTTCAACTG TTTGTCAATTCCATTTGGGTTCTTGTTTTTATTGTTATCTTTTCTATGCCCCATTTGCTGCTACTCTAGTCTCTTTGTTT CTGACTTTCAACAAGTTAGTTCAGAGTCAATTTATGACACCAATCTCCGGTGAGTTGTTTGGTTGCTGTTTCCTGTTTGT GTGATCTGAATCTGTTCCATTCATTTTGTTCTCTAATCATCTCTCTCTTTCTTTCTTGGTTGCAAATCAATAACCACTAC ATGTTTTATCTGCCCCTTGCTCTGTTCTCCATTTTGATGCTTTCTCTTGTTGCTGCTCATCACAGATTCACCACCTGCAC CTCTTGCCATTTCATGCTTTGTAACTTCTCATTCATTCAATTTAGGACTAGTATTAGCTGACCCACAATTCAAAACATAG TTTTTTTCACTTTGCACTCTCTGTTCTTTGCCCATTTGGTTGATTTGGATTTGCCCTAGGACCTTGTTTCTATGATGATT ATTATGGTTGATTTCCTCCTGATACTGTGCTATTGAGAATTACCTTGGATTGGAAATTTGAACTTGTTTGTTATGTGGGT AATGTATAGATATTGTTACAAAGCTTTGTGTTAACTTGGGGTTTTACCAGAATGGTGTCTAGATCCTATTCAAACCTATT GGAGCTGGCTTCTGGTGAGGCCCCATCATTGGGGTTCATGGACAGGAGAATTCCAAGGATTATGACTGTGGCTGGATTGA TATCTGAAGTCGATGATGACCAGAGTGAGTGCTCTGATCGGTCCTCTTCGTCAGCGGCGCACCGTGACCGACTAATAATG GTGGCAAATCAGCTACCCATAAGGGCTCAGAGGAACCCAGATGGTTATAACAGGAATTCATGGTCTTTTGAGTGGGATGA GAATGCACTTCTTCAATTGAAAGATGGGTTCGGTGATGATAATATTGAGGTTATCTATGTTGGATGCCTCAAGGAAGATG TGCACCCAAATGAACAAGAAGAGGTTTCACAGATTCTTCTTGAGAGCTTCAAGTGTGTCCCAACTTTTCTCCCACCTGAA ATGTATACCAGGTTCTATCATGGCTTTTGCAAACAGCAATTGTGGCCACTGTTCCATTACATGTTGCCTCTTTCACCTGA ACTTGGTGGCAGGTTTAACAGGACGCTGTGGCAAGCTTATGTCTCAGTTAATAAAATTTTTGCAGATAGAATCATGGAAG TTATCAACCCTGAAGATGATTATGTGTGGATACATGACTATCATCTAATGGTGTTGCCAACTTTCTTGAGGAAGAGATTT AACAGGGTGAAGCTCGGATTCTTCCTTCATAGCCCATTCCCTTCCTCAGAAATATATAAAACATTGCCTGTGAGGGAAGA GCTCTTGAGGGCCCTCCTCAATTCAGATTTGATTGGGTTCCATACTTTCGATTATGCACGGCATTTCCTCTCATGTTGCA GCCGGATGCTAGGTCTGACGTACGAATCGAAGCGAGGCTATATTGGGATTGAGTATTATGGCAGGACTGTTAGTATCAAG ATTCTTCCTGTTGGGATACACATGGGCCAGCTTCAATCGGTTCTGAGGATGCCGGAGACTGAAAAGAAAGTTTGCGAGCT CATTAGACAGTTTTCTGATCAAGGAAAGACAATGTTGCTTGGGGTGGATGACATGGATATTTTCAAGGGAATAAGTTTGA AGCTTTTGGCCATGGAGCAGCTTCTGATTCAGCACCCTGAGTATCAGGGAAAGGTAGTGCTGGTTCAGATAGCGAATCCT GCGAGGGGAAGAGGGAAAGATGTGAAAGAAGTGCAAGAAGAAACGAAGGCCACTGTGAAACGGATTAATGAAACGTTCGG GATACCAGGGTATGTTCCTGTTATTCTGATTGAGGAGCCACTCAAGTTTTATGAAAAAGTTGCTTACTATGTTGCTGCTG AGTGTTGTTTAGTCACTGCAGTGAGGGATGGAATGAATCTGATACCATATGAGTATGTAATCAGTCGTCAAGGAAATGAA ACATTGGATAAAGTTTTGGGGCTAGCTTCCTCCCCTAAGAAGAAAAGCATGTTGGTTGTGTCTGAGTTCATTGGATGTTC CCCATCTTTAAGTGGAGCAATCAGAGTGAACCCGTGGAACATCGATGCGGTAGCAGAAGCGATGGACTATGCACTGTTAA TGGCTGATGCAGAGAAGCAGTTGAGGCATGAAAAGCATTATAGATATGTTAGTACTCATGATGTCGGGTACTGGGCTCGG AGCTTCTTACAGGATTTGGAAAGGGCTTGCAGTGATCATGGACGAAGACGGTGGTGGGGAATCGGGTTCGGATTAAGTTT TAGAGTTGTAGCACTTGATCCAAACTTTAGGAAGCTCTCAATGGAACACATAGTTTCAGCATACAAGCGCACAACAAATA GGATGATCCTTCTAGACTATGATGGCACACTAATGCCTCAGGCTTCTATGGATAAGAGCCCAACTAGTCAATCCATTGAG TTTCTTAATAGTATGTGTAGAGATAACAATAACATGGTGTTTCTTGTTAGTGCTAGAAGCCGAAAGGCGCTTTCTGCATG GTTTTCTCCTTGTGAGAATCTGGGACTTGCGGCTGAGCATGGTTACTTTATAAGGTAGATTACTTAAGCCTCTAAGCTTT TCAAGGTTGGTGCTTTGCTTTCATGGGGTTAGATAATGACTGACGTTGCTTTTTTATATGATGTGTGGTTGCAGAATGGA CCGAGACGCCGAATGGGAAACCTGTGTTGCTGCAACAGATTGTAGTTGGAAACAAATTGCACAACCTGTAATGAAGCTTT ATACTGAAACAACTGATGGGTCTACCATTGAAGATAAGGAGACTGCACTTGTTTGGTGGTATGAGGATGCGGATCCCGAT TTTGGGTCGTGCCAAGCTAAGGAACTTCTTGATCATCTTGAGAGTGTGCTGGCAAATGAACCAGTAACCGTCAAAAGTGG CCAGAGTTATGTGGAGGTTAAACCACAGGTGTGTATAACATACTATGAATGAGTTGTAGCCATAGATTCATTTGTTTATT GCCTAATAATTCCAGATGAAAAACTGGTGGGTATGTTATACAAACTAATTTCATATTAGGACATAATTTAAAACAAAATT CATTGTTGAAATTGGAGTAATCAATAAAGGTATAATAAGATAGGTTTAGGAGAAATGAAGAGTAGCTATTGAAAGAAGCA AAGCTTTTACTTAGTCCACTTTTAAATTGTGAACTTTGATTATAGTCTATAGTTATCCATATGTAGATGCTAGTAAAAGC ACTCAATTTCTTTTACCTGAATGGAACTTGCGTACAATAATATAAAAGGAAACCAAGTTAAGAAATGTTTTTTCTAGAGC TTGCTTTATTGTGGAACTGCAATGAAGATCCACTCCTGAATTTTTTCTCTTCTTTTATGGATATGTTTTTGTAAATTGCT AAATTTTACTACTTCTATTCCTGGTCATATAGTTTTAGAGTTCTTTAATTGATAGTATAATTTGGCTAAATTACCGGTTT TTAAAACGTCAATTATGTTAAAGAGAGAGAATAAAAGTAATTGGTTGAGTAATTGTTGAGAATGGTGATAGGTGAAAATA AGAAGCGATGAGTGAGATATAGTTATTGTTATCGGTGTTTTATTAATATATGTTTGTACATGCAGGGTGTGAGCAAGGGA CTAGTGGCCAAACGCCAACTTTCTGCCATGCAAGAAAAGGGAATGTCACCTGATTTTGTTCTGTGCATAGGCGATGACAG GTCTGATGAAGACATGTTTGAGGTAATCACCAGTTCAATGAACGGTCCGATCGCACCGAGGGCTGAAGTTTTCGCGTGTA CTGTTTGCCGAAAACCCAGCAAGGCTAAATACTACTTGGATGATACAGCAGAAATAGTGAGATTGATTCAGGGTTTAGCC TGTGTTTCAGACCATTCAGTTTTATGCTCCTTAGTATCGTATGCTGCTCCTTAAATGTTTGATTATTTTCAGGAAAACTT GTACATATATTTGGTTTTCACCCTTGAATTCTGTTTTGCATTTCTTAGTGAACATGGTGCTGCTTATTTCAAACTTATAC TGTTTTTTGAAATGGTACTAGTTTTATTTATAGTATTAACTAAAATTAAACTCGCGTGTTGTGCGGTCGCCTTAACCTTG ACTTTGGTTGCCAGTTTCTTTGTAGTGAAAAACTGAAAACTATAAAATGTTAAAATCCAGAGCTTTTCAAAGAAAAATTA AGGGAGAAGGTGTAATGGAAGTATTATTGAAGATTAGGTCTTGTTTTTAATCAATTTAATTTCATTACAGAAGTATTGTT TTCTTATATAGTAAGCATTATTGAAGTTTCCTTCTTGGAAGTAGGATCATTAACTGTGGATGTGTGGGTTTGAGAAATAG ATTGAAGTTGTGATGAAATGCATGTAAAATACTCTAAGAGCATCTCCAAATGAGTATGTGGGAATAGATAGTCTACACTA GACTTGAAAAGTGAGCTTGTATTTATTACAAACACTTACAATTAATATAATTAGATTAAGTTG
CDS sequence (LotjaGi2g1v0001300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTGTCTAGATCCTATTCAAACCTATTGGAGCTGGCTTCTGGTGAGGCCCCATCATTGGGGTTCATGGACAGGAGAAT TCCAAGGATTATGACTGTGGCTGGATTGATATCTGAAGTCGATGATGACCAGAGTGAGTGCTCTGATCGGTCCTCTTCGT CAGCGGCGCACCGTGACCGACTAATAATGGTGGCAAATCAGCTACCCATAAGGGCTCAGAGGAACCCAGATGGTTATAAC AGGAATTCATGGTCTTTTGAGTGGGATGAGAATGCACTTCTTCAATTGAAAGATGGGTTCGGTGATGATAATATTGAGGT TATCTATGTTGGATGCCTCAAGGAAGATGTGCACCCAAATGAACAAGAAGAGGTTTCACAGATTCTTCTTGAGAGCTTCA AGTGTGTCCCAACTTTTCTCCCACCTGAAATGTATACCAGGTTCTATCATGGCTTTTGCAAACAGCAATTGTGGCCACTG TTCCATTACATGTTGCCTCTTTCACCTGAACTTGGTGGCAGGTTTAACAGGACGCTGTGGCAAGCTTATGTCTCAGTTAA TAAAATTTTTGCAGATAGAATCATGGAAGTTATCAACCCTGAAGATGATTATGTGTGGATACATGACTATCATCTAATGG TGTTGCCAACTTTCTTGAGGAAGAGATTTAACAGGGTGAAGCTCGGATTCTTCCTTCATAGCCCATTCCCTTCCTCAGAA ATATATAAAACATTGCCTGTGAGGGAAGAGCTCTTGAGGGCCCTCCTCAATTCAGATTTGATTGGGTTCCATACTTTCGA TTATGCACGGCATTTCCTCTCATGTTGCAGCCGGATGCTAGGTCTGACGTACGAATCGAAGCGAGGCTATATTGGGATTG AGTATTATGGCAGGACTGTTAGTATCAAGATTCTTCCTGTTGGGATACACATGGGCCAGCTTCAATCGGTTCTGAGGATG CCGGAGACTGAAAAGAAAGTTTGCGAGCTCATTAGACAGTTTTCTGATCAAGGAAAGACAATGTTGCTTGGGGTGGATGA CATGGATATTTTCAAGGGAATAAGTTTGAAGCTTTTGGCCATGGAGCAGCTTCTGATTCAGCACCCTGAGTATCAGGGAA AGGTAGTGCTGGTTCAGATAGCGAATCCTGCGAGGGGAAGAGGGAAAGATGTGAAAGAAGTGCAAGAAGAAACGAAGGCC ACTGTGAAACGGATTAATGAAACGTTCGGGATACCAGGGTATGTTCCTGTTATTCTGATTGAGGAGCCACTCAAGTTTTA TGAAAAAGTTGCTTACTATGTTGCTGCTGAGTGTTGTTTAGTCACTGCAGTGAGGGATGGAATGAATCTGATACCATATG AGTATGTAATCAGTCGTCAAGGAAATGAAACATTGGATAAAGTTTTGGGGCTAGCTTCCTCCCCTAAGAAGAAAAGCATG TTGGTTGTGTCTGAGTTCATTGGATGTTCCCCATCTTTAAGTGGAGCAATCAGAGTGAACCCGTGGAACATCGATGCGGT AGCAGAAGCGATGGACTATGCACTGTTAATGGCTGATGCAGAGAAGCAGTTGAGGCATGAAAAGCATTATAGATATGTTA GTACTCATGATGTCGGGTACTGGGCTCGGAGCTTCTTACAGGATTTGGAAAGGGCTTGCAGTGATCATGGACGAAGACGG TGGTGGGGAATCGGGTTCGGATTAAGTTTTAGAGTTGTAGCACTTGATCCAAACTTTAGGAAGCTCTCAATGGAACACAT AGTTTCAGCATACAAGCGCACAACAAATAGGATGATCCTTCTAGACTATGATGGCACACTAATGCCTCAGGCTTCTATGG ATAAGAGCCCAACTAGTCAATCCATTGAGTTTCTTAATAGTATGTGTAGAGATAACAATAACATGGTGTTTCTTGTTAGT GCTAGAAGCCGAAAGGCGCTTTCTGCATGGTTTTCTCCTTGTGAGAATCTGGGACTTGCGGCTGAGCATGGTTACTTTAT AAGAATGGACCGAGACGCCGAATGGGAAACCTGTGTTGCTGCAACAGATTGTAGTTGGAAACAAATTGCACAACCTGTAA TGAAGCTTTATACTGAAACAACTGATGGGTCTACCATTGAAGATAAGGAGACTGCACTTGTTTGGTGGTATGAGGATGCG GATCCCGATTTTGGGTCGTGCCAAGCTAAGGAACTTCTTGATCATCTTGAGAGTGTGCTGGCAAATGAACCAGTAACCGT CAAAAGTGGCCAGAGTTATGTGGAGGTTAAACCACAGGGTGTGAGCAAGGGACTAGTGGCCAAACGCCAACTTTCTGCCA TGCAAGAAAAGGGAATGTCACCTGATTTTGTTCTGTGCATAGGCGATGACAGGTCTGATGAAGACATGTTTGAGGTAATC ACCAGTTCAATGAACGGTCCGATCGCACCGAGGGCTGAAGTTTTCGCGTGTACTGTTTGCCGAAAACCCAGCAAGGCTAA ATACTACTTGGATGATACAGCAGAAATAGTGAGATTGATTCAGGGTTTAGCCTGTGTTTCAGACCATTCAGTTTTATGCT CCTTAGTATCGTATGCTGCTCCTTAA
Protein sequence (LotjaGi2g1v0001300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVSRSYSNLLELASGEAPSLGFMDRRIPRIMTVAGLISEVDDDQSECSDRSSSSAAHRDRLIMVANQLPIRAQRNPDGYN RNSWSFEWDENALLQLKDGFGDDNIEVIYVGCLKEDVHPNEQEEVSQILLESFKCVPTFLPPEMYTRFYHGFCKQQLWPL FHYMLPLSPELGGRFNRTLWQAYVSVNKIFADRIMEVINPEDDYVWIHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSE IYKTLPVREELLRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGIEYYGRTVSIKILPVGIHMGQLQSVLRM PETEKKVCELIRQFSDQGKTMLLGVDDMDIFKGISLKLLAMEQLLIQHPEYQGKVVLVQIANPARGRGKDVKEVQEETKA TVKRINETFGIPGYVPVILIEEPLKFYEKVAYYVAAECCLVTAVRDGMNLIPYEYVISRQGNETLDKVLGLASSPKKKSM LVVSEFIGCSPSLSGAIRVNPWNIDAVAEAMDYALLMADAEKQLRHEKHYRYVSTHDVGYWARSFLQDLERACSDHGRRR WWGIGFGLSFRVVALDPNFRKLSMEHIVSAYKRTTNRMILLDYDGTLMPQASMDKSPTSQSIEFLNSMCRDNNNMVFLVS ARSRKALSAWFSPCENLGLAAEHGYFIRMDRDAEWETCVAATDCSWKQIAQPVMKLYTETTDGSTIEDKETALVWWYEDA DPDFGSCQAKELLDHLESVLANEPVTVKSGQSYVEVKPQGVSKGLVAKRQLSAMQEKGMSPDFVLCIGDDRSDEDMFEVI TSSMNGPIAPRAEVFACTVCRKPSKAKYYLDDTAEIVRLIQGLACVSDHSVLCSLVSYAAP
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 851 | 851 | 0.0 | – | |
| PANTHER | 1 | 851 | 851 | 0.0 | – | |
| Gene3D | 51 | 319 | 269 | 4.4E-76 | – | |
| SUPERFAMILY | 59 | 553 | 495 | 1.19E-148 | – | |
| Pfam | 60 | 550 | 491 | 7.9E-182 | ||
| CDD | 60 | 550 | 491 | 0.0 | – | |
| Gene3D | 320 | 535 | 216 | 1.5E-72 | – | |
| TIGRFAM | 596 | 843 | 248 | 2.5E-35 | ||
| Gene3D | 596 | 705 | 110 | 8.1E-13 | ||
| SUPERFAMILY | 597 | 844 | 248 | 2.75E-45 | ||
| TIGRFAM | 598 | 800 | 203 | 1.5E-19 | ||
| CDD | 599 | 838 | 240 | 1.07218E-63 | – | |
| Pfam | 600 | 833 | 234 | 5.2E-73 | ||
| Gene3D | 726 | 852 | 127 | 5.6E-18 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. | ||
| Biological process | Trehalose biosynthetic process | The chemical reactions and pathways resulting in the formation of trehalose, a disaccharide isomeric with sucrose and obtained from certain lichens and fungi. |
Expression pattern of LotjaGi2g1v0001300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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