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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0004800 |
| Transcript ID | LotjaGi2g1v0004800.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein OBERON 3; TAIR: AT1G14740.1 class I heat shock protein, putative (DUF1423); Swiss-Prot: sp|Q94B71|OBE3_ARATH Protein OBERON 3; TrEMBL-Plants: tr|I1K3D1|I1K3D1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0004800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:1766804..1770525) extracted from Lotus japonicus Gifu genome v1.2.
CTTCAGTGGCGTTAAGGAATAAAAACACCCGAGATTCTCGCCTATTCTCGGAATTATCCCTGTTTTGTGTGTCTCAACTG TTTTGGTCTTAGTCTCTGGTTTCTGTTATTCGCTTATTGTCTTTGCCTTTGTTGAGTTTCATTGTCTCTCTTTCTCCTTG TCAGGTTCCATCCACCATGATTGGAGGAGGTAAAGATCTTCTTCCCAATGGTGTTGACTCTGATGGGGATAACTCAAAGA GCAAAGGGTCACAGCACCATGATTTTGAATACCAAAAGGAGAAAAAACCAGAGAAAGGTGTTGATTATCTGAAAAATTCA GATGTTGGTGTTAATGGGTTTCAGTCAATTTCCACAAAGGTTGGGAATTCTGGGTTGCAAGAGTTGACCTTCAGCTACCT CTGTGATAACCAAAAATTGGGCCTTGCTGAGAAAGACAAAGATAGAAGCCTGCTGAATTCATTGGAGAAAGGGACTTACA AAGGTAAAGAAGTTGTTGTTTCTGAAAATTCCAATCAGGATGAGAAATGGGTAGAAAGAGATTTTCTTAGTTTGAGTGAA ACTAGGGAGAATTCTTCAAAGAGAATCATTGAGGAAAAGTGTGTAAGGGAAGAAGATAAGGGGAAGAAGCAAAAGCTTGA GACGCTTAATCTCTCTCTTGCTTTGCCTGATGTGGCACTTTCTCTCACAGCTTCAAAAAATGGGGATGGTCAAAAACCTT TTAGGCCAAAACCTAGCAAGCCTTCAACTACTACAATCAATTCATGTTCAAATGATTACACAGCAGCTTCTTTGTCACAC TCTTATTCTCACCCTTTTTCACACAACCCAAGTTGCTCATTTACCCGTAATTCGACAGAGAATTTTGAGTATTCACTCAG CAAAGATAATCCAATTTGGTACTGCGGGGAAGGGACTAATGGATCAGTTCATAGCAGGTTCAAGCCAATAGGAGATGGGG TTGCTTTGGCCAATCATGGTGGTGGGACTAGTCAGTTTAAAGCTACTAGTTCTGATAATAACCATTCGATTTTCCCCTCA GAATTGCCTGCTAGGCCTAGATTTGAAGCTCAACAATCAGAGGGCTCAAGGGGCAAGAATTCTGAGAATCTGAGAGAAAT TGGGAAGATTTCTAGACCTGAGAGAATTCTAAGAGAAATTGTTTCTGAGTCAATTCCCGCCATGGCACTAACATTTCAGG AGTTCACTGATGATGTGGTGGCATCAATTAAGGAGTATTTGAAAAACCTCATTGAAATTCCAGGTGGGAAAGAAGAATTT GTGAACCTTCGGAACCGGCTTGAGAGAAGATCTGACCTTACCAAAGAAGCTCTTTTGAAGTGCCATAAAGAGCAATTGGA GATTTTAACTGCCATCAAGATGCGGCTTGGAAGTTTCTTATCAGGTAAGTTTCAATTCTCTGACATGGTGGAGGTTTTCT TGTTTATGAGATGTAGAAACTTGAACTGCAAGAGCTTGCTTCCTGTTGATGACTGTGACTGCAAGATTTGCTCTGGAAAT AAGGGATTTTGCAGTTCTTGCATGTGTCCTGTTTGTTTGAGCTTTGATTGTGCAAGTAATACTTGTAGTTGGGTTGGTTG TGATGTTTGTTCCCACTGGTGTCATGCTGCCTGTGCCATTGAGAGGAATCTAATCAAACCCGGGCCAAGCTTGAAGGGTC CTTCAGGGACCTTTGAGATGCAGTTTCATTGTGTTGGCTGTGGACACCCTTCAGAAATGTTCGGGTTCGTTAAAGAAGTC TTTCTGTGCTTTGCTAAGGATTGGAGCCTAGAAACGTTGATGAAAGAGCTTGACTGTGTAAGGAAGATTTTCCGCCCAAG CAAAGATCGCAAAGGGAAGGAATTGCACATCAAGACAGATGATATGTTGTTGAAGCTTCAAGCTAAACTGGTATCTCCTC GTGACGCCTGCAAGTACATCATACATTTTTTCAGCTGTAAGTCTCTATGCTGTGATCTTTCATACACATTTTATCCAATC ATTAAAATCTTGTGTTACTCACACCATACATACAGGGACGGAATGAGGAAAAATGAGTAAGGAGGAGAAATTCAACACAC TAAGTAAAATATAAAGAATGACTAATTGAACAAGATACTATAAATTTTTCTTTGGGTTTTTTCTTTGGGGTCGAATACAA CATTTGAATACCACTTTATTGAGAACTTTTTCTTTTGGGGGACGACCAACCCATTTTTAATGTACTGCGGTCCATCCCTG CATACATACAACACTTAAATAGGAGTTATATGCACAATGAGTATATGATGCTTTGGGTTTGAGTCACTTCATATACTAAC TAATAGGATCCTTAAACTGTATATATTGTTGAATTAGGTGCATGAAAACATATTCTCATAACTGGAAGGTATTGCTGTTC TTCTGATACTTAGTGGAAGTGTATGAAAATGCAATGGCCTGTTTTTCTCTGTATTCTAAAAGCATTGTCAATAAGGAAGA CATTTATCTGACGCGGTTGTGATACTACATTACCGCTGGTATATGAAGTTTTTTTTTTGAAGTAATAATAACAGACAACG AGACCAGCACATACTCGCTTTTTAACCAGCAGATACCAAATTCATGTTTCTCTCCTTGGACATAGTAGCTATATCTTAGA ATAGATATTTAGAACTGAATCAATTCCAGTCACCTTACAATTGCATCACTGCAGTGATCATTTACCTTCTTCCTTTTTAT TACAACCATTGTTGTTCTTTTGAATGCATTCATTTAAAGGATTGAATACATCACCAATAGATGATAGTTTGATTTAATAA TTCTGATCTGTGATATCTAACTTCCTAGATTGTTTTTTCCTGACTAATAGATGCGGATGCCTTGTCCGACATTTCTTCTT CTGGTATATCTTCAAAGGATTTGTCAGCATCTCAGGCTAACCTCACAATGGAGGCACCACCATTTTCACAATCTACTTCT CTAAAATATACTTATGAGTTGAGTCATTCTAAGTCAAATGATCTCCATCAGAAAGACTTCAAAGCCTCAATGTCAAGTGG ACTGAAAAATGAGACTGATTTTGACTTGGATGATTTGTTAAGGAAAGGTGGGCTTGAAAGCTTGGAGAGCATTGTGAGGA TAAAGGAGGCAGAAGCCAGAATGTTCCAGACCAAGGCAGATGAAGCGAGGAGAGAGGCAGAAGGGTTCCATAGGATGATC AAGACAAAGGCAGCGCAAGTGGAAGAAGAGTATGCTGAACAGCTTGGAAAACTGAGTTTGCAAGAGACGGAGGAAAGGCG GAGGAAGAAATTAGAGGAGCTCAACATGTTGAAAAATTCCCATTTTGATTACTTCAAAATGAAAATGAGAATGCAAGATG AGATTGATAGTTTGTTGAAGAGAATGGAGGTAACAAAGTAGCGATGTGTTTAGGATTTGTTGTTATTTTTCTTCAAAAAA TTATATATTTATTATTTTTCTAAGAATCTGGATAATGTATTTAATTTGTTGATCTGCTGCAATTTCTTTTTTATTCAGAA TAGATAACCTTTTTTTTGATAAATTCAACCATTGAGATTTTTGTAAGGGTTGATTGCTATGTAAGTCTCATTTTGCTAAT GTTGATAATAAGTATTGAAAAAGGTAAAGTTATATATTTTAGAAAGTTGACAGGAGTTCTCGCTTGATAGTCACGCAATT GCTGGTGTTCGAGAGCCGGTCTCTTCCAAATACTCAATTGCC
CDS sequence (LotjaGi2g1v0004800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATTGGAGGAGGTAAAGATCTTCTTCCCAATGGTGTTGACTCTGATGGGGATAACTCAAAGAGCAAAGGGTCACAGCA CCATGATTTTGAATACCAAAAGGAGAAAAAACCAGAGAAAGGTGTTGATTATCTGAAAAATTCAGATGTTGGTGTTAATG GGTTTCAGTCAATTTCCACAAAGGTTGGGAATTCTGGGTTGCAAGAGTTGACCTTCAGCTACCTCTGTGATAACCAAAAA TTGGGCCTTGCTGAGAAAGACAAAGATAGAAGCCTGCTGAATTCATTGGAGAAAGGGACTTACAAAGGTAAAGAAGTTGT TGTTTCTGAAAATTCCAATCAGGATGAGAAATGGGTAGAAAGAGATTTTCTTAGTTTGAGTGAAACTAGGGAGAATTCTT CAAAGAGAATCATTGAGGAAAAGTGTGTAAGGGAAGAAGATAAGGGGAAGAAGCAAAAGCTTGAGACGCTTAATCTCTCT CTTGCTTTGCCTGATGTGGCACTTTCTCTCACAGCTTCAAAAAATGGGGATGGTCAAAAACCTTTTAGGCCAAAACCTAG CAAGCCTTCAACTACTACAATCAATTCATGTTCAAATGATTACACAGCAGCTTCTTTGTCACACTCTTATTCTCACCCTT TTTCACACAACCCAAGTTGCTCATTTACCCGTAATTCGACAGAGAATTTTGAGTATTCACTCAGCAAAGATAATCCAATT TGGTACTGCGGGGAAGGGACTAATGGATCAGTTCATAGCAGGTTCAAGCCAATAGGAGATGGGGTTGCTTTGGCCAATCA TGGTGGTGGGACTAGTCAGTTTAAAGCTACTAGTTCTGATAATAACCATTCGATTTTCCCCTCAGAATTGCCTGCTAGGC CTAGATTTGAAGCTCAACAATCAGAGGGCTCAAGGGGCAAGAATTCTGAGAATCTGAGAGAAATTGGGAAGATTTCTAGA CCTGAGAGAATTCTAAGAGAAATTGTTTCTGAGTCAATTCCCGCCATGGCACTAACATTTCAGGAGTTCACTGATGATGT GGTGGCATCAATTAAGGAGTATTTGAAAAACCTCATTGAAATTCCAGGTGGGAAAGAAGAATTTGTGAACCTTCGGAACC GGCTTGAGAGAAGATCTGACCTTACCAAAGAAGCTCTTTTGAAGTGCCATAAAGAGCAATTGGAGATTTTAACTGCCATC AAGATGCGGCTTGGAAGTTTCTTATCAGGTAAGTTTCAATTCTCTGACATGGTGGAGGTTTTCTTGTTTATGAGATGTAG AAACTTGAACTGCAAGAGCTTGCTTCCTGTTGATGACTGTGACTGCAAGATTTGCTCTGGAAATAAGGGATTTTGCAGTT CTTGCATGTGTCCTGTTTGTTTGAGCTTTGATTGTGCAAGTAATACTTGTAGTTGGGTTGGTTGTGATGTTTGTTCCCAC TGGTGTCATGCTGCCTGTGCCATTGAGAGGAATCTAATCAAACCCGGGCCAAGCTTGAAGGGTCCTTCAGGGACCTTTGA GATGCAGTTTCATTGTGTTGGCTGTGGACACCCTTCAGAAATGTTCGGGTTCGTTAAAGAAGTCTTTCTGTGCTTTGCTA AGGATTGGAGCCTAGAAACGTTGATGAAAGAGCTTGACTGTGTAAGGAAGATTTTCCGCCCAAGCAAAGATCGCAAAGGG AAGGAATTGCACATCAAGACAGATGATATGTTGTTGAAGCTTCAAGCTAAACTGGTATCTCCTCGTGACGCCTGCAAGTA CATCATACATTTTTTCAGCTATGCGGATGCCTTGTCCGACATTTCTTCTTCTGGTATATCTTCAAAGGATTTGTCAGCAT CTCAGGCTAACCTCACAATGGAGGCACCACCATTTTCACAATCTACTTCTCTAAAATATACTTATGAGTTGAGTCATTCT AAGTCAAATGATCTCCATCAGAAAGACTTCAAAGCCTCAATGTCAAGTGGACTGAAAAATGAGACTGATTTTGACTTGGA TGATTTGTTAAGGAAAGGTGGGCTTGAAAGCTTGGAGAGCATTGTGAGGATAAAGGAGGCAGAAGCCAGAATGTTCCAGA CCAAGGCAGATGAAGCGAGGAGAGAGGCAGAAGGGTTCCATAGGATGATCAAGACAAAGGCAGCGCAAGTGGAAGAAGAG TATGCTGAACAGCTTGGAAAACTGAGTTTGCAAGAGACGGAGGAAAGGCGGAGGAAGAAATTAGAGGAGCTCAACATGTT GAAAAATTCCCATTTTGATTACTTCAAAATGAAAATGAGAATGCAAGATGAGATTGATAGTTTGTTGAAGAGAATGGAGG TAACAAAGTAG
Protein sequence (LotjaGi2g1v0004800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MIGGGKDLLPNGVDSDGDNSKSKGSQHHDFEYQKEKKPEKGVDYLKNSDVGVNGFQSISTKVGNSGLQELTFSYLCDNQK LGLAEKDKDRSLLNSLEKGTYKGKEVVVSENSNQDEKWVERDFLSLSETRENSSKRIIEEKCVREEDKGKKQKLETLNLS LALPDVALSLTASKNGDGQKPFRPKPSKPSTTTINSCSNDYTAASLSHSYSHPFSHNPSCSFTRNSTENFEYSLSKDNPI WYCGEGTNGSVHSRFKPIGDGVALANHGGGTSQFKATSSDNNHSIFPSELPARPRFEAQQSEGSRGKNSENLREIGKISR PERILREIVSESIPAMALTFQEFTDDVVASIKEYLKNLIEIPGGKEEFVNLRNRLERRSDLTKEALLKCHKEQLEILTAI KMRLGSFLSGKFQFSDMVEVFLFMRCRNLNCKSLLPVDDCDCKICSGNKGFCSSCMCPVCLSFDCASNTCSWVGCDVCSH WCHAACAIERNLIKPGPSLKGPSGTFEMQFHCVGCGHPSEMFGFVKEVFLCFAKDWSLETLMKELDCVRKIFRPSKDRKG KELHIKTDDMLLKLQAKLVSPRDACKYIIHFFSYADALSDISSSGISSKDLSASQANLTMEAPPFSQSTSLKYTYELSHS KSNDLHQKDFKASMSSGLKNETDFDLDDLLRKGGLESLESIVRIKEAEARMFQTKADEARREAEGFHRMIKTKAAQVEEE YAEQLGKLSLQETEERRRKKLEELNMLKNSHFDYFKMKMRMQDEIDSLLKRMEVTK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 46 | 46 | - | – | |
| MobiDBLite | 20 | 44 | 25 | - | – | |
| PANTHER | 36 | 776 | 741 | 0.0 | – | |
| PANTHER | 36 | 776 | 741 | 0.0 | ||
| MobiDBLite | 172 | 194 | 23 | - | – | |
| MobiDBLite | 273 | 313 | 41 | - | – | |
| PRINTS | 339 | 361 | 23 | 3.8E-57 | ||
| PRINTS | 378 | 393 | 16 | 3.8E-57 | ||
| PRINTS | 417 | 438 | 22 | 3.8E-57 | ||
| Pfam | 426 | 549 | 124 | 1.8E-36 | ||
| CDD | 456 | 515 | 60 | 2.65909E-28 | – | |
| PRINTS | 463 | 483 | 21 | 3.8E-57 | ||
| PRINTS | 536 | 555 | 20 | 3.8E-57 | ||
| Pfam | 649 | 769 | 121 | 1.2E-40 | ||
| PRINTS | 676 | 696 | 21 | 3.8E-57 | ||
| Coils | 682 | 702 | 21 | - | – | |
| PRINTS | 715 | 737 | 23 | 3.8E-57 | ||
| Coils | 730 | 750 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi2g1v0004800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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