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LotjaGi2g1v0008600.2

Overview

Field Value
Gene ID LotjaGi2g1v0008600
Transcript ID LotjaGi2g1v0008600.2
Related isoforms 3
Lotus japonicus genome version Gifu v1.2
Description Kinase family protein; TAIR: AT4G33950.1 Protein kinase superfamily protein; Swiss-Prot: sp|Q940H6|SRK2E_ARATH Serine/threonine-protein kinase SRK2E; TrEMBL-Plants: tr|A0A0R0J4R6|A0A0R0J4R6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0008600
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr2:2878878..2882888) extracted from Lotus japonicus Gifu genome v1.2.

ATGGATCGTTTTGCGGGCACTGTTGGGTCAGGAATGGATATTCCGATCAAGATCATGCATGATAGTGACAGGTATGAGCT TGTGCGTGATATTGGGTCTGGGAATTTTGGTGTGGCTAGGCTCATGAAGGACAAACACACTGGGGAGCTTGTTGCAGTCA AGTATATTGAGAGAGGTGATAAGGTTTGAGCCTAATTTGTCTATACTTCTCTCTTTTTGTTGTTGCTTGCTAAGTTCTGG TTTATGGGTATGTGGGTGGAAATTTGGCAATTGAGTTATTGGTTTTCACTTTTCATGTCAAAGATCACTTTTTCAGAAGG TATTGATTGATTGGTTTTTTTTTTTTTTTTTTTTTGTAATTGTCTTTGATGGAATGGATGTTTTTGATGGTGGGTGTTTT AGTTTTGAGTTGGATAGGGCAAAATAGGTAGTGATTATTTCATGGTGGTATACATATCTTGGTTTCAGTCTTTTTAAGAA TTCAGCTCCATATGTGTCTGCCCTCTTGAGTCATAGTGTTGATTTTGTTAGACTTGTATACTTGAATGTGAAACTAGTTT TGGTTTCTCTCCTCAATTGAGCTCATAGCATGTGTGGAAATCGTTCTACAATTGATTTTAATTAGAAATCAATTCTAGGG AGAAAGCTTCTTCTAGATGCTATAATTAGAAATCAATTCTAGGGAGAAAGCTCATAGAATTCTTTTTTATTACGTGCACA TGATGATCAATTTGATTTTTTGTAATGTTTTAGCCTAATTCTAAACATTGGTTGTGGTTGTAAAATTGAAAGTAATATTG CTCTTGTAAGCTTGATGGCAGGCCTTAACTTGATTGCCTTGATTCAGTAACCCATATTTGCACCTCTATTCCCCCTTACA AGGAAGCTTATTTCCTCTACTCTGACAATCTCAATGATTTTTGTGTTTGTGGGCTTGAATTAATTGAAGTTTGGAAGAGT TGCATGAATACGATTTTTTCTGCTTGATTTTGAGCTTTACCGTACTTATTTTTTTTAACAGATAGATGAAAATGTACAAA GGGAAATTATAAATCACAGATCACTGAGGCATCCCAATATTGTCAGGTTCAAGGAGGTTTGTACTCTTTACACTGTACAC ATCCAATCTTCCTACCTGAGATGCATTTTAATTAGTTCTCATACTGTGAAAATATAGGTAATACTGACCCCTACACATTT AGCTATCGTGATGGAATATGCTTCTGGAGGAGAGCTATTTGAGCGAATATGCAATGCAGGGCGGTTCAATGAGGATGAGG TTCTTATCTATGGAATTCAAGCATTTTTGTTGAGGTACTGCTATTGCAGTTCCCTCTAATGCCTATTATACTGTCCTGCA GGCACGCTTCTTCTTCCAACAGCTTATATCTGGTGTTAGCTACTGTCATTCAATGGTATGTGAGTTCACCACATCTAGTG CATGTTTGGAAATTCTTCTAAAATTGATTTAAAGCCAAAATCAATTATGGAGAGAAACTTCGGTGAGTAGCTTTTGGGTG CCATAATTGATTCTGAAGAAAGAGAAGTTAATCCAAACATGCTATTAGTCTTTAACTTTTACAACAGCACATTTGCGACC CAAAAGATATAGTGAAATGTCTTACTAGAATATCTCTCTTTGTCTTCTCTAATATAGCAAGTTTGCCATCGTGACTTAAA GTTGGAGAACACATTGCTTGATGGTAGTCCAGCTCCGCGTTTGAAGATTTGTGATTTTGGTTATTCAAAGGTATACTTTC CTTCTTCATTCTGTTGATATCTTCAGGTTCATAGTACCTGCATTCCAGATTATTGCAATTGTATTTGAACTGAGCGCTAT TAAAAAAGTTAATTAAACTTCTATTTTCCACCAAGATCTCGCAAATTTCTTTGTTCGTCCTTTACCTGGGGTGGATTATT TGTGATATCTATGATGCAAAGTTTGACTCTTCTTTTTTGCAGTCCTCAGTCTTACATTCACAACCAAAATCTACAGTTGG TACCCCTGCATATATCGCTCCTGAAATTTTGCTTAAGAAGGAATATGATGGCAAGGTATTTGGTAACTTCAATCTCCTGA AGAAAATTCATCTAACTAGTGAATTCTGAGAATTTCAGTTGAGATGTTCTTTATTTTAGCTCTGTGCTTTAGCATGTTTT GTTTATGTTGTAGTTTTATCTTTACCTTGGCCATTTTACTTATAACTTCCATTTTGTAAATTGGCATTTGTGACGACAAT CACTTGTTAATTGGTTCAATGAAAGACTCACTATTAACTGATAGTTCTAGTTTCACCTCAGAAAAACTAGAAAGATATGT TGTACAATGATCAGTGTTCTTCCTCAACCTCTGGATCTTGGTCAGCAATTCCTACTCAAGGATGCATGGTGGTGCTCGGC TATAAGGATGGATGGAACAAGGCGGAGCACTGTAACTGCAAAAGGCATTTCGACGCTCAAGTCAGACAAGTGTGATTAGA GTATAAGGAAGATCAATAGAGAGCATAGAGTCTACCTTTCTTTGTAATGATAGTATTTATACCTGGTTCATACATGGGAC TTCTTTGTCTCATCGGCTACTGAGCAGTAACCGCTTGCCAGCATGGCATAACTGTTTGCCCCCGTGGCATAATCACCTAA TCATTGATTAAATGGCCTAACCAACCTTGCATTGCTGGCATAACTGATTTGTATAGCCGTCTTCCATGCGTCAAGTCTGA CCCTGGCCCAGCAATGAACAGGTCAATTGGGCCTTAACTCTTTGGGCTGGCTGGCCGGATCTCGACCTAGAACAATCAGG AATATAATTGGATTGTCACTTGTTTAGCCTCATCCAACGTGTTTAGGTCATTTGGTTTGTTCTAGACTTTGGTTACCAAC TGGAGTTGATGTTTTAGTATCCATTGGAGAAAGACCTACCATAATGGTCAATGTAAAAGTATTTCTCACCTTAACCAAAT ATTCACCTCCTCCTTCTCCAAATAAATGAAGAAAAACAACTGTAGAGAATGGAAATATTTTTCTATTTAAGACTCATTGC ACCTGCTGTTTGTATCCCCAATGTGAATGTTTCTTTTCTTCTTATTACTTTTTCTTTGTACGTTTGTGTTGAGTGGCAGC TGCGTTGAGAGGGAAATTTCCATAAACATCAGAGTAATGCATAAGCACTGGTTTCAGACTAGCACTTTTTTTCTTGTTTA CTAATTCTTTGTACTGATGTTGTTACTCAACTATGACTCAGCTTGCAGATGTGTGGTCTTGTGGGGTGACTTTATATGTG ATGTTGGTGGGCGCATATCCTTTCGAGGATCCTGATGAACCTAAGAATTTCCGGAAGACAATTCATGTAACCTTGCACAC CTTTTTTAGGTCAATGCAGCAATAACATTGAATTACTCTTCTGAAATCTTGGATTTTGCTTGCAGAGGATTATGAAAGTC CAGTACTCAATTCCTGATTATGTTCATGTATCTCCTGAGTGCTGTCATCTTATCTCAAGGATCTTTGTTGCAGACCCTGC ACAGGTCATTTCCCAAAACTTACGTGTTTTATTTACATAATTGAGCCCTATTGTCATATATTTCCCTTATAAAGAGTTGA AGAAATGTACACTTCTATTACATCCTCCTCTTTTGTTTCTTTTTTCCTTTTCTAATTGCTGAAGGACGATGGCATGATAT TTCAACTAGAAACTAATTTTATTTGAAGCAGAGAATAAGTATTCCCGAGATTCGAAACCATGGGTGGTTTTTGAAGAACC TTCCAGCTGATCTGATGGTTGAGAATGTGAAAATGAACAACCAGTTTCAGGAGCCTGATCAACCAATGCAGAGCAATGAA GAAATCATGCAGATAATTAGTGAGGCTACAATTCCTGCTGCCGGAACTCAGACTCTCGACCAGTATCTGACCGGTGGCTT GGACATTGATGACGACGAGATGGATGAGGACCTCGAATCCGATGCTGACCTTGAAATTGATAGCAGTGGAGAAATAGTAT ATGCTATGTAA
Download Genomic Sequence

CDS sequence (LotjaGi2g1v0008600.2) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGATCGTTTTGCGGGCACTGTTGGGTCAGGAATGGATATTCCGATCAAGATCATGCATGATAGTGACAGGTATGAGCT TGTGCGTGATATTGGGTCTGGGAATTTTGGTGTGGCTAGGCTCATGAAGGACAAACACACTGGGGAGCTTGTTGCAGTCA AGTATATTGAGAGAGGTGATAAGATAGATGAAAATGTACAAAGGGAAATTATAAATCACAGATCACTGAGGCATCCCAAT ATTGTCAGGTTCAAGGAGGTTTGTACTCTTTACACTGTAATACTGACCCCTACACATTTAGCTATCGTGATGGAATATGC TTCTGGAGGAGAGCTATTTGAGCGAATATGCAATGCAGGGCGGTTCAATGAGGATGAGGCACGCTTCTTCTTCCAACAGC TTATATCTGGTGTTAGCTACTGTCATTCAATGCAAGTTTGCCATCGTGACTTAAAGTTGGAGAACACATTGCTTGATGGT AGTCCAGCTCCGCGTTTGAAGATTTGTGATTTTGGTTATTCAAAGTCCTCAGTCTTACATTCACAACCAAAATCTACAGT TGGTACCCCTGCATATATCGCTCCTGAAATTTTGCTTAAGAAGGAATATGATGGCAAGCTTGCAGATGTGTGGTCTTGTG GGGTGACTTTATATGTGATGTTGGTGGGCGCATATCCTTTCGAGGATCCTGATGAACCTAAGAATTTCCGGAAGACAATT CATAGGATTATGAAAGTCCAGTACTCAATTCCTGATTATGTTCATGTATCTCCTGAGTGCTGTCATCTTATCTCAAGGAT CTTTGTTGCAGACCCTGCACAGAGAATAAGTATTCCCGAGATTCGAAACCATGGGTGGTTTTTGAAGAACCTTCCAGCTG ATCTGATGGTTGAGAATGTGAAAATGAACAACCAGTTTCAGGAGCCTGATCAACCAATGCAGAGCAATGAAGAAATCATG CAGATAATTAGTGAGGCTACAATTCCTGCTGCCGGAACTCAGACTCTCGACCAGTATCTGACCGGTGGCTTGGACATTGA TGACGACGAGATGGATGAGGACCTCGAATCCGATGCTGACCTTGAAATTGATAGCAGTGGAGAAATAGTATATGCTATGT AA
Download CDS Sequence

Protein sequence (LotjaGi2g1v0008600.2) extracted from Lotus japonicus Gifu v1.2 Proteins.

MDRFAGTVGSGMDIPIKIMHDSDRYELVRDIGSGNFGVARLMKDKHTGELVAVKYIERGDKIDENVQREIINHRSLRHPN IVRFKEVCTLYTVILTPTHLAIVMEYASGGELFERICNAGRFNEDEARFFFQQLISGVSYCHSMQVCHRDLKLENTLLDG SPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEILLKKEYDGKLADVWSCGVTLYVMLVGAYPFEDPDEPKNFRKTI HRIMKVQYSIPDYVHVSPECCHLISRIFVADPAQRISIPEIRNHGWFLKNLPADLMVENVKMNNQFQEPDQPMQSNEEIM QIISEATIPAAGTQTLDQYLTGGLDIDDDEMDEDLESDADLEIDSSGEIVYAM
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Gene3D
G3DSA:3.30.200.20
6 106 101 1.1E-32 –
PANTHER
PTHR24343:SF379
9 368 360 6.6E-214 –
PANTHER
PTHR24343
9 368 360 6.6E-214 –
SUPERFAMILY
SSF56112
16 322 307 3.1E-83
IPR011009
ProSiteProfiles
PS50011
25 287 263 47.34
IPR000719
SMART
SM00220
25 287 263 1.9E-97
IPR000719
Pfam
PF00069
25 287 263 1.2E-69
IPR000719
ProSitePatterns
PS00107
31 54 24 -
IPR017441
Gene3D
G3DSA:1.10.510.10
107 295 189 5.2E-62 –
ProSitePatterns
PS00108
146 158 13 -
IPR008271

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi2g1v0008600.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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